Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= NC_015283.1 Length=176428 Score E Sequences producing significant alignments: (Bits) Value seq3345 807 0.0 >seq3345 Length=67807 Score = 807 bits (894), Expect = 0.0 Identities = 793/1021 (78%), Gaps = 2/1021 (0%) Strand=Plus/Minus Query 168491 TTCTGCGAATGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGT-GTCTT 168549 ||||||| |||| | || ||| | |||||||| || |||||||||||||| |||| Sbjct 46416 TTCTGCGCATGGATCACTTCAACTGAGAACAGACTATACATTGGTTGGTTCGGTTGTCT- 46358 Query 168550 AATGATCCCATGTTTATTAACAGCAGCAGCATGTTTCATTGTTGCATTTATTGCTGCACC 168609 |||| |||| | || | ||||| || || | || |||| ||||| || ||||| Sbjct 46357 AATGTTCCCTACTCTACTTACAGCTATTTCAGCTTACGTTATTGCTTTTATCGCAGCACC 46298 Query 168610 ACCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAA 168669 || || |||||||| || ||| | || || || || ||| ||||| | || |||||||| Sbjct 46297 TCCAGTAGATATCGATGGTATCCGTGAGCCAGTTGCTGGTTCTCTACTTTACGGAAACAA 46238 Query 168670 CATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAAT 168729 ||||||||| ||||| || |||||| ||||||||| |||||| | |||||||||||||| Sbjct 46237 CATCATCTCTGGTGCTGTAGTTCCAAGTTCAAACGCTATCGGTGTTCACTTCTACCCAAT 46178 Query 168730 TTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAAT 168789 |||||||| ||| |||||||||||||| |||| || |||||| ||||||| | || | Sbjct 46177 CTGGGAAGCTGCTTCAATCGATGAGTGGCTATACAACGGTGGTACTTACCAACTAGTTGT 46118 Query 168790 CTTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAATTATCATACAG 168849 ||||||||| | || || | | ||| ||||| ||| | ||||||| | || ||| | Sbjct 46117 TTTCCACTTCTTCATTGGTGTATGTGCTTACATCGGTCGTGAGTGGGAGCTTTCTTACCG 46058 Query 168850 ACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGC 168909 ||||||||| | || |||||||||||||||| ||||| |||||| ||||||||| ||| Sbjct 46057 TCTAGGTATGCGTCCATGGATCTGTGTTGCTTTCTCAGCTCCAGTAGCTGCAGCATCTGC 45998 Query 168910 AGTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAAT 168969 ||||||| | | |||||| | ||||| ||||||||||| ||||||||||||||||| || Sbjct 45997 AGTATTCGTAATCTACCCAATCGGTCAAGGTTCTTTCTCAGATGGTATGCCTCTAGGTAT 45938 Query 168970 TTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCC 169029 ||||| || |||||||||||| | ||||||||||| ||||||||||| |||||||| || Sbjct 45937 CTCTGGTACTTTCAACTTCATGCTTGTATTCCAAGCTGAGCACAACATCCTTATGCACCC 45878 Query 169030 CTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGG 169089 ||||| ||| || || || ||| | |||||||| ||||||||||| || ||||| || Sbjct 45877 ATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCTCTATTCTCAGCTATGCACGG 45818 Query 169090 TTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGG 169149 ||| || ||||| || ||||||||| | || ||||||||| | |||||| ||||| || Sbjct 45817 TTCTCTAGTAACTTCATCTCTAATCCGTGAAACTACTGAGAACGAATCTGCTAACTACGG 45758 Query 169150 TTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGG 169209 |||||||||||||||||||||||| || || || || |||||||| || || ||||| || Sbjct 45757 TTACAAGTTCGGTCAAGAAGAAGAGACTTACAACATCGTTGCAGCTCACGGTTACTTAGG 45698 Query 169210 TAGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGC 169269 | | || ||||||| || || |||||||||||| | ||||||||| |||||| Sbjct 45697 TCGTCTATTCTTCCAATACGCTTCATTCAACAACTCACGTGCACTTCACTTCGTCCTAGG 45638 Query 169270 AGTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAA 169329 | | ||||| || || | |||||||| ||||||||| | ||| ||||||||||| Sbjct 45637 TGCTTGGCCAGTAGTTGGTATCTGGTTAACATCTATGGGTGTAGCTACTATGGCATTCAA 45578 Query 169330 CTTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTAC 169389 | | ||||| || ||||| ||||| |||||||||||| | ||| | || || Sbjct 45577 CCTAAACGGTTTCAACTTCAACCAGTCAGTTGTAGATTCACAAGGTCGTGTAATCAACAC 45518 Query 169390 ATGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGC 169449 |||| |||| | |||||| | ||||||| ||||||||||| ||||| ||||||||||| Sbjct 45517 TTGGGCTGACATTCTTAACCGTTCAAACCTAGGTATGGAAGTTATGCACGAGCGTAACGC 45458 Query 169450 TCACAACTTCCCACTAGACTTAGCATCTGCTGAGACTACAGAGGTTGCTTTAACTGCACC 169509 |||||||||||| ||||| |||| ||| |||| || | |||||| || ||| || Sbjct 45457 TCACAACTTCCCTCTAGATCTAGCTGCTGGTGAGTCTCTACCAGTTGCTCTAGTTGCTCC 45398 Query 169510 A 169510 | Sbjct 45397 A 45397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564417526565760