Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chondrus_20crispus_20[genbank_20GCA_5F000350225.2_202013-05-22] 926 sequences; 104,980,420 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq135 86.0 5e-12 >seq135 Length=363025 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | || || || | || ||| | || |||||| | Sbjct 297943 ATGCAGATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTGGAGGTCGAGTCTTCG 297884 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | || || |||||| ||||| || || || || || ||||| Sbjct 297883 GACACCATCGAGAACGTTAAGACTAAGATTCAGGACAAGGAGGGTATCCCGCCTGATCAG 297824 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| || || | || ||||||||| ||||| |||| | | | | ||| || ||| Sbjct 297823 CAGAGGCTTATCTTCGCCGGCAAGCAGCTCGAGGATGGGCGTACGTTGAACGACTACAAC 297764 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200 || || || |||||||| | ||| | ||| Sbjct 297763 ATCCAGAAGGAATCTACCCTCCATCTGGTG 297734 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | || || || | || ||| | || |||||| | Sbjct 298399 ATGCAGATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCTTCG 298340 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | || || |||||| ||||| || || || || || || || Sbjct 298339 GACACCATCGAGAACGTTAAGACTAAGATTCAGGACAAGGAGGGTATCCCGCCTGACCAG 298280 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| || || | || ||||||||| ||||| |||| | | | | ||| || ||| Sbjct 298279 CAGAGGCTTATCTTCGCCGGCAAGCAGCTCGAGGATGGGCGTACGTTGAACGACTACAAC 298220 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200 || || || |||||||| | ||| | ||| Sbjct 298219 ATCCAGAAGGAATCTACCCTCCATCTGGTG 298190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429931147903530