Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq2042 111 2e-19 >seq2042 Length=32641 Score = 111 bits (122), Expect = 2e-19 Identities = 136/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGG 145731 ||||| ||| || | ||||||||||| | ||| ||||||||||| || | ||| Sbjct 29988 AGCTGCTCCTTGAGCGCATCCACGTGGTTCAAGTACACGTGCGCGTCGCCGATCGTGTGC 30047 Query 145732 ATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAG 145791 | ||| ||| ||| |||||| || ||||| |||| | | | || ||||| | ||| Sbjct 30048 ACGAACGTGCCGCGCTTGAGGCCGGTCAGGTGCGCGAAGAGGCACGTGAGCAGCGCGTAC 30107 Query 145792 CTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851 ||| |||||||| ||||| |||||||| | ||| |||| |||||||||| || || Sbjct 30108 GAGGCGATGTTGAACGGCACGCCCAGCCCAAGGTCGGCCGATCGCTGGTACAATTGCCAC 30167 Query 145852 GAGAGC 145857 |||||| Sbjct 30168 GAGAGC 30173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590051633224480