Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq3345 720 0.0 >seq3345 Length=67807 Score = 720 bits (798), Expect = 0.0 Identities = 759/992 (77%), Gaps = 10/992 (1%) Strand=Plus/Minus Query 169730 TTGGTTGGTTCGGT-GTCTTGATGATCCCATGTCTATTAGCAGCAG---CAACCTGCTTT 169785 |||||||||||||| |||| ||| |||| |||| | |||| || | | | || Sbjct 46376 TTGGTTGGTTCGGTTGTCTA-ATGTTCCCTACTCTACTTACAGCTATTTCAGCTTACGTT 46318 Query 169786 ATCGTTGCTTTCATCGCAGCTCCACCTGTGGACATCGATGGAATCAGAGAACCTGTAGCA 169845 || |||||| |||||||| || || || || |||||||| ||| | || || || || Sbjct 46317 AT---TGCTTTTATCGCAGCACCTCCAGTAGATATCGATGGTATCCGTGAGCCAGTTGCT 46261 Query 169846 GGTTCATTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCA 169905 ||||| | | || || |||||||||||||||||||| || |||||| ||||||||| Sbjct 46260 GGTTCTCTACTTTACGGAAACAACATCATCTCTGGTGCTGTAGTTCCAAGTTCAAACGCT 46201 Query 169906 ATCGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTAGATGAGTGGTTGTATAAC 169965 |||||| | |||||||| || || |||||||| || | | ||||||||| | || ||| Sbjct 46200 ATCGGTGTTCACTTCTACCCAATCTGGGAAGCTGCTTCAATCGATGAGTGGCTATACAAC 46141 Query 169966 GGTGGTCCTTATCAATTAGTTATCTTCCACTTCCTTATCGGAATCTCTGCCTACATGGGT 170025 |||||| |||| ||| ||||| | ||||||||| | || || | | ||| ||||| ||| Sbjct 46140 GGTGGTACTTACCAACTAGTTGTTTTCCACTTCTTCATTGGTGTATGTGCTTACATCGGT 46081 Query 170026 AGACAGTGGGAACTATCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTAGCATATTCT 170085 | ||||||| || || |||||| ||||||||||||| ||||||||||| || | || Sbjct 46080 CGTGAGTGGGAGCTTTCTTACCGTCTAGGTATGCGTCCATGGATCTGTGTTGCTTTCTCA 46021 Query 170086 GCTCCAGTGTCAGCAGCATTCGCTGTATTCTTAGTGTATCCTTTCGGTCAGGGATCTTTC 170145 |||||||| | ||||||| || |||||| || | || || ||||||| || |||||| Sbjct 46020 GCTCCAGTAGCTGCAGCATCTGCAGTATTCGTAATCTACCCAATCGGTCAAGGTTCTTTC 45961 Query 170146 TCAGACGGAATGCCTCTAGGTATCTCAGGTACATTTAACTTCATGTTCGTATTCCAAGCA 170205 ||||| || ||||||||||||||||| ||||| || ||||||||| | ||||||||||| Sbjct 45960 TCAGATGGTATGCCTCTAGGTATCTCTGGTACTTTCAACTTCATGCTTGTATTCCAAGCT 45901 Query 170206 GAGCACAACATTCTTATGCACCCATTCCATATGGCAGGGGTTGCTGGTATGTTCGGAGGA 170265 ||||||||||| ||||||||||||||||| ||| || ||||||||| | ||||| || Sbjct 45900 GAGCACAACATCCTTATGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGT 45841 Query 170266 GCACTCTTCTCAGCAATGCACGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACAACA 170325 | || |||||||| ||||||||||| || ||||| || ||||||||| | || || || Sbjct 45840 TCTCTATTCTCAGCTATGCACGGTTCTCTAGTAACTTCATCTCTAATCCGTGAAACTACT 45781 Query 170326 GATAACGAGTCACAGAACTATGGATACAAATTCGGACAAGAAGAAGAAACATACAACATT 170385 || ||||| || ||||| || ||||| ||||| ||||||||||| || |||||||| Sbjct 45780 GAGAACGAATCTGCTAACTACGGTTACAAGTTCGGTCAAGAAGAAGAGACTTACAACATC 45721 Query 170386 GTTGCAGCACATGGATACTTTGGTAGACTTATCTTCCAATATGCTAGCTTTAACAATAGT 170445 |||||||| || || ||||| ||| | || |||||||||| ||| || ||||| Sbjct 45720 GTTGCAGCTCACGGTTACTTAGGTCGTCTATTCTTCCAATACGCTTCATTCAACAACTCA 45661 Query 170446 CGTAGTCTTCACTTCTTCCTTGCTACATTCCCTGTAGTATGCATCTGGTTAACTTCAATG 170505 ||| ||||||||| |||| | | | | || ||||| | ||||||||||| || ||| Sbjct 45660 CGTGCACTTCACTTCGTCCTAGGTGCTTGGCCAGTAGTTGGTATCTGGTTAACATCTATG 45601 Query 170506 GGTATTTGCACAATGGCATTTAACCTTAATGGATTTAACTTCAACCAGTCAATCGTAGAT 170565 ||| | || |||||||| ||||| || || || ||||||||||||||| | |||||| Sbjct 45600 GGTGTAGCTACTATGGCATTCAACCTAAACGGTTTCAACTTCAACCAGTCAGTTGTAGAT 45541 Query 170566 GGATCTGGTAAAGTAGTTCCTACATGGGCAGACGTTCTTAACAGAGCAAACCTAGGTATG 170625 | ||| ||| | || ||||| ||| |||||||| | |||||||||||||| Sbjct 45540 TCACAAGGTCGTGTAATCAACACTTGGGCTGACATTCTTAACCGTTCAAACCTAGGTATG 45481 Query 170626 GAAGTAATGCATGAGCGTAATGCACACAACTTCCCACTTGACTTGGCAACTGCTGAGACA 170685 ||||| ||||| |||||||| || ||||||||||| || || | || ||| |||| | Sbjct 45480 GAAGTTATGCACGAGCGTAACGCTCACAACTTCCCTCTAGATCTAGCTGCTGGTGAGTC- 45422 Query 170686 TCT-GAAGTTGCATTAATTGCTCCTTCTGTTG 170716 ||| |||||| || ||||||| |||||| Sbjct 45421 TCTACCAGTTGCTCTAGTTGCTCCAGCTGTTG 45390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582823141532800