Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chondrus_20crispus_20[genbank_20GCA_5F000350225.2_202013-05-22] 926 sequences; 104,980,420 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq898 84.2 7e-11 >seq898 Length=425369 Score = 84.2 bits (92), Expect = 7e-11 Identities = 122/171 (71%), Gaps = 1/171 (1%) Strand=Plus/Minus Query 443700 TTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTT 443759 |||| |||||||| || || ||||| | || || || | || || ||| ||| Sbjct 413502 TTCGCAGAGCGACTCGTGGCCTTTGCCGCCGTGGAGGGCATTTTCTTCTCGGGCTCTTTT 413443 Query 443760 AGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGA 443819 || |||| |||| | || |||||||| | |||| || || ||||| |||||| Sbjct 413442 TGCG-CCATTTTCTACCTCAAGAAGCGTGGCTTGATGCCGGGCCTCACCTTCTCTAACGA 413384 Query 443820 ACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTA 443870 ||| ||| ||| ||||| || |||||||||||| ||||||||| ||||| Sbjct 413383 ACTCATCTCTCGTGACGAAGGGTTGCATTGCGACCACGCCTGTCTGCTCTA 413333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588317155386070