Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chondrus_20crispus_20[genbank_20GCA_5F000350225.2_202013-05-22] 926 sequences; 104,980,420 total letters Query= NC_023568.1 Length=246964 Score E Sequences producing significant alignments: (Bits) Value seq570 95.1 2e-14 >seq570 Length=214139 Score = 95.1 bits (104), Expect = 2e-14 Identities = 160/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 221326 TTCGATTGCTATATACTATCTACCGCACCGTGGGATAATCCCGGTGCATGGCAAGATAAA 221385 || ||| |||||| || || |||||||||||||| ||||| | || ||| || ||| Sbjct 107111 TTTGATACCTATATTCTCTCGACCGCACCGTGGGAAAATCCAAGCGCGTGGAGTGACAAA 107052 Query 221386 CGATTGTGGGTTGAGCGTTACTTAGGTAAAGGCGCTTACAAACGACTGATCTTGTCACAC 221445 | ||||| |||| | ||||| | ||| ||||||| |||||| | || ||| Sbjct 107051 TTGCTCTGGGTGAAGCGACATATAGGTGATTCAGCTCACAAACGCCTGATCCTTTCTCAC 106992 Query 221446 AATAAGCAGTTAAACTTCGGTCATTATCTCATCGACGACCGCACTAAAAACGGTGCAGGT 221505 ||||||| || || || || | ||||||| | || |||||||| || | | Sbjct 106991 CATAAGCATTTGAATGAGGGCGCGTACTTGGTCGACGATAGAACGAAAAACGGAGCGGCT 106932 Query 221506 GAGTTTATGGGCGAACACATTCACTTTGGCACAGACGAATTCCCTGATTGGG 221557 |||| ||||| || |||||||||||||| ||| || || | ||||| Sbjct 106931 TCGTTTGGTGGCGAGCATATTCACTTTGGCACTGACCGGTTTCCCGGTTGGG 106880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 790147653935040