Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chondrus_20crispus_20[genbank_20GCA_5F000350225.2_202013-05-22] 926 sequences; 104,980,420 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq534 86.0 6e-12 >seq534 Length=232212 Score = 86.0 bits (94), Expect = 6e-12 Identities = 111/151 (74%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 5355 TAACCTCAAAGTCGCTGTT-TCCGAAGTTAAACAGCACCACCCCGACATTGCCTCGGTAG 5413 |||||| ||||| || || |||||| || |||||||| || ||||| | || | || Sbjct 210994 TAACCTTGAAGTC-CTCTTCTCCGAAATTGAACAGCACGACGCCGACCTCCCCCCTATAA 210936 Query 5414 TCTTCGTCGATAACGCCAGCGCCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGT 5473 ||| |||| | |||||||| ||||||||||| | || || || || ||||| || Sbjct 210935 TCTGCGTCCACGACGCCAGCCCCCACGTCGATGCCCTTCTTCACGGCGAGCCCGGACCGC 210876 Query 5474 GGTGCTATGCGTCCGTAGCAACCAGGTGGGA 5504 || || | ||| |||||||| |||| |||| Sbjct 210875 GGGGCGACGCGCCCGTAGCACCCAGCGGGGA 210845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447745217289120