Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= NC_019444.1 Length=176043 Score E Sequences producing significant alignments: (Bits) Value seq3345 774 0.0 >seq3345 Length=67807 Score = 774 bits (858), Expect = 0.0 Identities = 813/1062 (77%), Gaps = 5/1062 (0%) Strand=Plus/Minus Query 162892 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 162951 ||||||| ||| | ||||| || | ||| | || || | ||||||||||| || Sbjct 46416 TTCTGCGCATGGATCACTTCAACTGAGAACAGACTATACATTGGTTGGTTCGGTTGTCTA 46357 Query 162952 ATGATTCCAACTCTGTTGGCAGCAACTATCTGTTT-CATCGTCGCCTTCGTCGCTGCTCC 163010 ||| | || ||||| | |||| | | || | || | | | || || |||| || || Sbjct 46356 ATGTTCCCTACTCTACTTACAGCTATT-TCAGCTTACGTTATTGCTTTTATCGCAGCACC 46298 Query 163011 CCCTGTGGACATTGACGGCATCCGTGAGCCCGTCGCTGGTTCACTCATGTATGGCAACAA 163070 || || || || || || ||||||||||| || |||||||| || | || || ||||| Sbjct 46297 TCCAGTAGATATCGATGGTATCCGTGAGCCAGTTGCTGGTTCTCTACTTTACGGAAACAA 46238 Query 163071 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 163130 ||||||||||||||| || |||||| ||| ||||| || ||| |||||||||| || || Sbjct 46237 CATCATCTCTGGTGCTGTAGTTCCAAGTTCAAACGCTATCGGTGTTCACTTCTACCCAAT 46178 Query 163131 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 163190 ||||||||| || ||| | ||||||||||| || ||||||||| ||| |||||| || || Sbjct 46177 CTGGGAAGCTGCTTCAATCGATGAGTGGCTATACAACGGTGGTACTTACCAACTAGTTGT 46118 Query 163191 CTTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAATGGGAACTTTCATATCG 163250 || |||||| | || || | | ||| || || || ||||| ||||| ||||| || || Sbjct 46117 TTTCCACTTCTTCATTGGTGTATGTGCTTACATCGGTCGTGAGTGGGAGCTTTCTTACCG 46058 Query 163251 CTTAGGTATGCGCCCCTGGATCTGTGTAGCATACTCTGCACCTGTTGCAGCAGCATCCGC 163310 |||||||||| || ||||||||||| || | ||| || || || || |||||||| || Sbjct 46057 TCTAGGTATGCGTCCATGGATCTGTGTTGCTTTCTCAGCTCCAGTAGCTGCAGCATCTGC 45998 Query 163311 AGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCACTTGGCAT 163370 ||| ||| | |||| || ||||||||||||||||||| || | ||||| || || || Sbjct 45997 AGTATTCGTAATCTACCCAATCGGTCAAGGTTCTTTCTCAGATGGTATGCCTCTAGGTAT 45938 Query 163371 CTCTGGCACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCC 163430 |||||| || ||||||| ||||||||| |||||||| |||||||||||||| |||||||| Sbjct 45937 CTCTGGTACTTTCAACTTCATGCTTGTATTCCAAGCTGAGCACAACATCCTTATGCACCC 45878 Query 163431 CTTCCATATGTTGGGAGTCGCTGGTGTCTTCGGTGGATCACTCTTCTCGGCAATGCATGG 163490 ||||| ||| | || || |||||||| |||||||| || || ||||| || ||||| || Sbjct 45877 ATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCTCTATTCTCAGCTATGCACGG 45818 Query 163491 CAGTCTTGTTACCTCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAAAACTATGG 163550 ||| || || || || || ||||||| || ||||| | || || ||||| || Sbjct 45817 TTCTCTAGTAACTTCATCTCTAATCCGTGAAACTACTGAGAACGAATCTGCTAACTACGG 45758 Query 163551 TTACAAGTTTGGTCAAGAAGAAGAGACATACAACATCGTTGCAGCACATGGCTACTTCGG 163610 ||||||||| ||||||||||||||||| ||||||||||||||||| || || ||||| || Sbjct 45757 TTACAAGTTCGGTCAAGAAGAAGAGACTTACAACATCGTTGCAGCTCACGGTTACTTAGG 45698 Query 