Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chondrus_20crispus_20[genbank_20GCA_5F000350225.2_202013-05-22] 926 sequences; 104,980,420 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq406 266 1e-65 seq926 183 9e-41 seq89 183 9e-41 seq135 138 3e-27 seq270 114 4e-20 seq561 111 5e-19 seq640 107 6e-18 seq825 89.7 2e-12 >seq406 Length=280524 Score = 266 bits (294), Expect = 1e-65 Identities = 1008/1573 (64%), Gaps = 24/1573 (2%) Strand=Plus/Minus Query 349200 CTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTG 349259 |||| || ||||| || || || || || ||||| || | || ||||| || ||||| | Sbjct 119098 CTATCGGCATCGACTTGGGCACGACCTACTCTTGCGTCGGCGTCTGGCAGAACGATCGCG 119039 Query 349260 TAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCG 349319 | || || || || || || || |||||| | || || || || || || || || || | Sbjct 119038 TCGAGATCATCGCCAACGACCAGGGTAACCGCACCACTCCCTCCTATGTCGCCTTCACTG 118979 Query 349320 AAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATA 349379 | |||||||| | || || || | || || || || | || || || | || | Sbjct 118978 ACTCTGAGCGTCTTATCGGCGACGCCGCCAAGAACCAGGTCGCAATCAACCCGACCAACA 118919 Query 349380 CGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCTG 349439 | || || || || ||| | ||||| || | | ||||||||| || || || | Sbjct 118918 CCGTCTTCGACGCCAAGAGGCTTATCGGCCGCCGCTTTTCTGACTCTTCCGTCCAGTCGG 118859 Query 349440 ATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGG 349499 | | || ||||| | | | ||| | || |||||||| || || | || Sbjct 118858 ACATGAAGCATTTCTCGTATGAAGTTATCAACAAGGACGGTGACAAGCCGTTCGCCAGGG 118799 Query 349500 TTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAG 349559 | || || || ||| | || | || || |||||||| || | ||| |||| | Sbjct 118798 TCCTGTACAAGGGCGAAAAGAAGGAGTTCAGCCCTGAAGAAATCTCCGCCATGATTTTGG 118739 Query 349560 TTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAA-ACAGTAACTGATGCTGTTATT 349618 || |||||||| |||| || | || || || | | | || | || ||||| Sbjct 118738 GCAAGATGAAGGATGTTGCCGAGTCCTACTTGGGCAAGGAGATCAAGACA-GCCGTTATC 118680 Query 349619 ACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATT 349678 ||||| || ||||| || || || | ||| | || || || ||||| || | |||| Sbjct 118679 ACTGTCCCCGCCTACTTCAACGACTCGCAGAGGCTGGCTACCAAGGATGCCGGTACCATT 118620 Query 349679 GCGGGGTTAAATGT-TCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737 || || | || || ||| | || || ||||| ||||| || || || || || || || Sbjct 118619 GCCGGTCTCAACGTCTCTC-GTATTATCAATGAGCCCACCGCCGCCGCCATCGCCTACGG 118561 Query 349738 GCTTGATAAAATGAGTGA-----------CCAAGaaaaa-aaTATTCTTATTTTTGATTT 349785 | || | | || ||||| | | || |||| || || ||| | Sbjct 118560 TTTGGACCGCAAGGCTGGAGGCCAGACCGCCAAGGAGAGGAACGTTCTCATCTTCGATCT 118501 Query 349786 AGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAA 349845 |||||||| || || ||||| || || || || |||| || || || || || || || Sbjct 118500 TGGTGGTGGAACCTTCGATGTCTCCCTCCTCACTATTGAGGATGGTATCTTCGAGGTGAA 118441 Query 349846 AGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCA 349905 || ||||||||||| || ||||| ||||| |||||||| ||||| ||| | || || Sbjct 118440 GGCCACTGCTGGTGACACTCATCTCGGTGGTGAAGATTTCGATAACCGTATGGTCAACCA 118381 Query 349906 TTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAAT 349965 ||| | || || || ||| | | || | || ||| | ||||| | | | Sbjct 118380 CTTTATGAACGAGTTCAAGAGGAAGAACAAGAAGGACATTTCTGGCAATCCCCGTTCCCT 118321 Query 349966 GCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAAC 350025 ||||| || | ||| ||| || ||||| |||||| | || | | || || | Sbjct 