Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Astrammina_20rara_20[genbank_20GCA_5F000211355.2_202011-04-27] 3,231 sequences; 1,450,095 total letters Query= NC_009232.2 Length=42572 Score E Sequences producing significant alignments: (Bits) Value seq2707 109 1e-19 >seq2707 Length=240 Score = 109 bits (120), Expect = 1e-19 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 16329 AAATTCCGTAACGCGGCTGGCCAAGTTGGCTTTCAGGTGCAGGATATGGTTGTCCAGTTG 16388 || || ||||| | | |||||||| ||| ||||| || |||||| | | || ||| | Sbjct 39 AACTTTCGTAATGTCGTTGGCCAAGCTGGTTTTCAAGTACAGGATTTAGCAGTGCAGCTT 98 Query 16389 CAATCCGGCACATCGGCGTTCGTCGCTATAGGGCAGCAGGGTTCACAGTTGGCCGGGGCA 16448 ||| || || || || ||||| || | || || |||||||||||||| || || || Sbjct 99 CAACAGGGTACTTCTGCATTCGTTGCATTTGGTCAACAGGGTTCACAGTTAGCTGGTGCC 158 Query 16449 TTTGGGCCTGGCGGTGCGGTACTCGGCGCGATAATTGCATTAGCTTCTGCCGTTGGCGGG 16508 ||||| ||||||||||| ||| |||| ||| | ||||| | | | |||| | || || Sbjct 159 TTTGGCCCTGGCGGTGCTGTAATCGGTGCGGTTATTGCGGTGGGTGCTGCATTGGGTGGT 218 Query 16509 GTTCT 16513 ||||| Sbjct 219 GTTCT 223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136103577760548