Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chondrus_20crispus_20[genbank_20GCA_5F000350225.2_202013-05-22] 926 sequences; 104,980,420 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq926 572 2e-158 seq137 572 2e-158 seq656 140 4e-28 >seq926 Length=180086 Score = 572 bits (634), Expect = 2e-158 Identities = 704/957 (74%), Gaps = 10/957 (1%) Strand=Plus/Minus Query 169438 TATGTTGGTTGGTTTGGTGTTCTAATGATTCCATGCTTACTCACAGCAGCAGCATGT-TT 169496 ||| |||||||||||||||| |||||||| ||| |||| ||||| || | ||| || Sbjct 18118 TATATTGGTTGGTTTGGTGTACTAATGATACCAACACTACTAACAGCTACATC-TGTATT 18060 Query 169497 CATCGTTGCATTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTAGC 169556 |||| |||||||| |||| |||||||| || || ||||| || ||| | |||||||| || Sbjct 18059 CATCATTGCATTCGTTGCTGCACCTCCAGTTGACATCGATGGTATCCGTGAACCAGTTGC 18000 Query 169557 GGGTTCTTTCTTGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCATCAAACGC 169616 |||||||| | |||||||| |||||||| |||||||| || | || || || Sbjct 17999 AGGTTCTTTACTTTATGGTAATAACATCATTTCTGGTGCTATTATACCTAGTTCTGCAGC 17940 Query 169617 TATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACTGTTGATGAATGGTTGTATAA 169676 || || | ||||| || || || |||||||| ||| || | ||||| ||| | ||||| Sbjct 17939 AATTGGTATTCACTTTTATCCTATTTGGGAAGCTGCATCTTTAGATGAGTGGCTATATAA 17880 Query 169677 TGGTGGTCCTTATCAGTTGGTAATCTTCCACTTCCTTATTGGTATCTCAGCATACATGGG 169736 |||||| || ||| | | | | | ||||| || | ||| | | || || || Sbjct 17879 TGGTGGCCCATATGAACTAATTGTTCTTCACTTTATTTTAGGTGTATGTTGCTATATTGG 17820 Query 169737 AAGACAGTGGGAACTATCATACAGATTAGGAATGCGTCCTTGGATCTGTGTTGCATACTC 169796 | | |||||| || ||| | ||||| ||||| |||||||||| ||||| | | Sbjct 17819 TCGTGAATGGGAATTAAGCTACCGTTTAGGTATGCGCCCTTGGATCTCAGTTGCTTTTAC 17760 Query 169797 TGCACCAGTATCTGCTGCATTCGCTGTATTCTTAGTATACCCATTTGGTCAGGGTTCATT 169856 || || ||| | || ||| || ||||| | || || ||| ||||||| || || Sbjct 17759 AGCTCCTGTAGCAGCAGCAGCAGCAGTATTTCTTGTTTATCCAATTGGTCAAGGAAGCTT 17700 Query 169857 CTCTGATGGTATGCCACTAGGTATCTCAGGTACTTTCAACTTTATGTTCGTTTTCCAAGC 169916 ||||||||||||||| |||| ||||| ||||| ||||| |||||| | ||||||||||| Sbjct 17699 CTCTGATGGTATGCCTTTAGGCATCTCTGGTACATTCAATTTTATGCTTGTTTTCCAAGC 17640 Query 169917 AGAGCATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATGTTCGGAGG 169976 |||||||||||||||||||||||||||||| ||| |||||||| | || || || Sbjct 17639 TGAGCATAACATTCTAATGCATCCTTTCCACCAATTAGGTGTAGCAGGTGTATTTGGGGG 17580 Query 169977 ATCTTTATTCTCAGCAATGCATGGTTCACTTGTTACTTCATCTCTAATCAGAGAAACAAC 170036 |||||||| || ||||||||||| ||||| ||||| | |||| | || ||||| Sbjct 17579 TTCTTTATTTAGTGCTATGCATGGTTCTCTTGTAACTTCTAGTTTAATTCGTGAGACAAC 17520 Query 170037 AGAGCAAGAGTCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAAACATACAACAT 170096 || | || ||| ||| ||||||| ||||| || |||||||||||||| || || || Sbjct 17519 