Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chondrus_20crispus_20[genbank_20GCA_5F000350225.2_202013-05-22] 926 sequences; 104,980,420 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq135 98.7 8e-16 >seq135 Length=363025 Score = 98.7 bits (108), Expect = 8e-16 Identities = 155/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || || || ||||| || || || |||||||||| | || | | | || || Sbjct 298875 ACCAAGTGGAGAGTGGATTCCTTCTGAATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCG 298934 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || || || ||||||||||| || || ||||| || ||||| || || ||| Sbjct 298935 AGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGCGGGATTCCTTCCTTGTCCTGA 298994 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || || | || | ||||| || | || || || || |||| || ||| Sbjct 298995 ATCTTAGTCTTCACGTTCTCAATGGTGTCCGAAGACTCGACCTCCAGGGTGATGGTCTTG 299054 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 ||||| | || || || || ||||||||| | | |||||| Sbjct 299055 CCGGTGAGGGTCTTGACGAAAATCTGCATGCCTCCACGAAGA 299096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396273927750582