Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chondrus_20crispus_20[genbank_20GCA_5F000350225.2_202013-05-22] 926 sequences; 104,980,420 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq759 96.9 2e-15 >seq759 Length=98512 Score = 96.9 bits (106), Expect = 2e-15 Identities = 137/190 (72%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 25930 CTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTC 25989 || |||||| | ||||| ||||| | | || || | || | || ||| |||||| Sbjct 48135 CTTCATAAAGAGGTCTGGGATCCATAGGCCGTAGAAGAGGTCACGAGCCCTCTGTTCTTC 48076 Query 25990 TTTTCCGTGATTCTTTTTTAGATCTAAGAAA-TCAAAAATATCTGAGTGCCATGGTTCTA 26048 || || |||||||| ||||| |||||| || | ||||||| |||||| || || | Sbjct 48075 CTTGCCATGATTCTTGCGAAGATC-AAGAAAGTCGAGGATATCTGCGTGCCAAGGCTCCA 48017 Query 26049 AATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTT 26108 ||||||||||||| ||| || | || || |||||||| || || || || || || | Sbjct 48016 AATAGATAGCAAATGCACCCTTCCGCTTCCCGCCACCTTGGTCCACATACCTAGCTGTGT 47957 Query 26109 CATTGAAAAC 26118 ||||||| || Sbjct 47956 CATTGAAGAC 47947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253037144285450