TGAAAACGAATCAGCTAACAATGGTTACAAGTTTGGTCAAGAAGAAGAAACTTATAATAT 17460 Query 170097 AGTAGCAGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCATTCAACAACTC 170156 || ||||| || ||||||||||| ||| | || ||||| |||||| || |||||||| Sbjct 17459 TGTTGCAGCTCATGGTTACTTTGGACGTTTAATTTTCCAATATGCTAGTTTTAACAACTC 17400 Query 170157 AAGAAGTCTACACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTAT 170216 | ||||| |||||| ||| | | ||||||||| || | ||||| || | || Sbjct 17399 TCGTTCGCTACATTTCTTCTTAGGTATGTGGCCTGTTGTAGGTATTTGGTTTACAGCAAT 17340 Query 170217 GGGTATCTGCACAATGGCATTCAACTTGAATGGTTTCAACTTTAACCAATCAGTTGTTGA 170276 | | | | || ||||| ||||| || |||||||||||||| || |||||||||||||| Sbjct 17339 GTCTGTTAGTACTATGGCTTTCAATTTAAATGGTTTCAACTTCAATCAATCAGTTGTTGA 17280 Query 170277 T-GCTAA---CGGAAAAATCGTCCCAACATGGGGTGATGTTCTAAACAGAGCAAACTTGG 170332 | || || || || | | || |||| ||| || |||||||||| || || | Sbjct 17279 TAGCCAAGGCCGTGTAATTAAT----ACTTGGGCAGATATTTTAAACAGAGCTAATTTAG 17224 Query 170333 GTATGGAAGTTATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGCATCTG 170389 |||||||||| ||||||||| | |||||||| || || || ||||| |||| |||| Sbjct 17223 GTATGGAAGTAATGCATGAACGTAATGCACATAATTTTCCTCTAGATTTAGCGTCTG 17167 Score = 475 bits (526), Expect = 4e-129 Identities = 736/1047 (70%), Gaps = 27/1047 (3%) Strand=Plus/Plus Query 170523 GGTTGGTTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTTGTATTCATAGGATGG 170582 ||| |||||||| | |||| |||||| | || ||||| ||||||||||| | || ||| Sbjct 30386 GGTAGGTTTGATCTAATTGATGACTGGGTTAAAAGAGACCGTTTTGTATTTGTTGGTTGG 30445 Query 170583 TCTGGTCTTTTACTTCTGCCTTGTGCATACCTATCAATCGGTGGTTGGTTCTTAGGGACT 170642 ||||| | ||||| | || || |||||| || || | || || ||| | ||| ||| Sbjct 30446 TCTGGATTACTACTTTTTCCATGCGCATACTTAGCATTAGGAGGATGGCTAACAGGTACT 30505 Query 170643 ACCTTCGTTACATCATGGTATACACATGGTGTTGCTTCCTCATATCTTGAGGGATGTAAC 170702 || || ||||| ||||||||||||||||| | || ||||||| | || |||||||| Sbjct 30506 ACTTTTGTTACTTCATGGTATACACATGGATTAGCAAGCTCATATTTAGAAGGATGTAAT 30565 Query 170703 TTCCTAACAGCAGCAGTTTCCACACCTGGCGACGCAATGGGTCATAGTCTTCTGTTCCTT 170762 ||| ||||||| || || || ||||||| | ||||| ||| | | || || ||| Sbjct 30566 TTCTTAACAGCTGCCGTATCAACACCTGCGAATAGTATGGGACATTCTTTACTATTGCTT 30625 Query 170763 TGGGGACCTGAAGCACAAGGTTCATTTGTTCGTTGGTTACAACTCGGAGGTTTATGGAAC 170822 ||||| |||||||| ||||| || || |||| ||| | || || ||||| Sbjct 30626 TGGGGTCCTGAAGCTCAAGGAGATTTCACACGCTGGTGCCAAATAGGTGGACTATGGGCA 30685 Query 170823 TTTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCA-GACAATTTGAGAT 170881 ||| |||| |||||||| ||||| | || || || || | | |||||||||| || Sbjct 30686 TTTATAGCTCTACATGGATCTTTTGGCTTAATTGGCTT-TTGTTTACGACAATTTGAAAT 30744 Query 170882 CGCAGGACTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGT 170941 || |||||||||| |||||||| || |||||| | ||||| || | || ||||| Sbjct 30745 