Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20moellendorffii_20[refseq_20GCF_5F000143415.3_202010- 07-06] 758 sequences; 212,501,708 total letters Query= NC_026923.1 Length=179110 Score E Sequences producing significant alignments: (Bits) Value seq758 654 0.0 >seq758 Length=186484 Score = 654 bits (724), Expect = 0.0 Identities = 743/994 (75%), Gaps = 2/994 (0%) Strand=Plus/Plus Query 157675 CTTCTGCGAGTGGGTAACCTCAACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTACT 157734 ||||||||| ||| | ||| ||| | || || | || |||| |||||||||||||| Sbjct 93108 CTTCTGCGATTGGATCACCAGCACCGAAAATCGCCTTTACATTGGGTGGTTCGGTGTACT 93167 Query 157735 GATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTC 157793 |||||| || || || | ||||||| || || ||||| || || |||| |||| Sbjct 93168 GATGATCCCGACCCTGTTAACTGCAAC-CTCCGTATTCATTACTGCTTTTATCGCAGCTC 93226 Query 157794 CCCCTGTGGACATTGACGGCATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 157853 | || || || |||||||| || ||||| || ||| ||||||| || || || || |||| Sbjct 93227 CGCCAGTAGATATTGACGGTATTCGCGAGCCCGTTTCTGGTTCTCTTATATACGGGAACA 93286 Query 157854 ACATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTCCACTTCTACCCCA 157913 | || ||||||||||| || | || | || ||| |||||| | ||||||||||||| Sbjct 93287 ATATAATCTCTGGTGCTATTATCCCCACCTCCGCCGCTATCGGTTTGCACTTCTACCCCA 93346 Query 157914 TCTGGGAAGCAGCATCTCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTAG 157973 | |||||||| |||||| |||| || ||||| || ||||| ||||| | | |||| | | Sbjct 93347 TTTGGGAAGCGGCATCTATTGATGAATGGCTATACAACGGCGGTCCCTACGAACTAATCG 93406 Query 157974 TATTCCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTCTCTTACC 158033 | | ||||||||| | || | | ||| ||||| |||||||||||||| | || Sbjct 93407 TTCTTCACTTCCTGCTTGGAGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGCTTCC 93466 Query 158034 GTTTAGGTATGCGCCCATGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCGAGTG 158093 | || ||||||||||| |||||| ||| || || || || || || || || || | | Sbjct 93467 GCTTGGGTATGCGCCCTTGGATCGCTGTTGCGTACTCAGCCCCTGTTGCAGCCGCCACCG 93526 Query 158094 CAGTATTCCTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTA 158153 | || || | |||| ||| | |||||||| |||||||| | ||||||| | || | Sbjct 93527 CCGTTTTTTTGATCTACCCTATTGGTCAAGGAAGCTTCTCCGACGGTATGCCTTTAGGAA 93586 Query 158154 TCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACC 158213 ||||||| || || |||| ||| | || |||||||| |||||||||||||||||||| | Sbjct 93587 TCTCTGGCACCTTCAACTTTATGATCGTGTTCCAAGCTGAACACAACATCCTTATGCATC 93646 Query 158214 CGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATG 158273 ||||||| ||| | ||||| ||||| |||||||| |||||||| ||| ||||||||||| Sbjct 93647 CGTTCCACATGTTGGGTGTGGCTGGCGTATTCGGCGGATCTCTATTCAGTGCTATGCATG 93706 Query 158274 