Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Astrammina_20rara_20[genbank_20GCA_5F000211355.2_202011-04-27] 3,231 sequences; 1,450,095 total letters Query= NC_006953.1 Length=37966 Score E Sequences producing significant alignments: (Bits) Value seq44 80.6 6e-11 >seq44 Length=747 Score = 80.6 bits (88), Expect = 6e-11 Identities = 138/198 (70%), Gaps = 7/198 (4%) Strand=Plus/Plus Query 33692 TGAGATTGCTTTTTTACGCTTGTCGTCATCTCCTTTCAAAAACATTTGCAGTTTGACCAA 33751 |||||||||||| || | | ||| |||| || | || ||||||| || | || Sbjct 120 TGAGATTGCTTTCTTTC---TATCGCCATCACCAGTTGTGAATGTTTGCAGCTTCATAAA 176 Query 33752 TCCAACCAAATCAACGTTATCAACATAATGCG--ACATTGATTTTTTACCCAAGCGCAAA 33809 |||||||| || | ||| | |||| ||| ||| | ||| ||| || | || Sbjct 177 ACCAACCAAGTCGCAATCATCTATATAAGGCGCGACACT--TTTCTTATGTAACCTTAAC 234 Query 33810 GAGTAGCGCATGTATGGGTCTTGGTCTGGTAGTTCGATTGTTTCCGTGTCAGCGTGAGCA 33869 | ||| | |||| | |||||||| ||||| || ||||| || || ||||| ||| || Sbjct 235 GTGTATCTGGTGTAAGCATCTTGGTCGGGTAGCTCTATTGTCTCTGTATCAGCATGACCA 294 Query 33870 ATGAAAACGATGTGCATA 33887 || ||||||||||||||| Sbjct 295 ATAAAAACGATGTGCATA 312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121364943276016