Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Astrammina_20rara_20[genbank_20GCA_5F000211355.2_202011-04-27] 3,231 sequences; 1,450,095 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq766 86.0 1e-11 seq655 86.0 1e-11 >seq766 Length=2811 Score = 86.0 bits (94), Expect = 1e-11 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770 |||| ||||||||| ||||||||||| |||| |||||| |||||||||||||||| || Sbjct 2707 CCCGCCTAGCTCAGCCGGTAGAGCGCTGGACTCTTAATCCAGTGGTCGTGGGTTCGATCC 2766 Query 165771 CCACGATGGG 165780 ||||| |||| Sbjct 2767 CCACGGTGGG 2776 >seq655 Length=1156 Score = 86.0 bits (94), Expect = 1e-11 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770 |||| ||||||||| ||||||||||| |||| |||||| |||||||||||||||| || Sbjct 690 CCCGCCTAGCTCAGCCGGTAGAGCGCTGGACTCTTAATCCAGTGGTCGTGGGTTCGATCC 631 Query 165771 CCACGATGGG 165780 ||||| |||| Sbjct 630 CCACGGTGGG 621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057780209061530