Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chondrus_20crispus_20[genbank_20GCA_5F000350225.2_202013-05-22] 926 sequences; 104,980,420 total letters Query= NC_028773.1 Length=182145 Score E Sequences producing significant alignments: (Bits) Value seq926 87.8 2e-12 seq292 87.8 2e-12 >seq926 Length=180086 Score = 87.8 bits (96), Expect = 2e-12 Identities = 75/91 (82%), Gaps = 5/91 (5%) Strand=Plus/Minus Query 127515 TGGAGAGTTGGCAGAGTTTGGTTTATTGCACCTGACTTGAAATCAGACGATCCCCTAAAA 127574 ||||||| ||| |||||| |||| ||||| |||| ||||||||||| || || | | Sbjct 93672 TGGAGAGGTGGTAGAGTT-GGTTGATTGCGTCTGATTTGAAATCAGATGAACCGC----A 93618 Query 127575 AGGGTCCGTGGGTTCGAATCCCACACTCTCC 127605 ||| |||||||||||||||||||| |||||| Sbjct 93617 AGGTTCCGTGGGTTCGAATCCCACCCTCTCC 93587 >seq292 Length=7051 Score = 87.8 bits (96), Expect = 2e-12 Identities = 75/91 (82%), Gaps = 5/91 (5%) Strand=Plus/Minus Query 127515 TGGAGAGTTGGCAGAGTTTGGTTTATTGCACCTGACTTGAAATCAGACGATCCCCTAAAA 127574 ||||||| ||| |||||| |||| ||||| |||| ||||||||||| || || | | Sbjct 6358 TGGAGAGGTGGTAGAGTT-GGTTGATTGCGTCTGATTTGAAATCAGATGAACCGC----A 6304 Query 127575 AGGGTCCGTGGGTTCGAATCCCACACTCTCC 127605 ||| |||||||||||||||||||| |||||| Sbjct 6303 AGGTTCCGTGGGTTCGAATCCCACCCTCTCC 6273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582729254830800