118320 CCGTCGTCTTCGCACTCAGTGCGAGCGTGCGAAGCGTCAGCTGTCCGCCGCCACTCAGGC 118261 Query 350026 CTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGC 350085 | || || ||||| || ||| || || || |||| || || | || ||||| Sbjct 118260 TACCATCGAGATTGACTCGCTTTTCGAAGGTGTTGACTTCTACTCCTCACTCACGCGTGC 118201 Query 350086 TCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGT 350145 ||| ||||| | || ||||| ||||| | | || |||| || || || || || Sbjct 118200 CAAGTTCGAAGAGCTCTGCATGGACCTTTTCCGTGGTACCTTGGAGCCGGTTGAGAAGGT 118141 Query 350146 ATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTC 350205 | || |||| || |||| | | ||||||| | || | ||||||||||| Sbjct 118140 TCTCCGCGACTCAAAGATCCCCAAGGCTGATGTTGATGACATCGTCCTCGTTGGTGGTTC 118081 Query 350206 TACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAAC-CTT 350264 || ||||| || || || || | || ||| || || || ||||| |||| || Sbjct 118080 CACCCGTATCCCTAAGGTCCAGGGTCTCCTCATTGACTTCTTCAACGGCAAGGAACTCTG 118021 Query 350265 CTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTT 350324 | ||| | || || || |||||||||||||| |||||||| || || ||||| | || Sbjct 118020 CAAGAAC-ATCAACCCGGATGAAGCTGTTGCTTATGGTGCCGCCGTCCAGGCTGCCATCC 117962 Query 350325 TATCTGGAAATAAGAGTTCT---AAAATTGATGATCTATTACTACTAGATGTAACTCCAC 350381 | | || | | | |||| || | | | ||| | | || || ||||| || || | Sbjct 117961 TCGCCGG---TGATACTTCTGAGAAGACTCAGGATTTGCTCCTGCTTGATGTCACCCCGC 117905 Query 350382 TTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTA 350441 | || ||||| | || || |||||| || ||||| || || || ||||| | || Sbjct 117904 TCTCTCTTGGTATCGAGACCGCTGGTGGCGTTATGACCGTCCTCATCAAGAGAAACACTA 117845 Query 350442 CTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAA 350501 || | || || || ||| || | || ||||| | || || || ||||| | || Sbjct 117844 CTATCCCGACCAAGAAGCAGCAGATCTTCTCTACGTACGCTGACAACCAGCCTGGTGTGC 117785 Query 350502 CAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAAT 350561 ||||| || || || ||||| ||| ||||||| || || ||||| | ||||| | | Sbjct 117784 TCATTCAGGTCTTCGAGGGTGAGCGTACTCGCACGAAGGACAATAACATCCTTGGCAAGT 117725 Query 350562 TTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCG 350621 | || | ||| || ||| || | || || || |||||||| || | |||| Sbjct 117724 TCGAGCTTTCGGGAATCCCCCCAGCCCCGCGTGGTGTGCCCCAGATTGAGGTTACCTTCG 117665 Query 350622 ATATTGATTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAAATCAAGTGGTAAAAGTA 350681 |||| || | || |||||| | || ||| || | || || | ||||| | | Sbjct 117664 ATATCGACGCCAACGGTATTCTCAACGTTGGTGCTGAAGATAAGAGCACCGGTAAGAAGA 117605 Query 350682 GTAAGGTAGAAATTACTAATGATAAATCTAGACTTTCAAAAGAAGATATTGAGAAAATGA 350741 |||| | ||||||||||| || | | || |||| || || |||||||||||| Sbjct 117604 ATAAGATCACCATTACTAATGACAAGGGTCGTCTCACAAAGGAGGACATTGAGAAAATGG 117545 Query 350742 CACAAGATGCCGA 350754 || |||||||| Sbjct 117544 TTCAGGATGCCGA 117532 >seq926 Length=180086 Score = 183 bits (202), Expect = 9e-41 Identities = 269/374 (72%), Gaps = 10/374 (3%) Strand=Plus/Plus Query 349520 AAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAG-GAAATTGC 349578 ||| | |||| || |||||| | ||| || ||||| | ||||| | ||| ||| Sbjct 82875 AAAGATTTTTCTCCAGAAGAAGTATCAGCACAAGTTTT-GAGAAAATTAGTAGAAGATGC 82933 Query 349579 TGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAA 349638 | |||||||||| |||| |||||| | ||||| ||||| || || || |||||||| Sbjct 82934 TAGTACATATTTAGGACAAACTGTAACTCAAGCTGTAATTACAGTCCCTGCATATTTTAA 82993 Query 349639 TGATGCCCAGCGTTCTGCAACAAAAGATGCTGG-CAGCATTGCGGGGTTAAATGTTCTAA 349697 |||| | ||| | ||||||||||||||||| ||| ||||| || || |||| ||| Sbjct 82994 TGATTCTCAGAGACAAGCAACAAAAGATGCTGGTCAG-ATTGCTGGACTAGATGTCTTAA 83052 Query 349698 GAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACC 349757 |||| ||||||||||| || || || || | ||||||| | ||||||| | || Sbjct 83053 GAATAATTAATGAACCAACAGCAGCTTCATTGTCATATGGTTTAGATAAAAAAA---ACA 83109 Query 349758 AAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAA 349817 | | ||| |||| | ||||||||||||| || || || |||||||| || || || Sbjct 83110 ATG---AAACTATTTTGGTTTTTGATTTAGGAGGCGGCACATTTGATGTTTCTGTATTAG 83166 Query 349818 CACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAG 349877 | | | ||| || |||| || ||| | | || | |||||||| || | ||||||| Sbjct 83167 AAGTAGGAGACGGTGTTTTCGAGGTTTTATCTACATCAGGTGATACTCACTTAGGTGGAG 83226 Query 349878 AAGATTTTGATAAT 349891 | |||||||||||| Sbjct 83227 ATGATTTTGATAAT 83240 Score = 150 bits (166), Expect = 5e-31 Identities = 318/472 (67%), Gaps = 23/472 (5%) Strand=Plus/Plus Query 350177 ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTA 350236 || |||||| |||| |||||||||||||||||| | || || | ||| | |||| Sbjct 83538 ATAGATGAAATAGTCTTAGTTGGTGGTTCTACAAGAATACCTGCTATACAAGA---ACTA 83594 Query 350237 TCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAA----TTAATCCAGATGAAGCTGT 350292 | ||| ||| ||||| ||| ||||| | ||||||||||||| || Sbjct 83595 GTGAAAAAAATTATTGGTAAAGATCCTA----ATCAAAGTGTAAATCCAGATGAAGTAGT 83650 Query 350293 TGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATAAGAGTTCTAAAATTGA 350352 ||| ||| || |||||||| ||| | ||||| |||| | |||| ||| Sbjct 83651 TGCTATTGGAGCAGCTGTTCAAGCAGGTGTTTTAGCTGGTGA----AGTT---AAA---- 83699 Query 350353 TGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGT 350412 ||| || || | ||||||| ||||| | || | || ||||||||| |||| || Sbjct 83700 -GATATACTATTGTTAGATGTTACTCCTTTATCATTGGGGGTAGAAACTTTAGGTGGTGT 83758 Query 350413 AATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTC 350472 |||||| ||||| | |||||| ||||||||||| ||||| || || ||| || Sbjct 83759 AATGACAAAAATTATTGCACGAAATACAACTGTACCTACTAAAAAATCAGAAGTTTTCTC 83818 Query 350473 TACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCG 350532 || || |||||||||||| ||| |||||| | | |||| ||||| | Sbjct 83819 AACTGCTGTAGATAATCAGCCGAATGTAGAAATTCATATTCTACAAGGAGAACGAGAATT 83878 Query 350533 CACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTGAAATTCCACCAATGCCTAG 350592 || ||||||||||| | || ||| |||| || || ||| ||| || || Sbjct 83879 TACAAAAGATAATAAAAGCCTAGGAACTTTTAGACTGGATGGTATTATGCCAGCACCAAG 83938 Query 350593 AGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAAATGGTATTTTA 350644 ||| || ||||| || ||||| |||||||||| ||| | |||||||||||| Sbjct 83939 AGGTGTACCTCAAATAGAAGTAACTTTCGATATAGATGCTAATGGTATTTTA 83990 Score = 132 bits (146), Expect = 1e-25 Identities = 582/905 (64%), Gaps = 77/905 (9%) Strand=Plus/Minus Query 182924 TAAAATACCATTAGAGTCAACATCAAATGATACTTCAATCTGTGGAACACCTCGTGGCAT 182983 |||||||||||||| || | ||| || | |||||| || || || ||||||| ||| Sbjct 83990 TAAAATACCATTAGCATCTATATCGAAAGTTACTTCTATTTGAGGTACACCTCTTGGTGC 83931 Query 182984 TGGTGGAAT----TCCAGTTAAAGTAAATTCACCTAATTTATTATTATCTTTAGTTCTTG 183039 ||| ||| |||||| || || ||| ||| | ||||||||||| || | Sbjct 83930 TGGCATAATACCATCCAGTCTAA--AAGTTC--CTAGGCTTTTATTATCTTTTGTAAATT 83875 Query 183040 CTCTCTCGCCTTCATATACT-TGAATAGTAACTGCTGGCTGATTATCACTATAAGTAGAA 183098 ||| || |||| || | | ||||| || ||||||||||| | ||| || Sbjct 83874 CTCGTTCTCCTTG-TAGAATATGAATTTCTACATTCGGCTGATTATCTACAGCAGTTGAG 83816 Query 183099 