Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq3345 179 1e-39 >seq3345 Length=67807 Score = 179 bits (198), Expect = 1e-39 Identities = 222/302 (74%), Gaps = 9/302 (3%) Strand=Plus/Minus Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 ||||||||||| ||||| || ||||| |||||||| ||| ||||||| |||||||| || Sbjct 25931 GCAGTAATTACGGTTCCTGCATATTTTAATGATGCTCAAAGGCAAGCTACTAAAGACGCT 25872 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441 || | || ||||||||| | |||||||| |||||||| || || ||||| || |||| Sbjct 25871 GGTAAAATCGCTGGTTTAGAAGTTCTTCGTATTATTAACGAGCCCACAGCCGCATCTCTT 25812 Query 451442 GCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTT 451501 | ||||| ||| || |||||| | | |||| | || |||| ||||| || Sbjct 25811 TCTTATGGTTTAGATAA---AAAAGATA---ATGAAACA---ATCCTAGTTTTTGACTTA 25761 Query 451502 GGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAG 451561 || || || ||| |||| ||| || ||| | | | ||| || || ||||||||| Sbjct 25760 GGGGGTGGTACTTTTGATGTTTCGGTTCTTGAAGTGGGAGACGGTGTTTTTGAAGTATTA 25701 Query 451562 GCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGAATGG 451621 ||||| |||||||| ||| |||||||||| ||| ||||| | |||||| ||||| Sbjct 25700 GCAACATCAGGTGATACACATTTAGGAGGTGACGATTTTGATGAAAAAATTGTACAATGG 25641 Query 451622 TT 451623 || Sbjct 25640 TT 25639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975632029000496