Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq196 87.8 4e-12 >seq196 Length=16868 Score = 87.8 bits (96), Expect = 4e-12 Identities = 130/185 (70%), Gaps = 6/185 (3%) Strand=Plus/Plus Query 319012 TAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGATCCTCGATGTGGTGGAAA 319071 || ||||| |||| |||| |||||| || | ||| || || | ||||||||||||||| Sbjct 5906 TAGCGCCAGCGGATGTACTCGTTGGGGGTGAGGTCGAGGTGGTGCTCGATGTGGTGGAAC 5965 Query 319072 GCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCCAAACACTACCG------ 319125 || ||||| |||||||| || | ||| || || |||||||| || ||| Sbjct 5966 GCGTGCTGCGCCACGTAGGCGACGCGCGCGTTCGGGTGCTTCCACACCTCGCCGGAGCCC 6025 Query 319126 ATGGTGGCTTCCATTTGTCCCGTGAGCACCTTAATGAGGGTGCTTTTCCCCGCACCGTTT 319185 || || |||| | |||||||||| ||| || | ||| || ||||||||||| Sbjct 6026 TTGTCGGGCTCCAGCTCGCCCGTGAGCAGCTTGATCATCGTGGACTTGCCCGCACCGTTG 6085 Query 319186 TCGCC 319190 |||| Sbjct 6086 GCGCC 6090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057777755901560