Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20moellendorffii_20[refseq_20GCF_5F000143415.3_202010- 07-06] 758 sequences; 212,501,708 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq2 104 2e-17 seq24 96.9 3e-15 seq6 96.9 3e-15 seq59 95.1 1e-14 seq32 95.1 1e-14 seq44 87.8 2e-12 seq317 86.0 5e-12 seq147 86.0 5e-12 seq125 84.2 2e-11 >seq2 Length=6181961 Score = 104 bits (114), Expect = 2e-17 Identities = 169/234 (72%), Gaps = 12/234 (5%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 ||||| | || || | |||||| || ||||| || || || || || || ||||| Sbjct 4455140 CCTCCACGTAGACGGAGCACCAAGTGGAGCGTCGATTCCTTCTGGATGTTGTAGTCGGCG 4455081 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGT-CGGTGGG 39176 || |||||| | || || ||||| || |||||||| || ||||||||||||| ||||||| Sbjct 4455080 AGAGTTCGTCCATCCTCGAGCTGCTTCCCCGCAAAGATGAGACGCTGCTGGTCCGGTGGG 4455021 Query 39177 CACGCTCTCTTTGTCCATGATTTTCTGT-TTGAGCGTCG-CCACCGTATC---GCTCGAC 39231 | | ||| |||||| ||| || ||| |||| ||| | | | || || ||| | Sbjct 4455020 -ATCCCCTCCTTGTCCTGGATCTT-TGTCTTGA-CGTTGTCGATGGTGTCCGAGCT---C 4454967 Query 39232 TCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATC 39285 ||||| || | |||||| | || || ||||| || || || ||||| |||||| Sbjct 4454966 TCCACCTCAAGCGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCATC 4454913 Score = 100 bits (110), Expect = 2e-16 Identities = 168/234 (72%), Gaps = 12/234 (5%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 ||||| | || || | |||||| || ||||| || || || || || || ||||| Sbjct 4455368 CCTCCACGTAGACGGAGCACCAAGTGGAGCGTCGATTCCTTCTGGATGTTGTAGTCGGCG 4455309 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGT-CGGTGGG 39176 || |||||| | || || ||||| || |||||||| || ||||||||||||| ||||||| Sbjct 4455308 AGAGTTCGTCCATCCTCGAGCTGCTTCCCCGCAAAGATGAGACGCTGCTGGTCCGGTGGG 4455249 Query 39177 CACGCTCTCTTTGTCCATGATTTTCTGT-TTGAGCGTCG-CCACCGTATC---GCTCGAC 39231 | | ||| |||||| ||| || ||| |||| ||| | | | || || ||| | Sbjct 4455248 -ATCCCCTCCTTGTCCTGGATCTT-TGTCTTGA-CGTTGTCGATGGTGTCCGAGCT---C 4455195 Query 39232 TCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATC 39285 ||||| || | |||||| | || || ||||| || || || || || |||||| Sbjct 4455194 TCCACCTCAAGCGTGATGGTCTTGCCAGTCAGGGTCTTGACGAATATCTGCATC 4455141 Score = 82.4 bits (90), Expect = 7e-11 Identities = 154/217 (71%), Gaps = 12/217 (6%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || || || || || || || ||||| ||||| || || |||| || Sbjct 4454439 CACCAAGTGAAGAGTTGATTCCTTCTGGATGTTGTAATCCGCAAGGGTCCGACCGTCCTC 4454380 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGT-CGGTGGGCACGCTCTCTTTGTCCA 39193 ||||| || || ||||| || | ||||||||||| ||||||| | | ||| |||||| Sbjct 4454379 GAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGGTCCGGTGGG-ATCCCCTCCTTGTCCT 4454321 Query 39194 TGATTTTCTGT-TTGAGCGTCG-CCACCGTATC---GCTCGACTCCACGTCCACCGTGAT 39248 ||| || ||| |||| ||| | | | || || ||| |||||| || | ||||| Sbjct 4454320 GGATCTT-TGTCTTGA-CGTTGTCGATGGTGTCCGAGCT---CTCCACCTCGAGAGTGAT 4454266 Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATC 39285 | || || || ||||| || || ||||| |||||| Sbjct 4454265 TGTCTTCCCAGTGAGCGTCTTGACGAAGATCTGCATC 4454229 >seq24 Length=2034879 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||||||| |||||| || ||||| || || || ||||| || || || | || || Sbjct 498900 ACCAAATGGAGCGTGGATTCCTTTTGGATGTTGTAGTCGGCCAGAGTCCGGCCATCTTCC 498841 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| ||||| || | ||||||||||| | || | || || |||||| | Sbjct 