AAAACTTGCTTTTTATTAATAGGAATAGTTGAATTTCGCGGAACAATTACAGTCATTACT 183158 ||||||| ||| ||| |||| | ||||| |||||| | || |||| |||||||| Sbjct 83815 AAAACTTCTGATTTTTTAGTAGGTACAGTTGTATTTCGTGCAATAATTTTTGTCATTACA 83756 Query 183159 TCTCTGGCAGTTTCTAATCCTAATGATAATGGTGCTACATCTAGTAATAATAAATCTGAT 183218 | | |||||||| || |||||||| || | ||||||| |||| || |||| Sbjct 83755 CCACCTAAAGTTTCTACCCCCAATGATAAAGGAGTAACATCTAACAATAGTATATCT--- 83699 Query 183219 GTTTTATCTGATTTAATATCACTTAAAATTGCAGCTTGAACAGCTGCACCATATGCAACA 183278 ||| || | || ||||| | |||||||||||||| ||| ||||| Sbjct 83698 ---TTAACTTC------ACCAGCTAAAACACCTGCTTGAACAGCTGCTCCAATAGCAACT 83648 Query 183279 GCTTCATCTGGGTTAA----TTGAACGAGATAATTCTTTGCCATTAAAAAATTCTGAAAG 183334 |||||||||| || | |||| || ||||| || || || || | | Sbjct 83647 ACTTCATCTGGATTTACACTTTGATTAGGA----TCTTTACC---AATAATTTTTTTCAC 83595 Query 183335 CATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATACTACTTCATCGATATT 183394 | || ||| || || ||||| || |||||||| ||||| |||| |||||| ||| | Sbjct 83594 TAGTTCTTGTATAGCAGGTATTCTTGTAGAACCACCAACTAAGACTATTTCATCTATACT 83535 Query 183395 ACTTTTACTAATTTGTGAATCTTTTAAAACTTTTTCAACAGG-----GTCCATAGTTTTT 183449 |||| || |||| |||||| ||| | || | ||||| | | | || Sbjct 83534 ACTTGATTCAAGCTGTGCATCTTTCAAAGCATTATTTACAGGTATTTGGCAACGGT---- 83479 Query 183450 CTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAG---ATGaaaaaaaG 183506 || ||||||| | ||| | ||| ||| |||| | |||| || | ||| Sbjct 83478 -CAATTAAATCTTTCGATAGATTTTCAAATTTTGCACGCGTTATAGTTTTTTCTAAATGC 83420 Query 183507 TCAATACCATTAT-AT---AAGGAA-------TCAATTTCAATCGATGTTTGTG-TAGAT 183554 | | ||| ||| || ||| || | ||||| |||| ||||||| || || Sbjct 83419 TTAGGACCTGTATCATTCGAAGTAATAAAAGGTAAATTTATATCG--GTTTGTGATAAAT 83362 Query 183555 GATGATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATG-------A 183607 | ||||| |||||||| ||| ||| | ||| || |||| | | Sbjct 83361 TA-GATAACTCCATTTTAGCTTTTTCTGCAGCTTCTGTTAATCTCTGTAAAGCCTGTCTA 83303 Query 183608 TCTTGGATTATCTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTG 183667 ||||| ||| | ||||| | || || || ||||||||||| ||| | | Sbjct 83302 TCTTGACTTAAAT-TAATACC---TTCATCTT---TTTTAAATTCATCAATTAGCCATAA 83250 Query 183668 AAGTAATCTT-GTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAA 183726 || | ||||| |||||||||| || |||||||| || ||||| || | |||| | || Sbjct 83249 AACT-ATCTTATTATCAAAATCATCTCCACCTAAGTGAGTATCACCTGATGTAGATAAAA 83191 Query 183727 CTTCAAATATTCCGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAAT 183786 | || || | |||||| | | | ||| | || ||||||||||| || || || |||| Sbjct 83190 CCTCGAAAACACCGTCTCCTACTTCTAATACAGAAACATCAAATGTGCCGCCTCCTAAAT 83131 Query 183787 CAAAA 183791 ||||| Sbjct 83130 CAAAA 83126 >seq89 Length=37195 Score = 183 bits (202), Expect = 9e-41 Identities = 269/374 (72%), Gaps = 10/374 (3%) Strand=Plus/Plus Query 349520 AAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAG-GAAATTGC 349578 ||| | |||| || |||||| | ||| || ||||| | ||||| | ||| ||| Sbjct 31687 AAAGATTTTTCTCCAGAAGAAGTATCAGCACAAGTTTT-GAGAAAATTAGTAGAAGATGC 31745 Query 349579 TGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAA 349638 | |||||||||| |||| |||||| | ||||| ||||| || || || |||||||| Sbjct 31746 TAGTACATATTTAGGACAAACTGTAACTCAAGCTGTAATTACAGTCCCTGCATATTTTAA 31805 Query 349639 TGATGCCCAGCGTTCTGCAACAAAAGATGCTGG-CAGCATTGCGGGGTTAAATGTTCTAA 349697 |||| | ||| | ||||||||||||||||| ||| ||||| || || |||| ||| Sbjct 31806 TGATTCTCAGAGACAAGCAACAAAAGATGCTGGTCAG-ATTGCTGGACTAGATGTCTTAA 31864 Query 349698 GAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACC 349757 |||| ||||||||||| || || || || | ||||||| | ||||||| | || Sbjct 31865 GAATAATTAATGAACCAACAGCAGCTTCATTGTCATATGGTTTAGATAAAAAAA---ACA 31921 Query 349758 AAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAA 349817 | | ||| |||| | ||||||||||||| || || || |||||||| || || || Sbjct 31922 ATG---AAACTATTTTGGTTTTTGATTTAGGAGGCGGCACATTTGATGTTTCTGTATTAG 31978 Query 349818 CACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAG 349877 | | | ||| || |||| || ||| | | || | |||||||| || | ||||||| Sbjct 31979 AAGTAGGAGACGGTGTTTTCGAGGTTTTATCTACATCAGGTGATACTCACTTAGGTGGAG 32038 Query 349878 AAGATTTTGATAAT 349891 | |||||||||||| Sbjct 32039 ATGATTTTGATAAT 32052 Score = 150 bits (166), Expect = 5e-31 Identities = 318/472 (67%), Gaps = 23/472 (5%) Strand=Plus/Plus Query 350177 ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTA 350236 || |||||| |||| |||||||||||||||||| | || || | ||| | |||| Sbjct 32350 ATAGATGAAATAGTCTTAGTTGGTGGTTCTACAAGAATACCTGCTATACAAGA---ACTA 32406 Query 350237 TCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAA----TTAATCCAGATGAAGCTGT 350292 | ||| ||| ||||| ||| ||||| | ||||||||||||| || Sbjct 32407 GTGAAAAAAATTATTGGTAAAGATCCTA----ATCAAAGTGTAAATCCAGATGAAGTAGT 32462 Query 350293 TGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATAAGAGTTCTAAAATTGA 350352 ||| ||| || |||||||| ||| | ||||| |||| | |||| ||| Sbjct 32463 TGCTATTGGAGCAGCTGTTCAAGCAGGTGTTTTAGCTGGTGA----AGTT---AAA---- 32511 Query 350353 TGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGT 350412 ||| || || | ||||||| ||||| | || | || ||||||||| |||| || Sbjct 32512 -GATATACTATTGTTAGATGTTACTCCTTTATCATTGGGGGTAGAAACTTTAGGTGGTGT 32570 Query 350413 AATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTC 350472 |||||| ||||| | |||||| ||||||||||| ||||| || || ||| || Sbjct 32571 AATGACAAAAATTATTGCACGAAATACAACTGTACCTACTAAAAAATCAGAAGTTTTCTC 32630 Query 350473 TACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCG 350532 || || |||||||||||| ||| |||||| | | |||| ||||| | Sbjct 32631 AACTGCTGTAGATAATCAGCCGAATGTAGAAATTCATATTCTACAAGGAGAACGAGAATT 32690 Query 350533 CACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTGAAATTCCACCAATGCCTAG 350592 || ||||||||||| | || ||| |||| || || ||| ||| || || Sbjct 32691 TACAAAAGATAATAAAAGCCTAGGAACTTTTAGACTGGATGGTATTATGCCAGCACCAAG 32750 Query 350593 AGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAAATGGTATTTTA 350644 ||| || ||||| || ||||| |||||||||| ||| | |||||||||||| Sbjct 32751 AGGTGTACCTCAAATAGAAGTAACTTTCGATATAGATGCTAATGGTATTTTA 32802 Score = 132 bits (146), Expect = 1e-25 Identities = 582/905 (64%), Gaps = 77/905 (9%) Strand=Plus/Minus Query 182924 TAAAATACCATTAGAGTCAACATCAAATGATACTTCAATCTGTGGAACACCTCGTGGCAT 182983 |||||||||||||| || | ||| || | |||||| || || || ||||||| ||| Sbjct 32802 TAAAATACCATTAGCATCTATATCGAAAGTTACTTCTATTTGAGGTACACCTCTTGGTGC 32743 Query 182984 TGGTGGAAT----TCCAGTTAAAGTAAATTCACCTAATTTATTATTATCTTTAGTTCTTG 183039 ||| ||| |||||| || || ||| ||| | ||||||||||| || | Sbjct 32742 TGGCATAATACCATCCAGTCTAA--AAGTTC--CTAGGCTTTTATTATCTTTTGTAAATT 32687 Query 183040 CTCTCTCGCCTTCATATACT-TGAATAGTAACTGCTGGCTGATTATCACTATAAGTAGAA 183098 ||| || |||| || | | ||||| || ||||||||||| | ||| || Sbjct 32686 CTCGTTCTCCTTG-TAGAATATGAATTTCTACATTCGGCTGATTATCTACAGCAGTTGAG 32628 Query 183099 AAAACTTGCTTTTTATTAATAGGAATAGTTGAATTTCGCGGAACAATTACAGTCATTACT 183158 ||||||| ||| ||| |||| | ||||| |||||| | || |||| |||||||| Sbjct 