Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq3345 535 1e-147 >seq3345 Length=67807 Score = 535 bits (592), Expect = 1e-147 Identities = 717/992 (72%), Gaps = 4/992 (0%) Strand=Plus/Minus Query 25823 ACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTTATGATACCCTGCT-TACTCGC 25881 ||||||||| | || || | || |||||||| || ||| | |||| || |||| | Sbjct 46395 ACTGAGAACAGACTATACATTGGTTGGTTCGGTTGTCTAATGTT-CCCTACTCTACTTAC 46337 Query 25882 AGCCACTACATGTTTTATACTTGCCTTCATCGCAGCACCGCCTGTAGATATAGATGGCAT 25941 ||| | | || || | |||| || ||||||||||| || |||||||| ||||| || Sbjct 46336 AGCTATTTCAGCTTACGTTATTGCTTTTATCGCAGCACCTCCAGTAGATATCGATGGTAT 46277 Query 25942 ACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATAATATCAGGAGCAGTCGT 26001 |||||||||||| | || || || | ||||||||||| || || || || || || || Sbjct 46276 CCGTGAGCCAGTTGCTGGTTCTCTACTTTACGGAAACAACATCATCTCTGGTGCTGTAGT 46217 Query 26002 CCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGATCTGGGAAGCTGGCACACTGGA 26061 || || ||||| ||||| | || || ||||| ||||||||||||| || | || Sbjct 46216 TCCAAGTTCAAACGCTATCGGTGTTCACTTCTACCCAATCTGGGAAGCTGCTTCAATCGA 46157 Query 26062 CGAGTGGCTATACAATGGCGGACCATATCAACTCATTATCTTCCACTTCTTAATAGGAGT 26121 |||||||||||||| || || | || ||||| || | ||||||||||| || || || Sbjct 46156 TGAGTGGCTATACAACGGTGGTACTTACCAACTAGTTGTTTTCCACTTCTTCATTGGTGT 46097 Query 26122 AGCAGCATATGCAGGGAGACAGTGGGAACTATCTTACAGACTAGGAATGAGACCATGGAT 26181 | || || || | ||||||| || |||||| | ||||| ||| | |||||||| Sbjct 46096 ATGTGCTTACATCGGTCGTGAGTGGGAGCTTTCTTACCGTCTAGGTATGCGTCCATGGAT 46037 Query 26182 ATTTGTTGCATATACAGCACCACTATCCGCAGC-TCTCGCAGTGTTCTTAGTTTATCCTT 26240 | |||||| | |||| ||| || | ||||| ||| ||||| ||| || | || || Sbjct 46036 CTGTGTTGCTTTCTCAGCTCCAGTAGCTGCAGCATCT-GCAGTATTCGTAATCTACCCAA 45978 Query 26241 TCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGTATCTCTGGTACTTTTAACTTTA 26300 |||| ||||| ||| ||||| |||||||| ||||||||||||||||| ||||| | Sbjct 45977 TCGGTCAAGGTTCTTTCTCAGATGGTATGCCTCTAGGTATCTCTGGTACTTTCAACTTCA 45918 Query 26301 TGTTCGTATTCCAAGCAGAACATAATATACTCATGCACCCATTCCATATGGCTGGTGTTG 26360 || | ||||||||||| || || || || || |||||||||||||| ||| |||||||| Sbjct 45917 TGCTTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTCCACATGCTTGGTGTTG 45858 Query 26361 CTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACGGAAGTTTGGTTACTTCCTCAC 26420 |||| || |||||||| |||| ||| | ||||||||||| | | || ||||| || | Sbjct 45857 CTGGTGTATTCGGTGGTTCTCTATTCTCAGCTATGCACGGTTCTCTAGTAACTTCATCTC 45798 Query 26421 TTATTGCAGAAACGACAGAGGAAGTCTCACAGAATTATGGCTATAAGTTTGGGCAAGATG 26480 | || ||||| || ||| | | || || || || || ||||| || ||||| | Sbjct 45797 TAATCCGTGAAACTACTGAGAACGAATCTGCTAACTACGGTTACAAGTTCGGTCAAGAAG 45738 Query 26481 AAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTAATTTTTCAGTATG 26540 ||||||| || || || || || || ||||| ||||| || | || | || || || | Sbjct 45737 AAGAGACTTACAACATCGTTGCAGCTCACGGTTACTTAGGTCGTCTATTCTTCCAATACG 45678 Query 26541 CGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTGCTACTTGGCCGGTTGTTGGCA 26600 | || || ||| ||| | ||||| ||| | || | | ||||||| || ||||| | Sbjct 45677 CTTCATTCAACAACTCACGTGCACTTCACTTCGTCCTAGGTGCTTGGCCAGTAGTTGGTA 45618 Query 26601 TATGGCTGACATCTATGGGTATCTGCACAATGGCATTTAACCTAAATGGTTTTAACTTTA 26660 | ||| | |||||||||||| | || |||||||| |||||||| ||||| ||||| | Sbjct 45617 TCTGGTTAACATCTATGGGTGTAGCTACTATGGCATTCAACCTAAACGGTTTCAACTTCA 45558 Query 26661 ACCAGTCAGTAGTAGATGTTAATGGAAAGATAATACCTACATGGGCTGATGTATTAAACC 26720 |||||||||| |||||| | || |||| || |||||||| | | |||| Sbjct 45557 ACCAGTCAGTTGTAGATTCACAAGGTCGTGTAATCAACACTTGGGCTGACATTCTTAACC 45498 Query 26721 GAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATGCTCATAACTTTCCACTTGACT 26780 | | ||||| || | |||||||||||||||||||| ||||| ||||| || || || Sbjct 45497 GTTCAAACCTAGGTATGGAAGTTATGCACGAGCGTAACGCTCACAACTTCCCTCTAGATC 45438 Query 26781 TAGCATCATCTGAGTCAACACAAGTTGCACTA 26812 |||| | |||||| || |||||| ||| Sbjct 45437 TAGCTGCTGGTGAGTCTCTACCAGTTGCTCTA 45406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146720455013088