Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chondrus_20crispus_20[genbank_20GCA_5F000350225.2_202013-05-22] 926 sequences; 104,980,420 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq926 574 6e-159 seq137 574 6e-159 seq656 127 2e-24 >seq926 Length=180086 Score = 574 bits (636), Expect = 6e-159 Identities = 721/988 (73%), Gaps = 10/988 (1%) Strand=Plus/Minus Query 171856 TATGTTGGTTGGTTCGGTGTACTCATGATCCCATGTTTGCTCACAGCAGCAGCATGCTTC 171915 ||| |||||||||| |||||||| ||||| ||| | || ||||| || | ||| Sbjct 18118 TATATTGGTTGGTTTGGTGTACTAATGATACCAACACTACTAACAGCTACATCTGTATTC 18059 Query 171916 ATCGTTGCATTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTTGCG 171975 ||| |||||||| |||| |||||||| || || ||||| || ||| | ||||||||||| Sbjct 18058 ATCATTGCATTCGTTGCTGCACCTCCAGTTGACATCGATGGTATCCGTGAACCAGTTGCA 17999 Query 171976 GGTTCTTTCTTATATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCA 172035 |||||||| | |||||||| |||||||| |||||||| || | || || ||| Sbjct 17998 GGTTCTTTACTTTATGGTAATAACATCATTTCTGGTGCTATTATACCTAGTTCTGCAGCA 17939 Query 172036 ATAGGTCTCCACTTCTACCCTATCTGGGAAGCAGCAACCGTAGATGAATGGTTGTACAAT 172095 || ||| | ||||| || ||||| |||||||| ||| | ||||||| ||| | || ||| Sbjct 17938 ATTGGTATTCACTTTTATCCTATTTGGGAAGCTGCATCTTTAGATGAGTGGCTATATAAT 17879 Query 172096 GGTGGTCCTTATCAGTTGGTAATCTTCCACTTCCTTATCGGTATCTCAGCATACATGGGA 172155 ||||| || ||| | | | | | ||||| || | ||| | | || || || Sbjct 17878 GGTGGCCCATATGAACTAATTGTTCTTCACTTTATTTTAGGTGTATGTTGCTATATTGGT 17819 Query 172156 AGACAGTGGGAACTATCATACAGATTAGGTATGAGACCATGGATATGTGTAGCATATTCA 172215 | | |||||| || ||| | ||||||||| | || ||||| | || || | | || Sbjct 17818 CGTGAATGGGAATTAAGCTACCGTTTAGGTATGCGCCCTTGGATCTCAGTTGCTTTTACA 17759 Query 172216 GCACCTGTATCAGCAGCATTTGCTGTGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTC 172275 || |||||| |||||||| || || || ||||| |||||| | ||||| || ||| Sbjct 17758 GCTCCTGTAGCAGCAGCAGCAGCAGTATTTCTTGTTTATCCAATTGGTCAAGGAAGCTTC 17699 Query 172276 TCTGATGGTATGCCACTAGGTATCTCAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCA 172335 |||||||||||||| |||| ||||| ||||| ||||| |||||| | || |||||||| Sbjct 17698 TCTGATGGTATGCCTTTAGGCATCTCTGGTACATTCAATTTTATGCTTGTTTTCCAAGCT 17639 Query 172336 GAGCATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATGTTTGGAGGA 172395 |||||||||||||||||||||||||||||| ||| |||||||| | ||||| || Sbjct 17638 GAGCATAACATTCTAATGCATCCTTTCCACCAATTAGGTGTAGCAGGTGTATTTGGGGGT 17579 Query 172396 TCTTTATTCTCAGCAATGCACGGTTCTTTAGTTACATCTTCTCTAATCAGAGAGACAACT 172455 |||||||| || ||||| |||||| | || || ||| | |||| | ||||||||| Sbjct 17578 TCTTTATTTAGTGCTATGCATGGTTCTCTTGTAACTTCTAGTTTAATTCGTGAGACAACT 17519 Query 172456 GAAGCAGAATCACAGAACTACGGATACAAGTTCGGACAAGAAGAAGAAACATACAACATA 172515 ||| |||||| ||| | || |||||||| || |||||||||||||| || || || Sbjct 17518 GAAAACGAATCAGCTAACAATGGTTACAAGTTTGGTCAAGAAGAAGAAACTTATAATATT 17459 Query 172516 GTAGCAGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCA 172575 || ||||| || ||||||||||| ||| | || ||||| |||||| ||| |||||||| Sbjct 17458 GTTGCAGCTCATGGTTACTTTGGACGTTTAATTTTCCAATATGCTAGTTTTAACAACTCT 17399 Query 172576 AGAAGTCTTCACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATG 172635 | || || |||||| ||| | | ||||||||| || | ||||| || | ||| Sbjct 17398 CGTTCGCTACATTTCTTCTTAGGTATGTGGCCTGTTGTAGGTATTTGGTTTACAGCAATG 17339 Query 172636 GGTATCTGTACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCAGTTGTAGAT 172695 | | |||| ||||| ||||| | || |||||||||||||| ||||||||||| ||| Sbjct 17338 TCTGTTAGTACTATGGCTTTCAATTTAAATGGTTTCAACTTCAATCAATCAGTTGTTGAT 17279 Query 172696 -GCTAACG----GTAAGATTGTTCCTACATGGGGTGACGTTCTTAACAGAGCAAACCTAG 172750 || || | |||| || ||| |||| || || | |||||||| || ||| Sbjct 17278 AGCCAAGGCCGTGTAA-----TTAATACTTGGGCAGATATTTTAAACAGAGCTAATTTAG 17224 Query 172751 GTATGGAAGTTATGCATGAAAGAAATGCACACAACTTCCCATTAGACCTTGCTTCTGCAG 172810 |||||||||| ||||||||| | |||||||| || || || |||| | || |||| Sbjct 17223 GTATGGAAGTAATGCATGAACGTAATGCACATAATTTTCCTCTAGATTTAGCGTCTGGTA 17164 Query 172811 AGTCTTCAACAGTTGCTTTAACAGCACC 172838 | || | | |||| ||| || ||||| Sbjct 17163 ACTCATTACCAGTAGCTCTAGTTGCACC 17136 Score = 464 bits (514), Expect = 7e-126 Identities = 737/1052 (70%), Gaps = 26/1052 (2%) Strand=Plus/Plus Query 172945 GGTTGGTTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGG 173004 ||| |||||||| | |||| |||||| | || ||||| ||||| ||||| | || ||| Sbjct 30386 GGTAGGTTTGATCTAATTGATGACTGGGTTAAAAGAGACCGTTTTGTATTTGTTGGTTGG 30445 Query 173005 TCTGGTCTTTTACTTCTACCTTGTGCTTACCTTTCTATCGGTGGTTGGTTCTTAGGAACT 173064 ||||| | ||||| | || || || ||| | | | || || ||| | ||| ||| Sbjct 30446 TCTGGATTACTACTTTTTCCATGCGCATACTTAGCATTAGGAGGATGGCTAACAGGTACT 30505 Query 173065 ACCTTCGTTACATCATGGTATACACATGGTATTGCATCTTCATATCTTGAAGGAGCAAAC 173124 || || ||||| ||||||||||||||||| | ||| |||||| | |||||| || Sbjct 30506 ACTTTTGTTACTTCATGGTATACACATGGATTAGCAAGCTCATATTTAGAAGGATGTAAT 30565 Query 173125 TTTTTAACAGCAGCAGTCTCCACACCTGGCGACGCAATGGGTCATAGTCTTCTGTTCCTT 173184 || |||||||| || || || ||||||| | ||||| ||| | | || || ||| Sbjct 30566 TTCTTAACAGCTGCCGTATCAACACCTGCGAATAGTATGGGACATTCTTTACTATTGCTT 30625 Query 173185 TGGGGACCTGAAGCACAAGGTTCATTCGTACGTTGGTTACAACTCGGAGGACTATGGAAC 173244 ||||| |||||||| ||||| ||| ||| |||| ||| | || ||||||||| Sbjct 30626 TGGGGTCCTGAAGCTCAAGGAGATTTCACACGCTGGTGCCAAATAGGTGGACTATGGGCA 30685 Query 173245 TTTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCCGTCAGTTTGAGATC 173304 ||| |||| |||||||| ||||| | || || || | || || ||||| || Sbjct 30686 TTTATAGCTCTACATGGATCTTTTGGCTTAATTGGCTTTTGTTTACGACAATTTGAAATT 30745 Query 173305 GCAGGACTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTC 173364 || |||||||||| |||||||| || |||||| | ||||| || | || ||||| Sbjct 30746 GCTCGACTTGTAGGAATCAGACCCTATAACGCAATTGCATTTTCAGGACCAATTGCAGTA 30805 Query 173365 TTCACTAGC-ATCTTTTTAATCTACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTC 173423 || || | ||||| | || |||||| |||| || ||||||||||| || ||| Sbjct 