Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Astrammina_20rara_20[genbank_20GCA_5F000211355.2_202011-04-27] 3,231 sequences; 1,450,095 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq766 89.7 1e-12 seq655 89.7 1e-12 >seq766 Length=2811 Score = 89.7 bits (98), Expect = 1e-12 Identities = 58/64 (91%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 142505 CCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCC 142564 |||| |||||||| |||||||||||| ||||||||||| ||||||||||||||||| || Sbjct 2707 CCCGCCTAGCTCAGCCGGTAGAGCGCTGGACTCTTAATCCAGTGGTCGTGGGTTCGATCC 2766 Query 142565 CCAC 142568 |||| Sbjct 2767 CCAC 2770 >seq655 Length=1156 Score = 89.7 bits (98), Expect = 1e-12 Identities = 58/64 (91%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 142505 CCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCC 142564 |||| |||||||| |||||||||||| ||||||||||| ||||||||||||||||| || Sbjct 690 CCCGCCTAGCTCAGCCGGTAGAGCGCTGGACTCTTAATCCAGTGGTCGTGGGTTCGATCC 631 Query 142565 CCAC 142568 |||| Sbjct 630 CCAC 627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027794250447271