Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Astrammina_20rara_20[genbank_20GCA_5F000211355.2_202011-04-27] 3,231 sequences; 1,450,095 total letters Query= NC_015283.1 Length=176428 Score E Sequences producing significant alignments: (Bits) Value seq8 84.2 2e-11 >seq8 Length=294 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/214 (71%), Gaps = 9/214 (4%) Strand=Plus/Minus Query 45344 GTCCAGATGTGTGTAACTTcccccccTTATTATGGACTAAGGGATTATGGTGGAGAGTCA 45403 || ||||||||||| ||||| || || ||||||||||| ||||| || ||| | | | Sbjct 271 GTGCAGATGTGTGTGACTTCACCGCCCTATTATGGACTCAGGGACTA---CGGACA-TGA 216 Query 45404 T-CACAAATAGGACAAGAACAAACACCCGAAGAATATATTGAAGAAC-TTGTAAAAGTAT 45461 | || |||||| |||| |||| || | | |||| |||| ||||| | || ||||| | Sbjct 215 TGGGCAGCTAGGACTAGAAGAAACCCCTGCAAAATACATTG-AGAACATGGTTAAAGTGT 157 Query 45462 TCAGAGAAGTTAAGAATGTTTTAGCAGATGATGGCACTCTATGGTTAAACATAGGGGATA 45521 | || || || | ||| ||||||||||| | ||| | || || ||||||| Sbjct 156 TTAGTCTGGTACGTGATTTATTAACAGATGATGGCGTGTTGTGGCTCAATATCGGGGATA 97 Query 45522 GTTATTATAACTATAGACCTGGTAAAGGTCAATC 45555 |||||| | | ||| | | ||||| |||||| Sbjct 96 GTTATTCAAGCCATAAAGATTGTAAA--TCAATC 65 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564418803614880