30806 TT-TGTATCTGTCTTTCTGATGTACCCATTAGGACAATCTAGTTGGTTCTTTGCTCCTAG 30864 Query 173424 ATTCGGTGTCGCAGCAATCTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTAC 173483 || || || || || |||||| | | | ||||| ||||||| ||||| ||| || Sbjct 30865 TTTTGGAGTTGCTGCTATCTTTAGATTCCTTTTATTTCTACAAGGATTCCATAACTGGAC 30924 Query 173484 ATTGAATCCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGC 173543 | | ||||||||||| ||||||||||| || || || ||||| ||||| | | || || Sbjct 30925 ACTAAATCCATTTCATATGATGGGTGTAGCTGGTATCCTAGGAGGAGCTCTTTTGTGCGC 30984 Query 173544 CATTCATGGTGCAACAGTGCAGAACACATTGTATGAAGACACATCACAATATACTGAAGG 173603 |||||||||||||| || || || ||||| | |||| || || Sbjct 30985 TATTCATGGTGCAACTGTACAAAATACATTATTTGAA------------------GATGG 31026 Query 173604 TAAGATTCAATCCACAACTTTCAGAGCATTTGATCCTACACAGGAAGAAGAAACTTATAG 173663 | ||| | || ||||| ||||||||| ||| || ||| ||||||||| || Sbjct 31027 T--GATGC-TGCCGATACTTTTAGAGCATTTACTCCAACTCAGTCAGAAGAAACGTACTC 31083 Query 173664 TATGATTACAGCGAACAGATTCTGGTCACAGATATTTGGTATCGCATTTTCAAACAAAAG 173723 ||| | ||||| || | ||||||||||| || ||||| | || ||||| || ||| | Sbjct 31084 AATGGTAACAGCTAATCGTTTCTGGTCACAAATTTTTGGCGTTGCTTTTTCTAATAAACG 31143 Query 173724 ATTTTTACACTTCCTCATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCCATAGG 173783 | ||||| || ||||| | ||||||||||| | || | ||||| | | || Sbjct 31144 CTGGTTACATTTTTTCATGCTTTTCGTACCTGTAACAGGATTATGGACTAGCGCATTTGG 31203 Query 173784 TATCGTAGGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGC 173843 ||| ||||| | || | || | ||||| || || |||||||| ||||| |||| || Sbjct 31204 TATTGTAGGATTAGCTTTAAATTTGAGAGCTTATGATTTTGTATCACAAGAATTAAGGGC 31263 Query 173844 AGCAGAAGATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTT-AATGAAGGTA 173902 || |||||||| || || || || || || || || ||||| ||| || || ||||||| Sbjct 31264 TGCTGAAGATCCTGAATTTGAAACATTTTATACAAAAAATAT-CTTATTAAACGAAGGTA 31322 Query 173903 TGAGAGCATGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGAAG 173962 | | ||||||||| || || ||| ||||| || || |||||| |||| || || || | Sbjct 31323 TTCGTGCATGGATGGCAGCTCAAGACCAACCTCACGAAAACTTCATATTCCCGGAGGAGG 31382 Query 173963 TGTTACCAAGAGGTAACGCACTTTAAATAATA 173994 | || ||| | || ||||| |||| ||||||| Sbjct 31383 TATTGCCACGTGGAAACGCCCTTT-AATAATA 31413 >seq137 Length=19730 Score = 574 bits (636), Expect = 6e-159 Identities = 721/988 (73%), Gaps = 10/988 (1%) Strand=Plus/Plus Query 171856 TATGTTGGTTGGTTCGGTGTACTCATGATCCCATGTTTGCTCACAGCAGCAGCATGCTTC 171915 ||| |||||||||| |||||||| ||||| ||| | || ||||| || | ||| Sbjct 16804 TATATTGGTTGGTTTGGTGTACTAATGATACCAACACTACTAACAGCTACATCTGTATTC 16863 Query 171916 ATCGTTGCATTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTTGCG 171975 ||| |||||||| |||| |||||||| || || ||||| || ||| | ||||||||||| Sbjct 16864 ATCATTGCATTCGTTGCTGCACCTCCAGTTGACATCGATGGTATCCGTGAACCAGTTGCA 16923 Query 171976 GGTTCTTTCTTATATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCA 172035 |||||||| | |||||||| |||||||| |||||||| || | || || ||| Sbjct 16924 GGTTCTTTACTTTATGGTAATAACATCATTTCTGGTGCTATTATACCTAGTTCTGCAGCA 16983 Query 172036 ATAGGTCTCCACTTCTACCCTATCTGGGAAGCAGCAACCGTAGATGAATGGTTGTACAAT 172095 || ||| | ||||| || ||||| |||||||| ||| | ||||||| ||| | || ||| Sbjct 16984 ATTGGTATTCACTTTTATCCTATTTGGGAAGCTGCATCTTTAGATGAGTGGCTATATAAT 17043 Query 172096 GGTGGTCCTTATCAGTTGGTAATCTTCCACTTCCTTATCGGTATCTCAGCATACATGGGA 172155 ||||| || ||| | | | | | ||||| || | ||| | | || || || Sbjct 17044 GGTGGCCCATATGAACTAATTGTTCTTCACTTTATTTTAGGTGTATGTTGCTATATTGGT 17103 Query 172156 AGACAGTGGGAACTATCATACAGATTAGGTATGAGACCATGGATATGTGTAGCATATTCA 172215 | | |||||| || ||| | ||||||||| | || ||||| | || || | | || Sbjct 17104 CGTGAATGGGAATTAAGCTACCGTTTAGGTATGCGCCCTTGGATCTCAGTTGCTTTTACA 17163 Query 172216 GCACCTGTATCAGCAGCATTTGCTGTGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTC 172275 || |||||| |||||||| || || || ||||| |||||| | ||||| || ||| Sbjct 17164 GCTCCTGTAGCAGCAGCAGCAGCAGTATTTCTTGTTTATCCAATTGGTCAAGGAAGCTTC 17223 Query 172276 TCTGATGGTATGCCACTAGGTATCTCAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCA 172335 |||||||||||||| |||| ||||| ||||| ||||| |||||| | || |||||||| Sbjct 17224 TCTGATGGTATGCCTTTAGGCATCTCTGGTACATTCAATTTTATGCTTGTTTTCCAAGCT 17283 Query 172336 GAGCATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATGTTTGGAGGA 172395 |||||||||||||||||||||||||||||| ||| |||||||| | ||||| || Sbjct 17284 GAGCATAACATTCTAATGCATCCTTTCCACCAATTAGGTGTAGCAGGTGTATTTGGGGGT 17343 Query 172396 TCTTTATTCTCAGCAATGCACGGTTCTTTAGTTACATCTTCTCTAATCAGAGAGACAACT 172455 |||||||| || ||||| |||||| | || || ||| | |||| | ||||||||| Sbjct 17344 TCTTTATTTAGTGCTATGCATGGTTCTCTTGTAACTTCTAGTTTAATTCGTGAGACAACT 17403 Query 172456 GAAGCAGAATCACAGAACTACGGATACAAGTTCGGACAAGAAGAAGAAACATACAACATA 172515 ||| |||||| ||| | || |||||||| || |||||||||||||| || || || Sbjct 17404 GAAAACGAATCAGCTAACAATGGTTACAAGTTTGGTCAAGAAGAAGAAACTTATAATATT 17463 Query 172516 GTAGCAGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCA 172575 || ||||| || ||||||||||| ||| | || ||||| |||||| ||| |||||||| Sbjct 17464 GTTGCAGCTCATGGTTACTTTGGACGTTTAATTTTCCAATATGCTAGTTTTAACAACTCT 17523 Query 172576 AGAAGTCTTCACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATG 172635 | || || |||||| ||| | | ||||||||| || | ||||| || | ||| Sbjct 17524 CGTTCGCTACATTTCTTCTTAGGTATGTGGCCTGTTGTAGGTATTTGGTTTACAGCAATG 17583 Query 172636 GGTATCTGTACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCAGTTGTAGAT 172695 | | |||| ||||| ||||| | || |||||||||||||| ||||||||||| ||| Sbjct 17584 TCTGTTAGTACTATGGCTTTCAATTTAAATGGTTTCAACTTCAATCAATCAGTTGTTGAT 17643 Query 172696 -GCTAACG----GTAAGATTGTTCCTACATGGGGTGACGTTCTTAACAGAGCAAACCTAG 172750 || || | |||| || ||| |||| || || | |||||||| || ||| Sbjct 17644 AGCCAAGGCCGTGTAA-----TTAATACTTGGGCAGATATTTTAAACAGAGCTAATTTAG 17698 Query 172751 GTATGGAAGTTATGCATGAAAGAAATGCACACAACTTCCCATTAGACCTTGCTTCTGCAG 172810 |||||||||| ||||||||| | |||||||| || || || |||| | || |||| Sbjct 