TGCTCGACTTGTAGGAATCAGACCCTATAACGCAATTGCATTTTCAGGACCAATTGCAGT 30804 Query 170942 CTTCACTAGC-ATCTTTCTGATCTATCCACTAGGTCAGCACAGTTGGTTCTTCGCACCAT 171000 || || | |||||||||| || ||| |||| || ||||||||||| || || Sbjct 30805 ATT-TGTATCTGTCTTTCTGATGTACCCATTAGGACAATCTAGTTGGTTCTTTGCTCCTA 30863 Query 171001 CATTCGGTGTCGCAGCAATTTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTA 171060 || || || || || || ||| | | | ||||| ||||||| ||||| ||| | Sbjct 30864 GTTTTGGAGTTGCTGCTATCTTTAGATTCCTTTTATTTCTACAAGGATTCCATAACTGGA 30923 Query 171061 CATTGAATCCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTATTATGTG 171120 || | ||||||||||| ||||||||||| || || || ||||| ||||| | || || | Sbjct 30924 CACTAAATCCATTTCATATGATGGGTGTAGCTGGTATCCTAGGAGGAGCTCTTTTGTGCG 30983 Query 171121 CCATTCATGGTGCAACAGTGCAGAACACATTGTATGAAGACACATCAGTTTATACTGATA 171180 | |||||||||||||| || || || ||||| | |||||| | | || ||| Sbjct 30984 CTATTCATGGTGCAACTGTACAAAATACATTATTTGAAGA------TGGTGATGCTGCCG 31037 Query 171181 ATAAAATTCAAAGCACAACATTCCGTGCCTTTGATCCTACACAGGAAGAAGAAACTTACA 171240 || || || | || ||| ||| || ||| ||||||||| ||| Sbjct 31038 AT---------------ACTTTTAGAGCATTTACTCCAACTCAGTCAGAAGAAACGTACT 31082 Query 171241 GTATGATTACAGCAAACAGATTCTGGTCACAGATATTTGGTATTGCTTTCTCTAACAAAA 171300 ||| | ||||| || | ||||||||||| || ||||| ||||||| ||||| ||| Sbjct 31083 CAATGGTAACAGCTAATCGTTTCTGGTCACAAATTTTTGGCGTTGCTTTTTCTAATAAAC 31142 Query 171301 GATTTTTACACTTCCTTATGTTGTTCGTTCCTGTCATGGGTATGTGGACATCATCTATAG 171360 | | ||||| || | ||| | ||||| ||||| | || | ||||| | | | Sbjct 31143 GCTGGTTACATTTTTTCATGCTTTTCGTACCTGTAACAGGATTATGGACTAGCGCATTTG 31202 Query 171361 GTATCGTAGGTCTAGCACTTAACCTCAGAGCATACGATTTTGTATCTCAAGAGATAAGAG 171420 |||| ||||| |||| | || | ||||| || ||||||||||| ||||| |||| | Sbjct 31203 GTATTGTAGGATTAGCTTTAAATTTGAGAGCTTATGATTTTGTATCACAAGAATTAAGGG 31262 Query 171421 CAGCAGAAGACCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTT-AATGAAGGT 171479 | || ||||| || || || || || || || || || ||||| ||| || || |||||| Sbjct 31263 CTGCTGAAGATCCTGAATTTGAAACATTTTATACAAAAAATAT-CTTATTAAACGAAGGT 31321 Query 171480 ATGAGAGCATGGATGTCATCAGTTGACCAACCACATGAGAACTTCGTATTCCCAGAAGAA 171539 || | ||||||||| || | |||||||| || || |||||| ||||||| || || Sbjct 31322 ATTCGTGCATGGATGGCAGCTCAAGACCAACCTCACGAAAACTTCATATTCCCGGAGGAG 31381 Query 171540 GTGTTACCAAGAGGTAACGCACTTTAA 171566 || || ||| | || ||||| |||||| Sbjct 31382 GTATTGCCACGTGGAAACGCCCTTTAA 31408 >seq137 Length=19730 Score = 572 bits (634), Expect = 2e-158 Identities = 704/957 (74%), Gaps = 10/957 (1%) Strand=Plus/Plus Query 169438 TATGTTGGTTGGTTTGGTGTTCTAATGATTCCATGCTTACTCACAGCAGCAGCATGT-TT 169496 ||| |||||||||||||||| |||||||| ||| |||| ||||| || | ||| || Sbjct 16804 TATATTGGTTGGTTTGGTGTACTAATGATACCAACACTACTAACAGCTACATC-TGTATT 16862 Query 169497 CATCGTTGCATTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTAGC 169556 |||| |||||||| |||| |||||||| || || ||||| || ||| | |||||||| || Sbjct 16863 CATCATTGCATTCGTTGCTGCACCTCCAGTTGACATCGATGGTATCCGTGAACCAGTTGC 16922 Query 169557 GGGTTCTTTCTTGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCATCAAACGC 169616 |||||||| | |||||||| |||||||| |||||||| || | || || || Sbjct 16923 AGGTTCTTTACTTTATGGTAATAACATCATTTCTGGTGCTATTATACCTAGTTCTGCAGC 16982 Query 169617 TATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACTGTTGATGAATGGTTGTATAA 169676 || || | ||||| || || || |||||||| ||| || | ||||| ||| | ||||| Sbjct 16983 AATTGGTATTCACTTTTATCCTATTTGGGAAGCTGCATCTTTAGATGAGTGGCTATATAA 17042 Query 169677 TGGTGGTCCTTATCAGTTGGTAATCTTCCACTTCCTTATTGGTATCTCAGCATACATGGG 169736 |||||| || ||| | | | | | ||||| || | ||| | | || || || Sbjct 17043 TGGTGGCCCATATGAACTAATTGTTCTTCACTTTATTTTAGGTGTATGTTGCTATATTGG 17102 Query 169737 AAGACAGTGGGAACTATCATACAGATTAGGAATGCGTCCTTGGATCTGTGTTGCATACTC 169796 | | |||||| || ||| | ||||| ||||| |||||||||| ||||| | | Sbjct 17103 TCGTGAATGGGAATTAAGCTACCGTTTAGGTATGCGCCCTTGGATCTCAGTTGCTTTTAC 17162 Query 169797 TGCACCAGTATCTGCTGCATTCGCTGTATTCTTAGTATACCCATTTGGTCAGGGTTCATT 169856 || || ||| | || ||| || ||||| | || || ||| ||||||| || || Sbjct 17163 AGCTCCTGTAGCAGCAGCAGCAGCAGTATTTCTTGTTTATCCAATTGGTCAAGGAAGCTT 17222 Query 169857 CTCTGATGGTATGCCACTAGGTATCTCAGGTACTTTCAACTTTATGTTCGTTTTCCAAGC 169916 ||||||||||||||| |||| ||||| ||||| ||||| |||||| | ||||||||||| Sbjct 17223 CTCTGATGGTATGCCTTTAGGCATCTCTGGTACATTCAATTTTATGCTTGTTTTCCAAGC 17282 Query 169917 AGAGCATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATGTTCGGAGG 169976 |||||||||||||||||||||||||||||| ||| |||||||| | || || || Sbjct 17283 TGAGCATAACATTCTAATGCATCCTTTCCACCAATTAGGTGTAGCAGGTGTATTTGGGGG 17342 Query 169977 ATCTTTATTCTCAGCAATGCATGGTTCACTTGTTACTTCATCTCTAATCAGAGAAACAAC 170036 |||||||| || ||||||||||| ||||| ||||| | |||| | || ||||| Sbjct 17343 TTCTTTATTTAGTGCTATGCATGGTTCTCTTGTAACTTCTAGTTTAATTCGTGAGACAAC 17402 Query 170037 AGAGCAAGAGTCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAAACATACAACAT 170096 || | || ||| ||| ||||||| ||||| || |||||||||||||| || || || Sbjct 17403 TGAAAACGAATCAGCTAACAATGGTTACAAGTTTGGTCAAGAAGAAGAAACTTATAATAT 17462 Query 170097 AGTAGCAGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCATTCAACAACTC 170156 || ||||| || ||||||||||| ||| | || ||||| |||||| || |||||||| Sbjct 17463 TGTTGCAGCTCATGGTTACTTTGGACGTTTAATTTTCCAATATGCTAGTTTTAACAACTC 17522 Query 170157 AAGAAGTCTACACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTAT 170216 | ||||| |||||| ||| | | ||||||||| || | ||||| || | || Sbjct 17523 TCGTTCGCTACATTTCTTCTTAGGTATGTGGCCTGTTGTAGGTATTTGGTTTACAGCAAT 17582 Query 170217 GGGTATCTGCACAATGGCATTCAACTTGAATGGTTTCAACTTTAACCAATCAGTTGTTGA 170276 | | | | || ||||| ||||| || |||||||||||||| || |||||||||||||| Sbjct 17583 