32627 AAAACTTCTGATTTTTTAGTAGGTACAGTTGTATTTCGTGCAATAATTTTTGTCATTACA 32568 Query 183159 TCTCTGGCAGTTTCTAATCCTAATGATAATGGTGCTACATCTAGTAATAATAAATCTGAT 183218 | | |||||||| || |||||||| || | ||||||| |||| || |||| Sbjct 32567 CCACCTAAAGTTTCTACCCCCAATGATAAAGGAGTAACATCTAACAATAGTATATCT--- 32511 Query 183219 GTTTTATCTGATTTAATATCACTTAAAATTGCAGCTTGAACAGCTGCACCATATGCAACA 183278 ||| || | || ||||| | |||||||||||||| ||| ||||| Sbjct 32510 ---TTAACTTC------ACCAGCTAAAACACCTGCTTGAACAGCTGCTCCAATAGCAACT 32460 Query 183279 GCTTCATCTGGGTTAA----TTGAACGAGATAATTCTTTGCCATTAAAAAATTCTGAAAG 183334 |||||||||| || | |||| || ||||| || || || || | | Sbjct 32459 ACTTCATCTGGATTTACACTTTGATTAGGA----TCTTTACC---AATAATTTTTTTCAC 32407 Query 183335 CATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATACTACTTCATCGATATT 183394 | || ||| || || ||||| || |||||||| ||||| |||| |||||| ||| | Sbjct 32406 TAGTTCTTGTATAGCAGGTATTCTTGTAGAACCACCAACTAAGACTATTTCATCTATACT 32347 Query 183395 ACTTTTACTAATTTGTGAATCTTTTAAAACTTTTTCAACAGG-----GTCCATAGTTTTT 183449 |||| || |||| |||||| ||| | || | ||||| | | | || Sbjct 32346 ACTTGATTCAAGCTGTGCATCTTTCAAAGCATTATTTACAGGTATTTGGCAACGGT---- 32291 Query 183450 CTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAG---ATGaaaaaaaG 183506 || ||||||| | ||| | ||| ||| |||| | |||| || | ||| Sbjct 32290 -CAATTAAATCTTTCGATAGATTTTCAAATTTTGCACGCGTTATAGTTTTTTCTAAATGC 32232 Query 183507 TCAATACCATTAT-AT---AAGGAA-------TCAATTTCAATCGATGTTTGTG-TAGAT 183554 | | ||| ||| || ||| || | ||||| |||| ||||||| || || Sbjct 32231 TTAGGACCTGTATCATTCGAAGTAATAAAAGGTAAATTTATATCG--GTTTGTGATAAAT 32174 Query 183555 GATGATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATG-------A 183607 | ||||| |||||||| ||| ||| | ||| || |||| | | Sbjct 32173 TA-GATAACTCCATTTTAGCTTTTTCTGCAGCTTCTGTTAATCTCTGTAAAGCCTGTCTA 32115 Query 183608 TCTTGGATTATCTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTG 183667 ||||| ||| | ||||| | || || || ||||||||||| ||| | | Sbjct 32114 TCTTGACTTAAAT-TAATACC---TTCATCTT---TTTTAAATTCATCAATTAGCCATAA 32062 Query 183668 AAGTAATCTT-GTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAA 183726 || | ||||| |||||||||| || |||||||| || ||||| || | |||| | || Sbjct 32061 AACT-ATCTTATTATCAAAATCATCTCCACCTAAGTGAGTATCACCTGATGTAGATAAAA 32003 Query 183727 CTTCAAATATTCCGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAAT 183786 | || || | |||||| | | | ||| | || ||||||||||| || || || |||| Sbjct 32002 CCTCGAAAACACCGTCTCCTACTTCTAATACAGAAACATCAAATGTGCCGCCTCCTAAAT 31943 Query 183787 CAAAA 183791 ||||| Sbjct 31942 CAAAA 31938 >seq135 Length=363025 Score = 138 bits (152), Expect = 3e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| || ||||| | | ||||| | ||||||||||||||| ||||| || || || || Sbjct 298625 CATTCCTCCACGGAGACGAAGAACCAAATGAAGAGTAGACTCCTTTTGGATGTTGTAGTC 298684 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || || || || || || || ||||| ||||| || | ||||| ||||| Sbjct 298685 AGAGAGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATAAGCCTCTGCTGGTCAGG 298744 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || |||||||| || | || ||||| ||||| | || || | || Sbjct 298745 CGGGATGCCCTCCTTGTCCTGAATCTTCGTCTTCACATTCTCAATAGTGTCCGAGGCCTC 298804 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| || || || | |||||||| || | || || |||||||||||||| Sbjct 298805 AACCTCCAGGGTGATAGTCTTTCCAGTCAAGGTCTTGACAAAAATCTGCAT 298855 Score = 138 bits (152), Expect = 3e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | || ||||| || || || ||||| || ||||| Sbjct 