Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chondrus_20crispus_20[genbank_20GCA_5F000350225.2_202013-05-22] 926 sequences; 104,980,420 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq387 100 2e-16 >seq387 Length=288413 Score = 100 bits (110), Expect = 2e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 13151 CATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGA 13210 |||||| ||||| ||||| |||||||| | ||| |||||||| || || || || Sbjct 56234 CATGCATGTTCACAATGCAACCCTTCATCCCGTGATATAAGCTCGTTGGAGAAGGTGAGC 56293 Query 13211 CCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaT 13270 || ||||| ||||| | || || |||||||| | || |||||| |||||||| || Sbjct 56294 CCAGGCATGAGCCCCCTCTTCTTCATCCAAAACACGGCGCAAAACGACCCCGAAAAGAAA 56353 Query 13271 ATTCCTTCAACTGCTGCAAACGCTATCAACCTTTC 13305 || || || || ||||||||||| | | |||||| Sbjct 56354 ATCCCCTCCACGGCTGCAAACGCCACGAGCCTTTC 56388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430977536094252