Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chondrus_20crispus_20[genbank_20GCA_5F000350225.2_202013-05-22] 926 sequences; 104,980,420 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq210 95.1 1e-14 >seq210 Length=341256 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | ||||| || | || | || || || || || || |||||||| | Sbjct 96362 CCACCGCGAAGACGCAACACAAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCTGAC 96421 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| || || |||||||| || || ||| | ||||||||||| || || || || Sbjct 96422 AGAGTGCGATCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGA 96481 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||||| || |||||| | |||| | | | | || | ||| || || Sbjct 96482 ATGCCCTCTTTGTCCTGGATCTTAGTCTTCACATTCGCGATGTTATCAGAGGCCTCGACC 96541 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || ||||| || | || ||||| || || ||||||||||| ||||| Sbjct 96542 TCAAGAGTAATCGTCTTACCCGTGAGGGTCTTCACAAAGATCTGCAT 96588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424929604349712