Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq3345 96.9 3e-14 >seq3345 Length=67807 Score = 96.9 bits (106), Expect = 3e-14 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 |||||||| || || || |||||||||||||| | ||| | |||||||||||||| ||| Sbjct 25931 GCAGTAATTACGGTTCCTGCATATTTTAATGATGCTCAAAGGCAAGCTACTAAAGACGCT 25872 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 || || ||||| | | |||||||||||||| || || || || || || | ||| Sbjct 25871 GGTAAAATCGCTGGTTTAGAAGTTCTTCGTATTATTAACGAGCCCACAGCCGCATCTCTT 25812 Query 550520 GCATATGGACTTGATAAA 550537 | ||||| | |||||| Sbjct 25811 TCTTATGGTTTAGATAAA 25794 Score = 91.5 bits (100), Expect = 1e-12 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 361705 ACCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGC 361764 |||||||| | || || ||||| || |||||||| || || ||| | | || || Sbjct 25803 ACCATAAGAAAGAGATGCGGCTGTGGGCTCGTTAATAATACGAAGAACTTCTAAACCAGC 25862 Query 361765 TATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGT 361824 ||||| || ||| ||| ||||| | ||| ||||||||||||||||||||||| || Sbjct 25863 GATTTTACCAGCGTCTTTAGTAGCTTGCCTTTGAGCATCATTAAAATATGCAGGAACCGT 25922 Query 361825 AATCACTGCTTTTTCAAC 361842 ||| ||||||| || ||| Sbjct 25923 AATTACTGCTTGTTTAAC 25940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029115558051880