Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chondrus_20crispus_20[genbank_20GCA_5F000350225.2_202013-05-22] 926 sequences; 104,980,420 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq135 116 3e-21 >seq135 Length=363025 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||||||| || || ||| ||||| || ||||| ||||| ||| | ||| |||| || Sbjct 298647 ACCAAATGAAGAGTAGACTCCTTTTGGATGTTGTAGTCAGAGAGAGTGCGACCGTCCTCG 298706 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| || || || || || | ||| || || | || | |||||||||||| | Sbjct 298707 AGCTGCTTGCCAGCGAAGATAAGCCTCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGA 298766 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || ||| | | || || || ||||| ||||||| || || || ||| Sbjct 298767 ATCTTCGTCTTCACATTCTCAATAGTGTCCGAGGCCTCAACCTCCAGGGTGATAGTCTTT 298826 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| || || |||||||||||||| Sbjct 298827 CCAGTCAAGGTCTTGACAAAAATCTGCAT 298855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380933300881098