298853 CATACCACCACGAAGACGCAGCACCAAGTGGAGAGTGGATTCCTTCTGAATGTTGTAATC 298912 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || || || || |||||||| ||||| | ||| ||||| ||||| Sbjct 298913 GGAAAGGGTGCGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGG 298972 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || |||||||| || |||||||| |||| || || || ||||| | || || | || Sbjct 298973 CGGGATTCCTTCCTTGTCCTGAATCTTAGTCTTCACGTTCTCAATGGTGTCCGAAGACTC 299032 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||| ||||| || || || || ||||||||||| Sbjct 299033 GACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 299083 Score = 131 bits (144), Expect = 5e-25 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||| || || | | || || ||||| || ||||| || || || || || || || Sbjct 298397 CATACCGCCGCGAAGGCGAAGCACCAGATGGAGGGTAGATTCCTTCTGGATGTTGTAGTC 298456 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || || || ||||| || || || || || || ||||| || | ||||| ||||| Sbjct 298457 GTTCAACGTACGTCCATCCTCGAGCTGCTTGCCGGCGAAGATAAGCCTCTGCTGGTCAGG 298516 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || ||||||||||| |||| || || || ||||| | || || | || Sbjct 298517 TGGGATACCCTCCTTATCCTGAATCTTAGTCTTCACGTTCTCAATAGTGTCCGAAGACTC 298576 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || ||||| |||| |||||| || ||||| || || ||||||||||||||| Sbjct 298577 GACCTCAAGGGTAATTGTCTTGCCTGTTAGCGTCTTGACAAAAATCTGCATT 298628 Score = 123 bits (136), Expect = 8e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| || ||||| | | || || ||||| ||||||||||| || || || || || || Sbjct 299081 CATGCCTCCACGAAGACGAAGGACGAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTC 299140 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || |||||||| || || || || ||||| || | ||||| ||||| Sbjct 299141 GGAGAGGGTGCGTCCGTCTTCAAGCTGCTTACCGGCGAAGATGAGCCTCTGCTGGTCAGG 299200 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || ||||| || |||||||| || | || ||||| || || | || || | || Sbjct 299201 GGGGATGCCTTCCTTGTCCTGAATCTTCGTCTTCACATTCTCGATGGTGTCCGAGGACTC 299260 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||| ||||| || || || || ||||||||||| Sbjct 299261 GACCTCGAGAGTGATGGTCTTCCCGGTGAGGGTCTTGACGAAAATCTGCAT 299311 Score = 120 bits (132), Expect = 9e-22 Identities = 167/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 140504 TTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATA 140563 |||||||||||| |||| | || || ||||| || ||||| || || || || || || Sbjct 297710 TTACATACCACCGCGTAGACGAAGCACCAGATGGAGGGTAGATTCCTTCTGGATGTTGTA 297769 Query 140564 ATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATC 140623 || || || |||||||| || || || || || || ||||| || | |||||||| Sbjct 297770 GTCGTTCAACGTACGCCCATCCTCGAGCTGCTTGCCGGCGAAGATAAGCCTCTGCTGATC 297829 Query 140624 AGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG 140683 ||| || || || || || |||||||| |||| || || || || || | || || | Sbjct 297830 AGGCGGGATACCCTCCTTGTCCTGAATCTTAGTCTTAACGTTCTCGATGGTGTCCGAAGA 297889 Query 140684 TTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || | ||||| || || || || || ||||| |||||||| Sbjct 297890 CTCGACCTCCAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAGATCTGCAT 297943 Score = 120 bits (132), Expect = 9e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||||||||| || | | || || ||||| |||||||| || || || || || || || Sbjct 297941 CATACCACCGCGAAGGCGAAGCACCAGATGGAGAGTAGATTCCTTCTGGATGTTGTAGTC 298000 