498840 AGCTGCTTGCCGGCAAAGATCAATCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGG 498781 Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || ||| || | | ||| | | | || ||| |||||| || | |||||| | || Sbjct 498780 ATCTTC-GTCTTAACGTTGTCAATTGTGTCGGAGCTCTCCACCTCGAGCGTGATCGTCTT 498722 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||||| || || || ||||||||||| Sbjct 498721 CCCCGTCAAGGTCTTGACGAAGATTTGCAT 498692 Score = 95.1 bits (104), Expect = 1e-14 Identities = 170/245 (69%), Gaps = 4/245 (2%) Strand=Plus/Minus Query 39041 ACTAAAATTTATTCAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTT 39100 || ||||||| || ||||| | | ||| | |||||||| ||||| ||| || | Sbjct 499161 ACGAAAATTTG--CATACCTCCACGAAGGCGAAGGACCAAATGGAGCGTCGACTCCTTCT 499104 Query 39101 GTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGAC 39160 | || || || ||||| || || || | || || ||||| ||||||||||| || | || Sbjct 499103 GGATGTTGTAGTCGGCCAGAGTCCGGCCATCTTCTAGCTGCTTGCCCGCAAAGATCAAAC 499044 Query 39161 GCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACC 39219 |||||||||| | ||| | | || |||||| ||| || || | ||| | | | Sbjct 499043 GCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTT-GGTCTTCACGTTGTCAATT 498985 Query 39220 GTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATT 39279 || ||| |||||| || | |||||| | || ||||||| || || || |||||| Sbjct 498984 GTGTCGGAGCTCTCCACCTCGAGCGTGATCGTCTTCCCCGTCAAGGTCTTGACGAAGATT 498925 Query 39280 TGCAT 39284 ||||| Sbjct 498924 TGCAT 498920 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||||||| |||||| || ||||| || || || |||||||| || || | || || Sbjct 498672 ACCAAATGGAGCGTGGATTCCTTTTGGATGTTGTAGTCGGCAAGAGTCCGGCCATCTTCT 498613 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| ||||| || | ||||||||||| | || | || || |||||| | Sbjct 498612 AGCTGCTTGCCGGCAAAGATCAATCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGG 498553 Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || || || | | ||| | | | ||| ||| |||||| || | ||| || | || Sbjct 498552 ATCTT-GGTCTTAACGTTGTCGATCGTGTCGGAGCTCTCCACCTCGAGCGTAATCGTCTT 498494 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||| || || || || || |||||||| Sbjct 498493 CCCCGTTAGGGTCTTGACGAAAATTTGCAT 498464 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||||||| ||||| ||| || || || || ||||| ||||| || || | || || Sbjct 499584 ACCAAATGGAGCGTCGACTCCTTCTGGATGTTGTAATCAGCAAGAGTCCGGCCATCCTCG 499525 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| || || || || | ||||||||| | || | || ||| |||||| | Sbjct 499524 AGCTGCTTGCCAGCGAAGATGAGCCTCTGCTGGTCCGGTGGAATGCCCTCCTTGTCCTGG 499465 Query 39196 ATTTTCTGTTTGAGCGTCGCCAC-CGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || || || | | ||| | || ||| ||| |||||| |||| ||||| | || Sbjct 499464 ATCTTG-GTCTTAACGTTGTCAATCGTGTCGGAGCTCTCCACCTCCAAGGTGATCGTCTT 499406 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || || || || ||||||||||| Sbjct 499405 GCCAGTGAGAGTCTTCACGAAGATTTGCAT 499376 Score = 82.4 bits (90), Expect = 7e-11 Identities = 152/219 (69%), Gaps = 8/219 (4%) Strand=Plus/Minus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 || || |||| ||| ||||| ||| || || || || || || ||||| || || || Sbjct 499362 CGCAAAACCAGATGAAGCGTAGACTCCTTCTGGATGTTGTAGTCCGCAAGAGTGCGGCCG 499303 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || |||||||| ||||| || || || | ||||||||||| | ||| | || || ||| Sbjct 499302 TCCTCAAGCTGCTTGCCTGCGAAGATCAATCGCTGCTGGTCCGGGGGGATGCCTTCCTTG 