17699 GTATGGAAGTAATGCATGAACGTAATGCACATAATTTTCCTCTAGATTTAGCGTCTGGTA 17758 Query 172811 AGTCTTCAACAGTTGCTTTAACAGCACC 172838 | || | | |||| ||| || ||||| Sbjct 17759 ACTCATTACCAGTAGCTCTAGTTGCACC 17786 Score = 464 bits (514), Expect = 7e-126 Identities = 737/1052 (70%), Gaps = 26/1052 (2%) Strand=Plus/Minus Query 172945 GGTTGGTTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGG 173004 ||| |||||||| | |||| |||||| | || ||||| ||||| ||||| | || ||| Sbjct 4214 GGTAGGTTTGATCTAATTGATGACTGGGTTAAAAGAGACCGTTTTGTATTTGTTGGTTGG 4155 Query 173005 TCTGGTCTTTTACTTCTACCTTGTGCTTACCTTTCTATCGGTGGTTGGTTCTTAGGAACT 173064 ||||| | ||||| | || || || ||| | | | || || ||| | ||| ||| Sbjct 4154 TCTGGATTACTACTTTTTCCATGCGCATACTTAGCATTAGGAGGATGGCTAACAGGTACT 4095 Query 173065 ACCTTCGTTACATCATGGTATACACATGGTATTGCATCTTCATATCTTGAAGGAGCAAAC 173124 || || ||||| ||||||||||||||||| | ||| |||||| | |||||| || Sbjct 4094 ACTTTTGTTACTTCATGGTATACACATGGATTAGCAAGCTCATATTTAGAAGGATGTAAT 4035 Query 173125 TTTTTAACAGCAGCAGTCTCCACACCTGGCGACGCAATGGGTCATAGTCTTCTGTTCCTT 173184 || |||||||| || || || ||||||| | ||||| ||| | | || || ||| Sbjct 4034 TTCTTAACAGCTGCCGTATCAACACCTGCGAATAGTATGGGACATTCTTTACTATTGCTT 3975 Query 173185 TGGGGACCTGAAGCACAAGGTTCATTCGTACGTTGGTTACAACTCGGAGGACTATGGAAC 173244 ||||| |||||||| ||||| ||| ||| |||| ||| | || ||||||||| Sbjct 3974 TGGGGTCCTGAAGCTCAAGGAGATTTCACACGCTGGTGCCAAATAGGTGGACTATGGGCA 3915 Query 173245 TTTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCCGTCAGTTTGAGATC 173304 ||| |||| |||||||| ||||| | || || || | || || ||||| || Sbjct 3914 TTTATAGCTCTACATGGATCTTTTGGCTTAATTGGCTTTTGTTTACGACAATTTGAAATT 3855 Query 173305 GCAGGACTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTC 173364 || |||||||||| |||||||| || |||||| | ||||| || | || ||||| Sbjct 3854 GCTCGACTTGTAGGAATCAGACCCTATAACGCAATTGCATTTTCAGGACCAATTGCAGTA 3795 Query 173365 TTCACTAGC-ATCTTTTTAATCTACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTC 173423 || || | ||||| | || |||||| |||| || ||||||||||| || ||| Sbjct 3794 TT-TGTATCTGTCTTTCTGATGTACCCATTAGGACAATCTAGTTGGTTCTTTGCTCCTAG 3736 Query 173424 ATTCGGTGTCGCAGCAATCTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTAC 173483 || || || || || |||||| | | | ||||| ||||||| ||||| ||| || Sbjct 3735 TTTTGGAGTTGCTGCTATCTTTAGATTCCTTTTATTTCTACAAGGATTCCATAACTGGAC 3676 Query 173484 ATTGAATCCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGC 173543 | | ||||||||||| ||||||||||| || || || ||||| ||||| | | || || Sbjct 3675 ACTAAATCCATTTCATATGATGGGTGTAGCTGGTATCCTAGGAGGAGCTCTTTTGTGCGC 3616 Query 173544 CATTCATGGTGCAACAGTGCAGAACACATTGTATGAAGACACATCACAATATACTGAAGG 173603 |||||||||||||| || || || ||||| | |||| || || Sbjct 3615 TATTCATGGTGCAACTGTACAAAATACATTATTTGAA------------------GATGG 3574 Query 173604 TAAGATTCAATCCACAACTTTCAGAGCATTTGATCCTACACAGGAAGAAGAAACTTATAG 173663 | ||| | || ||||| ||||||||| ||| || ||| ||||||||| || Sbjct 3573 T--GATGC-TGCCGATACTTTTAGAGCATTTACTCCAACTCAGTCAGAAGAAACGTACTC 