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || || |||||||| || || || || ||||| ||||| || | ||||||||||| Sbjct 298001 GTTCAACGTACGCCCATCCTCGAGCTGCTTACCAGCGAAGATAAGCCTCTGCTGATCAGG 298060 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || |||||||| |||| || || || || || | || || | || Sbjct 298061 TGGGATACCCTCCTTGTCCTGAATCTTAGTCTTCACGTTCTCGATGGTGTCCGAAGACTC 298120 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||| || || || || || ||||| |||||||| Sbjct 298121 GACCTCCAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAGATCTGCAT 298171 >seq270 Length=327877 Score = 114 bits (126), Expect = 4e-20 Identities = 76/83 (92%), Gaps = 1/83 (1%) Strand=Plus/Minus Query 235968 TGACACCGTGGCCGAGTGGTTAAGGCGATGGACTGCTAATCCATTTCCCTATGGGATCGC 236027 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| || Sbjct 51896 TGACAACGTGGCCGAGTGGTTAAGGCGATGGACTGCTAATCCATTTCCCTA-GGGAGCGA 51838 Query 236028 GAGTTCGAATCTCGTCGGTGTCG 236050 ||||||||||||| || ||||| Sbjct 51837 GAGTTCGAATCTCTCCGTTGTCG 51815 >seq561 Length=217300 Score = 111 bits (122), Expect = 5e-19 Identities = 190/274 (69%), Gaps = 5/274 (2%) Strand=Plus/Minus Query 349619 ACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATT 349678 || || || ||||| ||||| ||||||||||| ||||| || ||||| ||| |||| Sbjct 203164 ACAGTTCCGGCCTACTTTAACGATGCCCAGCGCTCTGCTACCCGTGATGCGGGCGTCATT 203105 Query 349679 GCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGG 349738 || || || | || || | || || || ||||| || ||||| || | || ||||| Sbjct 203104 GCTGGTTTGGACGTCCTTCGTATCATCAACGAACCTACCGCTGCCGCTTTGGCCTATGGA 203045 Query 349739 CTTGATA----AAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 || || | ||| ||| || | || || |||||||| | || ||| | ||||| || Sbjct 203044 CTGGACAAGACAAAAGAG-GAGGAGGAGAAGAATATTCTCGTCTTCGATCTTGGTGGCGG 202986 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854 |||||| ||||| | | || || |||| |||| | || || || || || Sbjct 202985 TACTTTCGATGTCACCTTGCTCACCATTGACAAGGGCGTGTTCGAGGTCCTTGCTACCAA 202926 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGAT 349888 ||||||||| ||||| || ||||| || || ||| Sbjct 202925 TGGTGATACCCATCTCGGAGGAGAGGACTTCGAT 202892 >seq640 Length=157070 Score = 107 bits (118), Expect = 6e-18 Identities = 67/71 (94%), Gaps = 1/71 (1%) Strand=Plus/Plus Query 235969 GACACCGTGGCCGAGTGGTTAAGGCGATGGACTGCTAATCCATTTCCCTATGGGATCGCG 236028 |||| ||||||||||||||||||||||||||||||||||||||||||||| |||| || | Sbjct 68462 GACAACGTGGCCGAGTGGTTAAGGCGATGGACTGCTAATCCATTTCCCTA-GGGAGCGAG 68520 Query 236029 AGTTCGAATCT 236039 ||||||||||| Sbjct 68521 AGTTCGAATCT 68531 >seq825 Length=440673 Score = 89.7 bits (98), Expect = 2e-12 Identities = 135/188 (72%), Gaps = 7/188 (4%) Strand=Plus/Plus Query 377398 AAATATACGGTACAAGAAGGATTTTTTGGATTTTCAGATAA--TGATAATATTTCTTCAA 377455 ||||| || || ||| ||| |||| | ||| | || | ||||||| || |||||| Sbjct 72560 AAATAAACTGTTAGAGAGGGAGTTTTAGTATTCTTGGAAACGTTGATAAT-TTCCTTCAA 72618 Query 377456 TGCGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTAT 377515 || ||||| ||| | || |||||| || | | ||||| || | || ||||||| Sbjct 72619 A-CGAGGCACGCCAAGGGTGACATTC---TTGGCAGAGACACCTGCGTAATGAAAAGTAT 72674 Query 377516 TAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTT 377575 | ||||| | ||||| | ||||| |||||||||||||| |||||| | |||| | | Sbjct 72675 TGAGAGTCATCTGAGTCGCAGGCTCTCCAATTGACTGCGCAGCAATAGCACCAATATTCT 72734 Query 377576 CTCCAGGA 377583 |||||||| Sbjct 72735 CTCCAGGA 72742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515236422453578