499243 Query 39190 TCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATC---GCTCGACTCCACGTCCACCGT 39245 ||| ||| || || | ||| | | | ||| || ||| |||||| |||| || Sbjct 499242 TCCTGGATCTT-GGTCTTCACGTTGTCGATCGTGTCCGAGCT---CTCCACCTCCAAGGT 499187 Query 39246 GATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||| | || || || || || || || || |||||||| Sbjct 499186 GATCGTCTTCCCTGTGAGGGTCTTGACGAAAATTTGCAT 499148 >seq6 Length=4135178 Score = 96.9 bits (106), Expect = 3e-15 Identities = 157/217 (72%), Gaps = 12/217 (6%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || || ||| || || || || || || ||||| ||||| | || || Sbjct 622933 CACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCTGCAAGAGTTCGACCATCCTC 622874 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCA 39193 ||||| || |||||||| || |||||||||||||| |||||| | | ||| |||||| Sbjct 622873 GAGCTGCTTCCCCGCAAAGATGAGACGCTGCTGGTCAGGTGGG-ATTCCCTCCTTGTCCT 622815 Query 39194 TGATTTTCTGT-TTGAGCGTCG-CCACCGTATC---GCTCGACTCCACGTCCACCGTGAT 39248 ||| || ||| |||| ||| | | | || || ||| |||||| || | ||||| Sbjct 622814 GGATCTT-TGTCTTGA-CGTTGTCGATGGTGTCCGAGCT---CTCCACCTCGAGAGTGAT 622760 Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATC 39285 | || || ||||| || || || |||||||||||| Sbjct 622759 GGTCTTGCCTGTCAGGGTCTTCACGAAGATTTGCATC 622723 Score = 91.5 bits (100), Expect = 1e-13 Identities = 156/217 (72%), Gaps = 12/217 (6%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 ||||| || ||||| ||| || || || || || || || || || ||| | || || Sbjct 622705 CACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGTCCATCCTC 622646 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCA 39193 ||||| || |||||||| || |||||||||||||| |||||| | | ||| |||||| Sbjct 622645 GAGCTGCTTCCCCGCAAAGATGAGACGCTGCTGGTCAGGTGGG-ATTCCCTCCTTGTCCT 622587 Query 39194 TGATTTTCTGT-TTGAGCGTCG-CCACCGTATC---GCTCGACTCCACGTCCACCGTGAT 39248 ||| || ||| |||| ||| | | | || || ||| |||||| || | ||||| Sbjct 622586 GGATCTT-TGTCTTGA-CGTTGTCGATGGTGTCCGAGCT---CTCCACCTCGAGAGTGAT 622532 Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATC 39285 | || || ||||| || || || |||||||||||| Sbjct 622531 GGTCTTGCCTGTCAGGGTCTTCACGAAGATTTGCATC 622495 >seq59 Length=1263218 Score = 95.1 bits (104), Expect = 1e-14 Identities = 170/245 (69%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 39041 ACTAAAATTTATTCAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTT 39100 || ||||||| || ||||| | | ||| | |||||||| ||||| ||| || | Sbjct 502877 ACGAAAATTTG--CATACCTCCACGAAGGCGAAGGACCAAATGGAGCGTCGACTCCTTCT 502934 Query 39101 GTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGAC 39160 | || || || ||||| || || || | || || ||||| ||||||||||| || | || Sbjct 502935 GGATGTTGTAGTCGGCCAGAGTCCGGCCATCTTCTAGCTGCTTGCCCGCAAAGATCAAAC 502994 Query 39161 GCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACC 39219 |||||||||| | || | || || |||||| ||| || || | ||| | | | Sbjct 502995 GCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTT-GGTCTTCACGTTGTCAATT 503053 Query 39220 GTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATT 39279 || ||| |||||| || | |||||| | || ||||||| || || || |||||| Sbjct 503054 GTGTCGGAGCTCTCCACCTCGAGCGTGATCGTCTTCCCCGTCAAGGTCTTGACGAAGATT 503113 Query 39280 TGCAT 39284 ||||| Sbjct 503114 TGCAT 503118 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||||||| ||||| ||| || || || || ||||| ||||| || || | || || Sbjct 502454 