Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chondrus_20crispus_20[genbank_20GCA_5F000350225.2_202013-05-22] 926 sequences; 104,980,420 total letters Query= NC_014564.2 Length=45413 Score E Sequences producing significant alignments: (Bits) Value seq534 89.7 1e-13 >seq534 Length=232212 Score = 89.7 bits (98), Expect = 1e-13 Identities = 167/239 (70%), Gaps = 10/239 (4%) Strand=Plus/Plus Query 1039 GTGCCTCCGCGTTCGG--GAGCCGTCATTTCGACGGGCCT-CTCGTTCGCTTTTCCGTCC 1095 ||||| ||||| ||| | |||||| | |||||| || | || ||| | ||| | Sbjct 210796 GTGCCGCCGCG--CGGCCGCGCCGTCGTCAAGACGGGGCTGCAGGTGCGCATCCCCG-CT 210852 Query 1096 GGCTACTACGGTCGGGTGGCCCCGCGCTCGGGTCTGGCCGCGAAATTTTTGATAGACGTG 1155 || | |||||| || || |||||||| || || || |||| ||| || |||||| Sbjct 210853 GGGTGCTACGGGCGCGTCGCCCCGCGGTCCGGGCTCGCCGTGAAGAAGGGCATCGACGTG 210912 Query 1156 GGGGCGGGCGTGGTGGATCCCGGTTACCGGGGGGAAGTGAAGGTGGTGCTGTTTAACCTG 1215 ||||| ||||| ||||| | | ||| ||||||| || || |||||||| || | Sbjct 210913 GGGGCTGGCGTCGTGGACGCAGATTATAGGGGGGAGGTCGGCGTCGTGCTGTTCAA--TT 210970 Query 1216 TCGGACCACA--ATTTCAACGTGCGGGAGGGGGACAGGATCGCGCAGCTGGTTTTGGAG 1272 ||||| | | | ||||| || | | ||||| ||| ||||||||||||| ||||| Sbjct 210971 TCGGAGAAGAGGACTTCAAGGTTAGCGTCGGGGATAGGGTCGCGCAGCTGGTGCTGGAG 211029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145198403344500