GTCTGTTAGTACTATGGCTTTCAATTTAAATGGTTTCAACTTCAATCAATCAGTTGTTGA 17642 Query 170277 T-GCTAA---CGGAAAAATCGTCCCAACATGGGGTGATGTTCTAAACAGAGCAAACTTGG 170332 | || || || || | | || |||| ||| || |||||||||| || || | Sbjct 17643 TAGCCAAGGCCGTGTAATTAAT----ACTTGGGCAGATATTTTAAACAGAGCTAATTTAG 17698 Query 170333 GTATGGAAGTTATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGCATCTG 170389 |||||||||| ||||||||| | |||||||| || || || ||||| |||| |||| Sbjct 17699 GTATGGAAGTAATGCATGAACGTAATGCACATAATTTTCCTCTAGATTTAGCGTCTG 17755 Score = 475 bits (526), Expect = 4e-129 Identities = 736/1047 (70%), Gaps = 27/1047 (3%) Strand=Plus/Minus Query 170523 GGTTGGTTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTTGTATTCATAGGATGG 170582 ||| |||||||| | |||| |||||| | || ||||| ||||||||||| | || ||| Sbjct 4214 GGTAGGTTTGATCTAATTGATGACTGGGTTAAAAGAGACCGTTTTGTATTTGTTGGTTGG 4155 Query 170583 TCTGGTCTTTTACTTCTGCCTTGTGCATACCTATCAATCGGTGGTTGGTTCTTAGGGACT 170642 ||||| | ||||| | || || |||||| || || | || || ||| | ||| ||| Sbjct 4154 TCTGGATTACTACTTTTTCCATGCGCATACTTAGCATTAGGAGGATGGCTAACAGGTACT 4095 Query 170643 ACCTTCGTTACATCATGGTATACACATGGTGTTGCTTCCTCATATCTTGAGGGATGTAAC 170702 || || ||||| ||||||||||||||||| | || ||||||| | || |||||||| Sbjct 4094 ACTTTTGTTACTTCATGGTATACACATGGATTAGCAAGCTCATATTTAGAAGGATGTAAT 4035 Query 170703 TTCCTAACAGCAGCAGTTTCCACACCTGGCGACGCAATGGGTCATAGTCTTCTGTTCCTT 170762 ||| ||||||| || || || ||||||| | ||||| ||| | | || || ||| Sbjct 4034 TTCTTAACAGCTGCCGTATCAACACCTGCGAATAGTATGGGACATTCTTTACTATTGCTT 3975 Query 170763 TGGGGACCTGAAGCACAAGGTTCATTTGTTCGTTGGTTACAACTCGGAGGTTTATGGAAC 170822 ||||| |||||||| ||||| || || |||| ||| | || || ||||| Sbjct 3974 TGGGGTCCTGAAGCTCAAGGAGATTTCACACGCTGGTGCCAAATAGGTGGACTATGGGCA 3915 Query 170823 TTTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCA-GACAATTTGAGAT 170881 ||| |||| |||||||| ||||| | || || || || | | |||||||||| || Sbjct 3914 TTTATAGCTCTACATGGATCTTTTGGCTTAATTGGCTT-TTGTTTACGACAATTTGAAAT 3856 Query 170882 CGCAGGACTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGT 170941 || |||||||||| |||||||| || |||||| | ||||| || | || ||||| Sbjct 3855 TGCTCGACTTGTAGGAATCAGACCCTATAACGCAATTGCATTTTCAGGACCAATTGCAGT 3796 Query 170942 CTTCACTAGC-ATCTTTCTGATCTATCCACTAGGTCAGCACAGTTGGTTCTTCGCACCAT 171000 || || | |||||||||| || ||| |||| || ||||||||||| || || Sbjct 3795 ATT-TGTATCTGTCTTTCTGATGTACCCATTAGGACAATCTAGTTGGTTCTTTGCTCCTA 3737 Query 171001 CATTCGGTGTCGCAGCAATTTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTA 171060 || || || || || || ||| | | | ||||| ||||||| ||||| ||| | Sbjct 3736 GTTTTGGAGTTGCTGCTATCTTTAGATTCCTTTTATTTCTACAAGGATTCCATAACTGGA 3677 Query 171061 CATTGAATCCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTATTATGTG 171120 || | ||||||||||| ||||||||||| || || || ||||| ||||| | || || | Sbjct 3676 CACTAAATCCATTTCATATGATGGGTGTAGCTGGTATCCTAGGAGGAGCTCTTTTGTGCG 