ACCAAATGGAGCGTCGACTCCTTCTGGATGTTGTAATCAGCAAGAGTCCGGCCATCCTCG 502513 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| || || || || | ||||||||| | || | || ||| |||||| | Sbjct 502514 AGCTGCTTGCCAGCGAAGATGAGCCTCTGCTGGTCCGGTGGAATGCCCTCCTTGTCCTGG 502573 Query 39196 ATTTTCTGTTTGAGCGTCGCCAC-CGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || || || | | ||| | || ||| ||| ||| || |||| ||||| | || Sbjct 502574 ATCTTG-GTCTTAACGTTGTCAATCGTGTCGGAGCTCTCTACCTCCAAGGTGATCGTCTT 502632 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || || || || ||||||||||| Sbjct 502633 GCCAGTGAGAGTCTTCACGAAGATTTGCAT 502662 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||||||| |||||| || || || || || || ||||| || || || | || || Sbjct 503138 ACCAAATGGAGCGTGGATTCCTTCTGGATGTTGTAGTCGGCCAGAGTCCGGCCATCTTCT 503197 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||||||||| || | |||||||||||| | || | || || |||||| | Sbjct 503198 AGCTGCTTGCCCGCAAAGATCAAACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGG 503257 Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || || || | ||| | | | || ||| |||||| || | ||| || | || Sbjct 503258 ATCTT-GGTCTTCACGTTGTCAATTGTGTCGGAGCTCTCCACCTCGAGCGTAATCGTCTT 503316 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||| || || || || ||||||||||| Sbjct 503317 CCCCGTTAGGGTCTTGACGAAGATTTGCAT 503346 Score = 82.4 bits (90), Expect = 7e-11 Identities = 152/219 (69%), Gaps = 8/219 (4%) Strand=Plus/Plus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 || || |||| || ||||| ||| ||||| || || || || ||||| || || || Sbjct 502676 CGCAAAACCAGGTGAAGCGTAGACTCCTTTTGGATGTTGTAGTCCGCAAGAGTGCGGCCG 502735 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || |||||||| ||||| || || || | ||||||||||| | ||| | || || ||| Sbjct 502736 TCCTCAAGCTGCTTGCCTGCGAAGATCAATCGCTGCTGGTCCGGGGGGATGCCTTCCTTG 502795 Query 39190 TCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATC---GCTCGACTCCACGTCCACCGT 39245 ||| ||| || || | ||| | | | ||| || ||| |||||| |||| || Sbjct 502796 TCCTGGATCTT-GGTCTTCACGTTGTCGATCGTGTCCGAGCT---CTCCACCTCCAAGGT 502851 Query 39246 GATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||| | || || || || || || || || |||||||| Sbjct 502852 GATCGTCTTCCCTGTGAGGGTCTTGACGAAAATTTGCAT 502890 >seq32 Length=1846953 Score = 95.1 bits (104), Expect = 1e-14 Identities = 170/245 (69%), Gaps = 4/245 (2%) Strand=Plus/Minus Query 39041 ACTAAAATTTATTCAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTT 39100 || ||||||| || ||||| | | ||| | |||||||| ||||| ||| || | Sbjct 247748 ACGAAAATTTG--CATACCTCCACGAAGGCGAAGGACCAAATGGAGCGTCGACTCCTTCT 247691 Query 39101 GTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGAC 39160 | || || || ||||| || || || | || || ||||| ||||||||||| || | || Sbjct 247690 GGATGTTGTAGTCGGCCAGAGTCCGGCCATCTTCTAGCTGCTTGCCCGCAAAGATCAAAC 247631 Query 39161 GCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACC 39219 |||||||||| | ||| | | || |||||| ||| || || | ||| | | | Sbjct 247630 GCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTT-GGTCTTCACGTTGTCAATT 247572 Query 39220 GTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATT 39279 || ||| |||||| || | |||||| | || ||||||| || || || |||||| Sbjct 247571 GTGTCGGAGCTCTCCACCTCGAGCGTGATCGTCTTCCCCGTCAAGGTCTTGACGAAGATT 247512 Query 39280 TGCAT 39284 ||||| Sbjct 247511 TGCAT 247507 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||||||| |||||| || ||||| || || || ||||| || || || | || || Sbjct 247487 