Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20moellendorffii_20[refseq_20GCF_5F000143415.3_202010- 07-06] 758 sequences; 212,501,708 total letters Query= NC_028663.1 Length=188632 Score E Sequences producing significant alignments: (Bits) Value seq758 511 6e-140 >seq758 Length=186484 Score = 511 bits (566), Expect = 6e-140 Identities = 707/986 (72%), Gaps = 4/986 (0%) Strand=Plus/Plus Query 176113 TTTTGCCAGTGGGTCACCAATACAAACAACAGAATTTACGTTGGTTGGTTTGGTGTGCTC 176172 || ||| | ||| |||||| || | || | ||||| |||| ||||| ||||| || Sbjct 93109 TTCTGCGATTGGATCACCAGCACCGAAAATCGCCTTTACATTGGGTGGTTCGGTGTACTG 93168 Query 176173 ATGATTCCATGTCTGCTCACTGCTGCAGCATGTTTTATCGTTGCATTTATTGCAGCACCA 176232 ||||| || ||| | ||||| | | || || ||| ||||| ||||| || Sbjct 93169 ATGATCCCGACCCTGTTAACTGCAACCTCCGTATTCATTACTGCTTTTATCGCAGCTCCG 93228 Query 176233 CCTGTCGATATCGACGGTATTCGCGAACCAGTAGCAGGATCTCTACTCTATGGAAACAAC 176292 || || ||||| |||||||||||||| || || | || ||||| | || || ||||| Sbjct 93229 CCAGTAGATATTGACGGTATTCGCGAGCCCGTTTCTGGTTCTCTTATATACGGGAACAAT 93288 Query 176293 ATCATCTCAGGAGCAGTCGTCCCAAGCTCAAACGCAATCGGACTACACTTCTACCCAATC 176352 || ||||| || || | |||| | ||| ||| ||||| | ||||||||||| || Sbjct 93289 ATAATCTCTGGTGCTATTATCCCCACCTCCGCCGCTATCGGTTTGCACTTCTACCCCATT 93348 Query 176353 TGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGAGGACCATACCAACTCGTTGTA 176412 |||||||| ||| | |||| |||||||| ||||| || || || ||| |||| | || Sbjct 93349 TGGGAAGCGGCATCTATTGATGAATGGCTATACAACGGCGGTCCCTACGAACTAATCGTT 93408 Query 176413 TTCCACTTCCTTATCGG--TATCTCAGCTTACATGGGACGCCAATGGGAACTTAGTTACA 176470 | |||||||| | || || || ||| ||||||| || | ||||||||||| | | Sbjct 93409 CTTCACTTCCTGCTTGGAGTAGCTT-GCT-ACATGGGTCGTGAGTGGGAACTTAGCTTCC 93466 Query 176471 GACTAGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCAGCGATGG 176530 | | || ||||| ||||||||| |||||| ||||| || || || | || || | | Sbjct 93467 GCTTGGGTATGCGCCCTTGGATCGCTGTTGCGTACTCAGCCCCTGTTGCAGCCGCCACCG 93526 Query 176531 CAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCTTTCTCTGATGGTATGCCTCTTGGCA 176590 | ||||| | |||| || | ||||||||| ||||| || ||||||||| | || | Sbjct 93527 CCGTTTTTTTGATCTACCCTATTGGTCAAGGAAGCTTCTCCGACGGTATGCCTTTAGGAA 93586 Query 176591 TTTCAGGTACATTCAACTTTATGTTTGTATTCCAAGCAGAGCACAACATTCTAATGCACC 176650 | || || || |||||||||||| | || |||||||| || |||||||| || ||||| | Sbjct 93587 TCTCTGGCACCTTCAACTTTATGATCGTGTTCCAAGCTGAACACAACATCCTTATGCATC 93646 Query 176651 CATTCCATATGCTTGGAGTAGCAGGTGTGTTTGGTGGATCTCTTTTCTCAGCAATGCACG 176710 | ||||| ||| | || || || || || || || |||||||| ||| || ||||| | Sbjct 93647 CGTTCCACATGTTGGGTGTGGCTGGCGTATTCGGCGGATCTCTATTCAGTGCTATGCATG 93706 Query 176711 GAAGTCTTGTTACTTCTTCACTTGTTAGAGAGACAACCGAAAACGAATCACAAAACTACG 176770 | | || |||||| || | | || || || || || ||||| ||| | Sbjct 93707 GTTCCTTGGTAACTTCTAGCCTGATCCGGGAAACCACTGAGAATGAATCCGCTAACGCGG 93766 Query 176771 GTTACAAATTCGGACAAGAAGAAGAGACATACAACATTGTAGCTGCACACGGTTACTTTG 176830 |||||| || || || ||||| || ||||| |||||||||||||| ||||||||||| | Sbjct 93767 GTTACAGGTTTGGTCAGGAAGAGGAAACATATAACATTGTAGCTGCTCACGGTTACTTCG 93826 Query 176831 GTCGTCTTATCTTCCAGTATGCTTCTTTCAATAACTCAAGAAGTCTTCACTTCTTCCTTG 176890 |||| | |||||||| |||||| || |||||||| | || ||||| ||| | | Sbjct 93827 GTCGATTGATCTTCCAATATGCTAGCTTTAATAACTCCCGTTCCCTACACTTTTTCTTGG 93886 Query 176891 CAGCATTCCCAGTTGTTTGCATCTGGTTTACTGCAATGGGTGTTTGCACAATGGCATTCA 176950 | || | ||||| || | ||||||||||| || |||| | |||||||||| |||| Sbjct 93887 CTGCTTGGCCAGTAGTAGGTATCTGGTTTACCGCTTTGGGCATAAGCACAATGGCTTTCA 93946 Query 176951 ACCTTAACGGTTTCAACTTCAACCAGTCTGTCTTAGACAACTCTGGTAAAGTGATTCCTA 177010 |||| |||||||||||||| ||||| || || | || | | || || || | Sbjct 93947 ACCTAAACGGTTTCAACTTTAACCAATCCGTAGTTGATAGCCAGGGACGTGTCATAAACA 94006 Query 177011 CATGGGGAGATATCCTTAACCGTGCAAACCTTGGTATGGAAGTTATGCACGAGCGTAATG 177070 |||||| || || | ||||| || |||||||||||||| |||||||| || ||||| | Sbjct 94007 CATGGGCCGACATTATCAACCGCGCCAACCTTGGTATGGAGGTTATGCATGAACGTAACG 94066 Query 177071 CTCACAACTTCCCACTTGACCTTGCT 177096 ||||||||||||| || || || ||| Sbjct 94067 CTCACAACTTCCCTCTAGATCTGGCT 94092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603488681890560