3517 Query 173664 TATGATTACAGCGAACAGATTCTGGTCACAGATATTTGGTATCGCATTTTCAAACAAAAG 173723 ||| | ||||| || | ||||||||||| || ||||| | || ||||| || ||| | Sbjct 3516 AATGGTAACAGCTAATCGTTTCTGGTCACAAATTTTTGGCGTTGCTTTTTCTAATAAACG 3457 Query 173724 ATTTTTACACTTCCTCATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCCATAGG 173783 | ||||| || ||||| | ||||||||||| | || | ||||| | | || Sbjct 3456 CTGGTTACATTTTTTCATGCTTTTCGTACCTGTAACAGGATTATGGACTAGCGCATTTGG 3397 Query 173784 TATCGTAGGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGC 173843 ||| ||||| | || | || | ||||| || || |||||||| ||||| |||| || Sbjct 3396 TATTGTAGGATTAGCTTTAAATTTGAGAGCTTATGATTTTGTATCACAAGAATTAAGGGC 3337 Query 173844 AGCAGAAGATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTT-AATGAAGGTA 173902 || |||||||| || || || || || || || || ||||| ||| || || ||||||| Sbjct 3336 TGCTGAAGATCCTGAATTTGAAACATTTTATACAAAAAATAT-CTTATTAAACGAAGGTA 3278 Query 173903 TGAGAGCATGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGAAG 173962 | | ||||||||| || || ||| ||||| || || |||||| |||| || || || | Sbjct 3277 TTCGTGCATGGATGGCAGCTCAAGACCAACCTCACGAAAACTTCATATTCCCGGAGGAGG 3218 Query 173963 TGTTACCAAGAGGTAACGCACTTTAAATAATA 173994 | || ||| | || ||||| |||| ||||||| Sbjct 3217 TATTGCCACGTGGAAACGCCCTTT-AATAATA 3187 >seq656 Length=557879 Score = 127 bits (140), Expect = 2e-24 Identities = 264/390 (68%), Gaps = 20/390 (5%) Strand=Plus/Plus Query 159412 GCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTA--GGTGTCA 159469 ||||| ||||| ||||| || || |||| |||| || |||||| | || ||| || Sbjct 518876 GCACACGGAACCAATCCAGCCTCGGCAGCGATGCTTGGCATGAAAATCGTGACGGTTTC- 518934 Query 159470 AGTGTGATGATGATGGCAACATAGACATCAAAGATCT---AGAGAAGA-----AAGCAAT 159521 || |||||| |||||| | || | ||| || ||||||| ||||| Sbjct 518935 -GTCTGATGAAATGGGCAACGTGAACGTTGCAGAACTGCGAGAGAAGGCGGAGAAGCA-- 518991 Query 159522 CATGAATACATTTGAACTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATT 159581 || | ||| | || |||| | ||||| || |||||||| || |||||||| || Sbjct 518992 CAAGGATA------ATCTTTCATCGCTGATGATCACGTATCCATCCACTCATGGTGTGTT 519045 Query 159582 TGAAACAAACATCAGACAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCT 159641 ||| ||| | || | || | || ||||||| || || ||||| || || | Sbjct 519046 CGAAGATGCCATTAAGGAGGTTTGCGATATCATTCATGACAACGGCGGTCAAGTGTACAT 519105 Query 159642 TGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGA 159701 ||||| ||||| | || |||||||| || | || | || |||||| || Sbjct 519106 GGATGGAGCAAACATGAACGCACAGGTTGGATTGTGCTCTCCTGGAGAGATTGGTGCCGA 519165 Query 159702 TGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGG 159761 |||||| ||||| ||| | |||||||||||||| || || ||||||||||| || || || Sbjct 519166 TGTATGCCATCTGAACCTGCATAAGACATTCTGCATCCCTCATGGAGGTGGTGGACCAGG 519225 Query 159762 CGTAGGTCCTATTGGTGTAGCAAAACATCT 159791 | | || || |||||||| || || || || Sbjct 519226 CATGGGACCCATTGGTGTTGCCAAGCAGCT 519255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588044393307360