Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chondrus_20crispus_20[genbank_20GCA_5F000350225.2_202013-05-22] 926 sequences; 104,980,420 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq271 86.0 5e-12 >seq271 Length=8214 Score = 86.0 bits (94), Expect = 5e-12 Identities = 77/93 (83%), Gaps = 3/93 (3%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGA-GTAAGATCTAAGGAAC 114390 |||||||| |||||||||||||||| |||||||||||| | | ||| |||||||| || Sbjct 7217 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGCACAAGTACGATCTAAGAAAT 7276 Query 114391 CAAAACTGATATATTGAGCCATTCGTGGTATCG 114423 ||||||| || ||||||||||| ||| ||| Sbjct 7277 ATTAACTGATCTAATGAGCCATTCGCGGTTTCG 7309 Score = 86.0 bits (94), Expect = 5e-12 Identities = 77/93 (83%), Gaps = 3/93 (3%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGA-GTAAGATCTAAGGAAC 115587 |||||||| |||||||||||||||| |||||||||||| | | ||| |||||||| || Sbjct 7217 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGCACAAGTACGATCTAAGAAAT 7276 Query 115588 CAAAACTGATATATTGAGCCATTCGTGGTATCG 115620 ||||||| || ||||||||||| ||| ||| Sbjct 7277 ATTAACTGATCTAATGAGCCATTCGCGGTTTCG 7309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397057918902652