3617 Query 171121 CCATTCATGGTGCAACAGTGCAGAACACATTGTATGAAGACACATCAGTTTATACTGATA 171180 | |||||||||||||| || || || ||||| | |||||| | | || ||| Sbjct 3616 CTATTCATGGTGCAACTGTACAAAATACATTATTTGAAGA------TGGTGATGCTGCCG 3563 Query 171181 ATAAAATTCAAAGCACAACATTCCGTGCCTTTGATCCTACACAGGAAGAAGAAACTTACA 171240 || || || | || ||| ||| || ||| ||||||||| ||| Sbjct 3562 AT---------------ACTTTTAGAGCATTTACTCCAACTCAGTCAGAAGAAACGTACT 3518 Query 171241 GTATGATTACAGCAAACAGATTCTGGTCACAGATATTTGGTATTGCTTTCTCTAACAAAA 171300 ||| | ||||| || | ||||||||||| || ||||| ||||||| ||||| ||| Sbjct 3517 CAATGGTAACAGCTAATCGTTTCTGGTCACAAATTTTTGGCGTTGCTTTTTCTAATAAAC 3458 Query 171301 GATTTTTACACTTCCTTATGTTGTTCGTTCCTGTCATGGGTATGTGGACATCATCTATAG 171360 | | ||||| || | ||| | ||||| ||||| | || | ||||| | | | Sbjct 3457 GCTGGTTACATTTTTTCATGCTTTTCGTACCTGTAACAGGATTATGGACTAGCGCATTTG 3398 Query 171361 GTATCGTAGGTCTAGCACTTAACCTCAGAGCATACGATTTTGTATCTCAAGAGATAAGAG 171420 |||| ||||| |||| | || | ||||| || ||||||||||| ||||| |||| | Sbjct 3397 GTATTGTAGGATTAGCTTTAAATTTGAGAGCTTATGATTTTGTATCACAAGAATTAAGGG 3338 Query 171421 CAGCAGAAGACCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTT-AATGAAGGT 171479 | || ||||| || || || || || || || || || ||||| ||| || || |||||| Sbjct 3337 CTGCTGAAGATCCTGAATTTGAAACATTTTATACAAAAAATAT-CTTATTAAACGAAGGT 3279 Query 171480 ATGAGAGCATGGATGTCATCAGTTGACCAACCACATGAGAACTTCGTATTCCCAGAAGAA 171539 || | ||||||||| || | |||||||| || || |||||| ||||||| || || Sbjct 3278 ATTCGTGCATGGATGGCAGCTCAAGACCAACCTCACGAAAACTTCATATTCCCGGAGGAG 3219 Query 171540 GTGTTACCAAGAGGTAACGCACTTTAA 171566 || || ||| | || ||||| |||||| Sbjct 3218 GTATTGCCACGTGGAAACGCCCTTTAA 3192 >seq656 Length=557879 Score = 140 bits (154), Expect = 4e-28 Identities = 176/242 (73%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 154875 ATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAG 154934 ||||| || || ||||| || |||||||| || ||| | ||||| || | || | Sbjct 519014 ATGATCACGTATCCATCCACTCATGGTGTGTTCGAAGATGCCATTAAGGAGGTTTGCGAT 519073 Query 154935 ATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTA 154994 ||| |||||||||| || ||||| || || | ||||||||||| | || |||||||| Sbjct 519074 ATCATTCATGACAACGGCGGTCAAGTGTACATGGATGGAGCAAACATGAACGCACAGGTT 519133 Query 154995 GGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACA 155054 ||| | || | ||| |||||| |||||||| ||||| ||| | ||||| ||| Sbjct 519134 GGATTGTGCTCTCCTGGAGAGATTGGTGCCGATGTATGCCATCTGAACCTGCATAAGACA 519193 Query 155055 TTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGCAAAACAT 155114 ||||| || || ||||||||||| || || ||| | || || || ||||| || || || Sbjct 519194 TTCTGCATCCCTCATGGAGGTGGTGGACCAGGCATGGGACCCATTGGTGTTGCCAAGCAG 519253 Query 155115 CT 155116 || Sbjct 519254 CT 519255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579206095611840