Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20moellendorffii_20[refseq_20GCF_5F000143415.3_202010- 07-06] 758 sequences; 212,501,708 total letters Query= NC_025456.1 Length=46547 Score E Sequences producing significant alignments: (Bits) Value seq758 618 1e-172 >seq758 Length=186484 Score = 618 bits (684), Expect = 1e-172 Identities = 722/967 (75%), Gaps = 10/967 (1%) Strand=Plus/Plus Query 19526 ACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCA 19585 ||| | || || ||||| |||||||||| || ||||||||| ||| || | | Sbjct 93130 ACCGAAAATCGCCTTTACATTGGGTGGTTCGGTGTACTGATGATCCCGACCCTGTTAACT 93189 Query 19586 GCCACCATCTGCTTCATTATTGCATTCATTGCGGCTCCACCAGTTGACATTGATGGCATC 19645 || ||| | ||||||| ||| || || || ||||| ||||| || ||||| || || Sbjct 93190 GCAACCTCCGTATTCATTACTGCTTTTATCGCAGCTCCGCCAGTAGATATTGACGGTATT 93249 Query 19646 CGCGAACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTT 19705 ||||| ||||| || ||| ||| | || || ||||| || || || || || | | Sbjct 93250 CGCGAGCCCGTTTCTGGTTCTCTTATATACGGGAACAATATAATCTCTGGTGCTATTATC 93309 Query 19706 CCGAGCAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGAT 19765 || | | | || ||||| | ||||||||||| ||||||||||| || ||||| Sbjct 93310 CCCACCTCCGCCGCTATCGGTTTGCACTTCTACCCCATTTGGGAAGCGGCATCTATTGAT 93369 Query 19766 GAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTG--GCA 19823 |||||||| |||||||| || || | | |||| | || | |||||||| ||| | | Sbjct 93370 GAATGGCTATACAACGGCGGTCCCTACGAACTAATCGTTCTTCACTTCCTGCTTGGAGTA 93429 Query 19824 TCTATGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCTTGGA 19883 || ||| |||||||| || |||||||||||||||| || | || ||| | ||||||| Sbjct 93430 GCT-TGC-TACATGGGTCGTGAGTGGGAACTTAGCTTCCGCTTGGGTATGCGCCCTTGGA 93487 Query 19884 TTTGTGTTGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTCTCGTCTACCCGT 19943 | |||||| ||||| || || |||||||||||| | || || ||| | ||||||| Sbjct 93488 TCGCTGTTGCGTACTCAGCCCCTGTTGCAGCCGCCACCGCCGTTTTTTTGATCTACCCTA 93547 Query 19944 TTGGTCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACA 20003 ||||||| || ||||||||||| | ||||||||| || ||||| || || ||||||| | Sbjct 93548 TTGGTCAAGGAAGCTTCTCCGACGGTATGCCTTTAGGAATCTCTGGCACCTTCAACTTTA 93607 Query 20004 TGTTGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGG 20063 || | || |||||||| ||||| ||||| || ||||| |||||||||||| | ||||||| Sbjct 93608 TGATCGTGTTCCAAGCTGAACACAACATCCTTATGCATCCGTTCCACATGTTGGGTGTGG 93667 Query 20064 CTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGC 20123 |||| |||||||| || || ||||||||||| ||||| ||||| |||| || | || || Sbjct 93668 CTGGCGTATTCGGCGGATCTCTATTCAGTGCTATGCATGGTTC-CTTGGTAACTTCTAGC 93726 Query 20124 TTG-TGCGTGAGACTACTGAACAGGAAAGTCAG--AACTATGGTTACAAGTTTGGGCAAG 20180 || | || || || ||||| | ||| || | ||| ||||||| |||||| || | Sbjct 93727 CTGATCCGGGAAACCACTGAGAATGAA--TCCGCTAACGCGGGTTACAGGTTTGGTCAGG 93784 Query 20181 AAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAAT 20240 |||| || || |||||||| ||||| ||||| |||||||| || || ||||||||||||| Sbjct 93785 AAGAGGAAACATATAACATTGTAGCTGCTCACGGTTACTTCGGTCGATTGATCTTCCAAT 93844 Query 20241 ACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAG 20300 | ||| || || || |||||| |||||||| ||| | ||||| ||||| || |||| Sbjct 93845 ATGCTAGCTTTAATAACTCCCGTTCCCTACACTTTTTCTTGGCTGCTTGGCCAGTAGTAG 93904 Query 20301 GGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTCAACT 20360 | || ||||| | || |||||| | |||||||| || || || ||||||||||||| Sbjct 93905 GTATCTGGTTTACCGCTTTGGGCATAAGCACAATGGCTTTCAACCTAAACGGTTTCAACT 93964 Query 20361 TTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCA 20420 ||||||| ||| | | || | | | || |||||||| | || ||||| |||||| ||| Sbjct 93965 TTAACCAATCCGTAGTTGATAGCCAGGGACGTGTCATAAACACATGGGCCGACATTATCA 94024 Query 20421 ATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAACTTCCCACTTG 20480 | || || || || || | ||||| ||||||||||| || ||||| |||||||| || | Sbjct 94025 ACCGCGCCAACCTTGGTATGGAGGTTATGCATGAACGTAACGCTCACAACTTCCCTCTAG 94084 Query 20481 ACCTTGC 20487 | || || Sbjct 94085 ATCTGGC 94091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148827460354764