ACCAAATGGAGCGTGGATTCCTTTTGGATGTTGTAGTCGGCCAGAGTCCGGCCATCTTCT 247428 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| ||||| || | ||||||||||| | || | || || |||||| | Sbjct 247427 AGCTGCTTGCCGGCAAAGATCAATCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGG 247368 Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || || || | | ||| | | | ||| ||| |||||| || | ||| || | || Sbjct 247367 ATCTT-GGTCTTAACGTTGTCGATCGTGTCGGAGCTCTCCACCTCGAGCGTAATCGTCTT 247309 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||| || || || || || |||||||| Sbjct 247308 CCCCGTTAGGGTCTTGACGAAAATTTGCAT 247279 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||||||| ||||| ||| || || || || ||||| ||||| || || | || || Sbjct 248171 ACCAAATGGAGCGTCGACTCCTTCTGGATGTTGTAATCAGCAAGAGTCCGGCCATCCTCG 248112 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| || || || || | ||||||||| | || | || ||| |||||| | Sbjct 248111 AGCTGCTTGCCAGCGAAGATGAGCCTCTGCTGGTCCGGTGGAATGCCCTCCTTGTCCTGG 248052 Query 39196 ATTTTCTGTTTGAGCGTCGCCAC-CGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || || || | | ||| | || ||| ||| ||| || |||| ||||| | || Sbjct 248051 ATCTTG-GTCTTAACGTTGTCAATCGTGTCGGAGCTCTCTACCTCCAAGGTGATCGTCTT 247993 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || || || || ||||||||||| Sbjct 247992 GCCAGTGAGAGTCTTCACGAAGATTTGCAT 247963 Score = 82.4 bits (90), Expect = 7e-11 Identities = 152/219 (69%), Gaps = 8/219 (4%) Strand=Plus/Minus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 || || |||| || ||||| ||| ||||| || || || || ||||| || || || Sbjct 247949 CGCAAAACCAGGTGAAGCGTAGACTCCTTTTGGATGTTGTAGTCCGCAAGAGTGCGGCCG 247890 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || |||||||| ||||| || || || | ||||||||||| | ||| | || || ||| Sbjct 247889 TCCTCAAGCTGCTTGCCTGCGAAGATCAATCGCTGCTGGTCCGGGGGGATGCCTTCCTTG 247830 Query 39190 TCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATC---GCTCGACTCCACGTCCACCGT 39245 ||| ||| || || | ||| | | | ||| || ||| |||||| |||| || Sbjct 247829 TCCTGGATCTT-GGTCTTCACGTTGTCGATCGTGTCCGAGCT---CTCCACCTCCAAGGT 247774 Query 39246 GATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||| | || || || || || || || || |||||||| Sbjct 247773 GATCGTCTTCCCTGTGAGGGTCTTGACGAAAATTTGCAT 247735 >seq44 Length=1658729 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 |||||| || || |||||||| || || || || | || || ||||| || || ||||| Sbjct 1443428 CTCTTTCTGGATGTTATAATCTGCCAGAGTACGCCCATCCTCGAGCTGCTTCCCGGCAAA 1443487 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 ||| |||||||||||||| | || | || || |||||| ||| || |||| | Sbjct 1443488 TATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTTGGTCTTGACATT 1443547 Query 39213 CGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTT 39269 | | ||| || ||| |||||| |||| ||||| | || || |||| || || Sbjct 1443548 GTCGATCGTGTCCGAGCT---CTCCACCTCCAGAGTGATCGTCTTGCCTGTCAAGGTCTT 1443604 Query 39270 AACAAAGATTTGCAT 39284 ||| ||||| ||||| Sbjct 1443605 AACGAAGATCTGCAT 1443619 >seq317 Length=11171 Score = 86.0 bits (94), Expect = 5e-12 Identities = 139/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || |||||||| || || || || | || || ||||| || || ||||| Sbjct 10243 CTCCTTCTGGATGTTATAATCCGCCAGGGTACGCCCATCCTCGAGCTGCTTCCCGGCAAA 10184 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||| | ||| | | ||| |||||| ||| || |||| ||| Sbjct 10183 GATGAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTAGTCTTGA-CGT 10125 Query 39213 CG-CCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTT 39268 | | | |||||| ||| |||||| |||| ||||| | || || ||||| || | Sbjct 10124 TGTCAATCGTATCCGAGCT---CTCCACCTCCAGAGTGATGGTCTTGCCAGTCAGGGTCT 10068 Query 39269 TAACAAAGATTTGCAT 39284 | || || || ||||| Sbjct 10067 TGACGAAAATCTGCAT 10052 Score = 82.4 bits (90), Expect = 7e-11 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || || || || || || || || || || || | || |||||||| || || || || Sbjct 2231 TCCTTCTGGATGTTGTAGTCCGCCAGCGTACGCCCATCCTCAAGCTGCTTCCCGGCGAAG 2172 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213 || |||||||||||||| | ||| | | ||| |||||| ||| || |||| ||| Sbjct 2171 ATGAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTAGTCTTGA-CGTT 2113 Query 39214 G-CCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTT 39269 | | | |||||| ||| |||||| |||| ||||| | || || || || || || Sbjct 2112 GTCAATCGTATCCGAGCT---CTCCACCTCCAGAGTGATGGTCTTCCCTGTAAGTGTCTT 2056 Query 39270 AACAAAGATTTGCATC 39285 |||||||| |||||| Sbjct 2055 GACAAAGATCTGCATC 2040 >seq147 Length=303747 Score = 86.0 bits (94), Expect = 5e-12 Identities = 139/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || |||||||| || || || || | || || ||||| || || ||||| Sbjct 247659 CTCCTTCTGGATGTTATAATCCGCCAGGGTACGCCCATCCTCGAGCTGCTTCCCGGCAAA 247600 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||| | ||| | | ||| |||||| ||| || |||| ||| Sbjct 247599 GATGAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTAGTCTTGA-CGT 247541 Query 39213 CG-CCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTT 39268 | | | |||||| ||| |||||| |||| ||||| | || || ||||| || | Sbjct 247540 TGTCAATCGTATCCGAGCT---CTCCACCTCCAGAGTGATGGTCTTGCCAGTCAGGGTCT 247484 Query 39269 TAACAAAGATTTGCAT 39284 | || || || ||||| Sbjct 247483 TGACGAAAATCTGCAT 247468 >seq125 Length=444406 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/197 (71%), Gaps = 8/197 (4%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || || || || || || | || |||||||| || || || || Sbjct 271248 CTCCTTCTGGATGTTGTAGTCCGCCAGCGTACGCCCATCCTCAAGCTGCTTCCCAGCGAA 271189 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||| | ||| | | ||| |||||| ||| ||| || | ||| Sbjct 271188 GATGAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTC-GTCTTCACGT 271130 Query 39213 CG-CCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTT 39268 | | | || || ||| |||||| |||| ||||| | || || ||||| || | Sbjct 271129 TGTCGATGGTGTCCGAGCT---CTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCT 271073 Query 39269 TAACAAAGATTTGCATC 39285 | ||||||||||||||| Sbjct 271072 TCACAAAGATTTGCATC 271056 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/208 (70%), Gaps = 9/208 (4%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || || || || || || | || |||||||| || || || || Sbjct 271020 CTCCTTCTGGATGTTGTAGTCCGCCAGCGTACGCCCATCCTCAAGCTGCTTCCCAGCGAA 270961 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 ||||| ||||||||||| | ||| | | ||| |||||| ||| ||| || | | | | Sbjct 270960 GATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTC-GTCTTAACAT 270902 Query 39213 CG-CCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTT 39268 | | | || || ||| |||||| || | ||||| | || || ||||| |||| Sbjct 270901 TGTCGATGGTGTCCGAGCT---CTCCACCTCGAGAGTGATCGTCTTGCCAGTCAGGGTTT 270845 Query 39269 TAACAAAGATTTGCATCTTTAC-GCCGA 39295 | |||||||| |||||| || | ||||| Sbjct 270844 TCACAAAGATCTGCATCGTTGCTGCCGA 270817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429541631804054