Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Astrammina_20rara_20[genbank_20GCA_5F000211355.2_202011-04-27] 3,231 sequences; 1,450,095 total letters Query= NC_015289.1 Length=176184 Score E Sequences producing significant alignments: (Bits) Value seq8 104 3e-17 >seq8 Length=294 Score = 104 bits (114), Expect = 3e-17 Identities = 136/185 (74%), Gaps = 5/185 (3%) Strand=Plus/Minus Query 43517 GTTCAAATGTGTGTGACCTCTCCACCTTATTACGGTTTGCGCGATTATGGTGGACAAGAT 43576 || || ||||||||||| || || || ||||| || | | || || || ||| ||| Sbjct 271 GTGCAGATGTGTGTGACTTCACCGCCCTATTATGGACTCAGGGACTACGG---ACATGAT 215 Query 43577 AAACAAATAGGACTAGAACAAACACCAGAAAAATATATTGAAGAAC-TGGTAAATGTGTT 43635 || ||||||||||| |||| || | |||||| ||||| |||| |||| || ||||| Sbjct 214 GGGCAGCTAGGACTAGAAGAAACCCCTGCAAAATACATTGA-GAACATGGTTAAAGTGTT 156 Query 43636 TAGAAAAGTTCGTGATGTTTTATCTGATGATGGTACATTATGGGTGAATATTGGGGATAG 43695 ||| || |||||| | ||| | |||||||| || ||| | ||||| |||||||| Sbjct 155 TAGTCTGGTACGTGATTTATTAACAGATGATGGCGTGTTGTGGCTCAATATCGGGGATAG 96 Query 43696 TTATT 43700 ||||| Sbjct 95 TTATT 91 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563638035149440