Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Astrammina_20rara_20[genbank_20GCA_5F000211355.2_202011-04-27] 3,231 sequences; 1,450,095 total letters Query= NC_023007.1 Length=168876 Score E Sequences producing significant alignments: (Bits) Value seq16 87.8 2e-12 >seq16 Length=985 Score = 87.8 bits (96), Expect = 2e-12 Identities = 169/245 (69%), Gaps = 6/245 (2%) Strand=Plus/Minus Query 89525 GTAGGAACTTCCATTCCTGCGACTGAACACAGTGTAATGTGTGCATA--TGGAGATACAA 89582 || || |||||| | ||||| || ||||| || ||||| ||| |||| | ||| Sbjct 443 GTCGGCACTTCCGTACCTGCTACCGAACATTCGGTTATGTG--CATGGGTGGAAAGACAG 386 Query 89583 ATGAATTTGAGTTATTCAAACGATTAATCACACAAA-TCTATCCAAACGGATTCTTCTCT 89641 |||| | || ||||| ||| || ||| || ||| | ||||| | ||| | | || Sbjct 385 ATGAGATAGAAACATTCAGACGTTTGATC-CATAAAGTATATCCTACCGGTCCCGTATCC 327 Query 89642 GTAGTTTCTGATACATGGGATTTCTGGAAGGTTGTTGGAGAGTATCTGCCAAAATTAAAA 89701 | || ||| || |||||||||||| ||||| || |||| |||||||||| ||| Sbjct 326 ATTGTAAGTGACACTTGGGATTTCTGGCAGGTTATTACTGAGTTCATGCCAAAATTGAAA 267 Query 89702 GATAAAATTATGGAACGTGATGGTCGAGTAGTAATCCGTCCAGATAGTGGTGACCCTGTT 89761 ||| |||| || | ||||| || ||| || | ||||| || ||||| || || || Sbjct 266 GATGAAATAATAGCGCGTGACGGAACAGTGGTCCTGCGTCCTGACAGTGGCGATCCGGTA 207 Query 89762 GAAAT 89766 |||| Sbjct 206 AAAAT 202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540253379635360