Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chondrus_20crispus_20[genbank_20GCA_5F000350225.2_202013-05-22] 926 sequences; 104,980,420 total letters Query= NC_025963.1 Length=139981 Score E Sequences producing significant alignments: (Bits) Value seq534 86.0 6e-12 >seq534 Length=232212 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/225 (69%), Gaps = 4/225 (2%) Strand=Plus/Minus Query 5350 AGCTGCGCCACGCGGTCGCCTCGCCGC--ACCACGAAGGTCTCTTGGCCGAAGTTGAAGA 5407 |||||||| || | || || | ||| ||| |||| ||||| ||||| ||||| | Sbjct 211019 AGCTGCGCGACCCTATCCCC--GACGCTAACCTTGAAGTCCTCTTCTCCGAAATTGAACA 210962 Query 5408 GCACCACTCCCAGGTTCCCTCGGAAGTCCGGGTCCACGACGCCCGCTCCCACATCCACGA 5467 |||| || || | | ||| | | || | |||||||||||| || ||||| || | | Sbjct 210961 GCACGACGCCGACCTCCCCCCTATAATCTGCGTCCACGACGCCAGCCCCCACGTCGATGC 210902 Query 5468 AGTTGTTTACCGCGAGACCGGACCTCGGCGCCACGCGACCGTAGCAGCCGTATGGCGGGT 5527 || || || ||||| ||||||| ||| || ||||| |||||||| || || | Sbjct 210901 CCTTCTTCACGGCGAGCCCGGACCGCGGGGCGACGCGCCCGTAGCACCCAGCGGGGATGC 210842 Query 5528 GGATCTGCAGATCGGTCAGCACTACCGCGCGCCCCATCGGCGGCA 5572 | | |||||| | ||| || || ||||| || |||||||| Sbjct 210841 GCACCTGCAGCCCCGTCTTGACGACGGCGCGGCCGCGCGGCGGCA 210797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447806016585360