GAAGTCTCGTTACTTCCTCACTCGTTCGTGAAACGACTGAAACAGAGTCACAGAACTACG 158333 | | || ||||| || | || ||||| ||||| | || || ||| | Sbjct 93707 GTTCCTTGGTAACTTCTAGCCTGATCCGGGAAACCACTGAGAATGAATCCGCTAACGCGG 93766 Query 158334 GTTATAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCAGCCCATGGCTACTTCG 158393 |||| | ||| ||||| ||||| || || || ||||| || || || || || ||||||| Sbjct 93767 GTTACAGGTTTGGTCAGGAAGAGGAAACATATAACATTGTAGCTGCTCACGGTTACTTCG 93826 Query 158394 GTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTG 158453 |||| |||||||||||||| ||| || || |||||||||||| | ||||| ||| | | Sbjct 93827 GTCGATTGATCTTCCAATATGCTAGCTTTAATAACTCCCGTTCCCTACACTTTTTCTTGG 93886 Query 158454 CTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCA 158513 |||| ||||| || || || |||||||| ||||| | ||| | || ||||| |||| Sbjct 93887 CTGCTTGGCCAGTAGTAGGTATCTGGTTTACCGCTTTGGGCATAAGCACAATGGCTTTCA 93946 Query 158514 ACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACA 158573 |||| |||||||||||||| ||||| ||| | ||||| | ||||| ||||| | |||| Sbjct 93947 ACCTAAACGGTTTCAACTTTAACCAATCCGTAGTTGATAGCCAGGGACGTGTCATAAACA 94006 Query 158574 CCTGGGCAGATGTACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACG 158633 | ||||| || | | |||||||| ||||||||||| ||||||||||| ||||||| Sbjct 94007 CATGGGCCGACATTATCAACCGCGCCAACCTTGGTATGGAGGTTATGCATGAACGTAACG 94066 Query 158634 CACACAACTTCCCACTGGATCTTGCTGCTGCTGA 158667 | ||||||||||| || ||||| ||| | | ||| Sbjct 94067 CTCACAACTTCCCTCTAGATCTGGCTTCCGTTGA 94100 Score = 383 bits (424), Expect = 2e-101 Identities = 699/1020 (69%), Gaps = 4/1020 (0%) Strand=Plus/Plus Query 159379 TTTGATGTCCTGGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGGTCTGGA 159438 |||||| | ||||||| ||| | |||| || |||| || |||||| ||||||| Sbjct 33896 TTTGATAACACGGATGACCGGCCAAGGAGAGACCGTTTTGCATTCGTGGGTCGGTCTGGT 33955 Query 159439 CTCCTACTTCTTCCCACTGCTTATATGGCCATTGGCGGTTGGCTTACTGGCACGACTTTT 159498 || |||||||| ||| ||| | | ||||||||| | || || || |||| | Sbjct 33956 CTATCGCTTCTTCCTCGTGCCTATTTCTCTCCCGGCGGTTGGTTCACGGGTACAACTTCT 34015 Query 159499 ATCACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTACCTTGAAGGTGCTAATTTTCTC 159558 |||| ||||||| ||||| | ||||||||||| | || ||| || | ||| Sbjct 34016 GTCACCTCACGGTACACTCACGGATTGGCTAGTTCCTATCCGGAGGGTCGCAACTCTCTT 34075 Query 159559 ACGGCAGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGT 159618 || | |||| || || || || | | ||||| | | | ||||||||| Sbjct 34076 ACCGTCGCTGCATCCACCCCCGCCAACAGCCCAGCACATTCCCCGCCGTTGCTTTGGGGT 34135 Query 159619 CCTGAGTCTCAAGGCGACTTCCAACGCTGGTGCCAACTTGGAGGGATTTGGTCCTTTGTT 159678 || ||| | ||||| || ||| || ||||||||| | || || | ||| |||| || Sbjct 34136 CCCGAGGCGCAAGGAGATTTCACCCGTTGGTGCCAATTAGGTGGTCTATGGACCTTCGTC 34195 Query 159679 GCTCTCCACGGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATTTGAAATTGCTCG- 159737 || ||||| ||||| || | | | || ||| |||| | || |||| ||| | ||||| Sbjct 34196 GCCCTCCATGGTGCTTTTGGTTTGATGGGTCCTATGTTGCGCCAATCCGAACTCGCTCGA 34255 Query 159738 TCTAGTTGGTATC-CGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTG 159796 ||| || ||| ||||| || || || || ||||| || | ||| || || |||| || Sbjct 34256 TCTG--TGCAATCGCGTCCGTATAACGCAATCGCGTTTTCCGCTCCCATCGCCGTTTCTG 34313 Query 159797 TCAGCGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCG 159856 | ||||| | | ||| |||| |||| ||||| |||| | ||||| || | || Sbjct 34314 TTCCCGTATCCTTGATCCATCCGTTGGGCCAGTCCGGTCGGTTTTCCGCACCCAGCTCCG 34373 Query 159857 GGGTAGCAGCAATCTTTAGATTCCTGTTGTTCCTTCAGGGTTTCCACAACTGGACCCTCA 159916 | |||||||| ||||| ||| | | | ||| ||||||| |||| || |||||||||| Sbjct 34374 GTGTAGCAGCCATCTTCCGATCCATCCTCCTCCCTCAGGGTCTCCATAATTGGACCCTCA 34433 Query 159917 ACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTGTTGTGTGCAATCC 159976 |||| || |||||||||||||||||||| ||| |||| || | |||| | | Sbjct 34434 ACCCGTTTCATATGATGGGAGTTGCTGGAGTACCGGGTGCTGCTCCCCCACGTGCTACTC 34493 Query 159977 ATGGTGCTACTGTAGAGAACACATTGTTTGAAGATGGAGAACAAGCAAACACATTTAAGG 160036 | || || || || ||||| ||| |||| || ||||| || || || ||||| | Sbjct 34494 ACGGCGCAACCGTGGAGAATACACTGTTCGAGGATGGTGATGGCGCGAATACATTCCGCG 34553 Query 160037 CGTTTGAGCCTACTCAAGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGT 160096 | | | || || ||| |||||||||||||| ||||| ||||| || ||||| |||| Sbjct 34554 CCTCCAATCCGACCCAATCTGAAGAGACTTATTCCATGGTTACTGCTAATCGCTTTTGGT 34613 Query 160097 CGCAGATCTTCGGTGTTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTG 160156 | || | | ||||||||| | ||||| || || || || |||||| || | Sbjct 34614 CCCAAACATCCGGTGTTGCCCCCCCCAACAAACGTCGGTCACACTTCCCCATGTTATTCG 34673 Query 160157 TGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTTTCAACCTTC 160216 | || || | ||| | ||| ||||||| | ||||||| || || || | Sbjct 34674 TACCCGTCACTGGTTCACGGATGAGTGCTATTGGAGTAGTTGGTCTAGCCCCGAATCTGC 34733 Query 160217 GTGCTTACGATTTCGTGAGTCAGGAGATTAGAGCAGCAGAAGATCCTGAATTTGAGACCT 160276 | || || || ||||| |||||| | | |||||||||||||| || || || || Sbjct 34734 GGGCGTATGACTTCGTCTCCCAGGAGGTGCGCGCAGCAGAAGATCCCGAGTTCGAAACTC 34793 Query 160277 TCTACACCAAGAACATCCTATTGAATGAAGGACTTCGTGCTTGGATGGCACCTGCTGATC 160336 ||||| ||||| || || | |||||| || ||||||||||||||||| || |||| Sbjct 34794 CTTACACAAAGAATATTCTGTCGAATGAGGGTATTCGTGCTTGGATGGCAGCTCAGGATC 34853 Query 160337 AACCACATGAAAACTTTATCTTCCCTGAGGAAGTACTACCTAGAGGTAACGCACTGTGAT 160396 | || ||||||||| | | ||||| ||||| || ||||| | || ||||| || |||| Sbjct 34854 AGCCTCATGAAAACCTCGTATTCCCCGAGGAGGTTCTACCCCGTGGAAACGCTCTTTGAT 34913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 573018570597600