Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq3345 791 0.0 >seq3345 Length=67807 Score = 791 bits (876), Expect = 0.0 Identities = 775/994 (78%), Gaps = 4/994 (0%) Strand=Plus/Plus Query 83973 GCAAGATCCAACGGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCG 84032 || ||||| | |||||||| || |||||||| |||||||| ||||||||||| || Sbjct 45434 GCTAGATCTAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATACCTAGGTTT 45493 Query 84033 GCACGATTAAGTACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTC 84092 | ||| ||||| | || ||||| || |||| ||||| ||| ||| |||| | Sbjct 45494 GAACGGTTAAGAATGTCAGCCCAAGTGTTGATTACACGACCTTGTGAATCTACAACTGAC 45553 Query 84093 TGATTGAAGTTAAATCCATTCAGATTAAATGCCATGGT-GCTAACACCCAGAGCAGCAAA 84151 || |||||||| || || || || || |||||||| || ||| ||||||| || | || Sbjct 45554 TGGTTGAAGTTGAAACCGTTTAGGTTGAATGCCATAGTAGCT-ACACCCATAGATGTTAA 45612 Query 84152 CCAAATGCCAACCACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAA 84211 ||| || ||||| |||||||||||| | | || ||||| || | ||| |||||||| Sbjct 45613 CCAGATACCAACTACTGGCCAAGCACCTAGGACGAAGTGAAGTGCACGTGAGTTGTTGAA 45672 Query 84212 GGAAGCATACTGGAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGT 84271 ||||| || ||||||| |||||||| ||||| |||||||| ||||| || || ||||| Sbjct 45673 TGAAGCGTATTGGAAGAATAGACGACCTAAGTAACCGTGAGCTGCAACGATGTTGTAAGT 45732 Query 84272 TTCCTCTTCTTGACCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCG 84331 || ||||||||||||||||||||||| ||||| || | || || |||||||| || Sbjct 45733 CTCTTCTTCTTGACCGAACTTGTAACCGTAGTTAGCAGATTCGTTCTCAGTAGTTTCACG 45792 Query 84332 GATTAGAGAAGAAGTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATAC 84391 ||||||||| ||||| || || ||||| ||||| || |||||||||| ||||||||||| Sbjct 45793 GATTAGAGATGAAGTTACTAGAGAACCGTGCATAGCTGAGAATAGAGAACCACCGAATAC 45852 Query 84392 ACCAGCAACTCCCAACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGAC 84451 ||||||||| || | |||||| || || |||||||||||||| || || || ||||| || Sbjct 45853 ACCAGCAACACCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCTTGGAATAC 45912 Query 84452 AAGCATGTAGTTGAACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAACCTTG 84511 ||||||| ||||||| || || |||||||| || ||||| ||||| |||||||||||||| Sbjct 45913 AAGCATGAAGTTGAAAGTACCAGAGATACCTAGAGGCATACCATCTGAGAAAGAACCTTG 45972 Query 84512 CCCGAAAGGATACACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCAAC 84571 |||| || || | | |||||| |||||||| || || |||||||| ||| ||||||| Sbjct 45973 ACCGATTGGGTAGATTACGAATACTGCAGATGCTGCAGCTACTGGAGCTGAGAAAGCAAC 46032 Query 84572 ACAGATCCATGGACGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCATGTAAGC 84631 ||||||||||||||||||||| ||||| || ||||| ||||| |||||||| |||||||| Sbjct 46033 ACAGATCCATGGACGCATACCTAGACGGTAAGAAAGCTCCCACTCACGACCGATGTAAGC 46092 Query 84632 AAATGCACCAATCAGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATTATATAGCCA 84691 | || ||||||| | |||||| || ||||| ||||| |||| ||||| || |||||||| Sbjct 46093 ACATACACCAATGAAGAAGTGGAAAACAACTAGTTGGTAAGTACCACCGTTGTATAGCCA 46152 Query 84692 TTCGTCCATACTTGCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGCATTAGAGGA 84751 || || || || |||||||| || || ||||| || | ||| ||||| || || Sbjct 46153 CTCATCGATTGAAGCAGCTTCCCAGATTGGGTAGAAGTGAACACCGATAGCGTTTGAACT 46212 Query 84752 TGGAACTACGGCACCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGCGACTGGCTC 84811 ||||||||| |||||||| ||||||||||||||||| | ||||||||||| |||||||| Sbjct 46213 TGGAACTACAGCACCAGAGATGATGTTGTTTCCGTAAAGTAGAGAACCAGCAACTGGCTC 46272 Query 84812 ACGGATACCGTCAATATCAACTGGGGGTGCACCAACGAATGCAATGATG-AAACAGACAG 84870 ||||||||| || ||||| ||||| ||||| | | || ||||| | | || | || | Sbjct 46273 ACGGATACCATCGATATCTACTGGAGGTGCTGCGATAAAAGCAATAACGTAAGCTGA-AA 46331 Query 84871 TGGCAGCAAGTAGAGTTGGAATCATAAGAGTTCCAAACCAACCAACATAGATACGGTTGT 84930 | || | ||||||||| || | ||| ||| || |||||||||| || | | ||| | Sbjct 46332 TAGCTGTAAGTAGAGTAGGGAACATTAGACAACCGAACCAACCAATGTATAGTCTGTTCT 46391 Query 84931 TAGTGGAGGTGACCCAATCACAGAAGTTCTGCCA 84964 ||| || |||| ||| | ||||| | || ||| Sbjct 46392 CAGTTGAAGTGATCCATGCGCAGAATTGCTCCCA 46425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571249235180960