163611 TCGTTTGATCTTCCAATATGCATCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTGGC 163670 |||| | |||||||||| || |||||||||||| | ||||||||| |||| | Sbjct 45697 TCGTCTATTCTTCCAATACGCTTCATTCAACAACTCACGTGCACTTCACTTCGTCCTAGG 45638 Query 163671 AGCATGGCCTGTCGTCGGAATCTGGTTTACTGCACTGGGCGTAAGCACCATGGCATTCAA 163730 || ||||| || || || |||||||| || | |||| ||| || ||||||||||| Sbjct 45637 TGCTTGGCCAGTAGTTGGTATCTGGTTAACATCTATGGGTGTAGCTACTATGGCATTCAA 45578 Query 163731 CCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGCTCAACAC 163790 ||| ||||||||||||||||||||||| | | ||| || |||||||| ||||||| Sbjct 45577 CCTAAACGGTTTCAACTTCAACCAGTCAGTTGTAGATTCACAAGGTCGTGTAATCAACAC 45518 Query 163791 TTGGGCAGACGTGCTTAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGC 163850 |||||| ||| | |||||||| | || ||||||||||||||||| ||||||||||| Sbjct 45517 TTGGGCTGACATTCTTAACCGTTCAAACCTAGGTATGGAAGTTATGCACGAGCGTAACGC 45458 Query 163851 ACACAACTTCCCACTCGATCTTGCTGCTGCTGAGTCCACTCCTGTGGCGCTTTCAGCACC 163910 ||||||||||| || ||||| ||||||| |||||| || || || || || || Sbjct 45457 TCACAACTTCCCTCTAGATCTAGCTGCTGGTGAGTCTCTACCAGTTGCTCTAGTTGCTCC 45398 Query 163911 TGCTATCGGTTGATAATTA-TACAATCTA-TAGTATAATAAA 163950 ||| | | | |||||| ||||||||| || | ||||||| Sbjct 45397 AGCTGTTGCTGCGTAATTAGTACAATCTAGTACT-TAATAAA 45357 Score = 545 bits (604), Expect = 3e-150 Identities = 726/1006 (72%), Gaps = 2/1006 (0%) Strand=Plus/Plus Query 164619 GATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGGTGGTCTGGATTACTACTTCTT 164678 ||||||||||| || || || || || ||||| || || ||||||||| | || | | || Sbjct 59805 GATGACTGGCTAAAGCGTGACCGTTTCGTTTTCGTTGGATGGTCTGGACTTCTTC-TATT 59863 Query 164679 CCCA-CTGCTTATCTGGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTCACGAGTTG 164737 |||| ||| | || || | || |||||||| ||||| | |||| || || ||| Sbjct 59864 CCCATGTGCATTCCTAGCTGTAGGTGGTTGGCTAACTGGTATTACTTTCGTAACATCTTG 59923 Query 164738 GTACACCCATGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTCACAGCAGCTGT 164797 |||||| || ||||| || ||| | || ||||| |||||| || || || ||||| Sbjct 59924 GTACACTCACGGTCTAGCAAGTTCGTTCCTAGAAGGATGTAACTTCCTAACTGCTGCTGT 59983 Query 164798 CTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCA 164857 || || |||||| | ||||||||| || || || || | ||||| ||||| | || Sbjct 59984 ATCTACTCCTGCTAACAGTATGGGTCACTCACTACTACTTATCTGGGGACCTGAAGCACA 60043 Query 164858 GGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCACGG 164917 || | || || |||| |||| |||| || || ||| ||| | || || ||||| Sbjct 60044 AGGTGACATCACTCGTTGGTTCCAAATTGGTGGTCTTTGGGCTTTTATTGCACTACACGG 60103 Query 164918 TGCCTTCGCCCTAATTGGTTTCATGCTCCGCCAGTTTGAGCTGGCACGTCTCATTGGTAT 164977 | | || | ||||||||||| || | ||||||||| | || ||| | | ||||| Sbjct 60104 TTCGTTTGGTGTAATTGGTTTCTGTCTTAGACAGTTTGAGATCGCTCGTTTAGTAGGTAT 60163 Query 164978 CCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCT 165037 ||||||||||| || || || ||||||||||| || || || || || | || ||||| Sbjct 60164 TCGTCCTTACAACGCAATCGCTTTCTCTGGTCCAATCGCCGTATTCGTTACAGTTTTCCT 60223 Query 165038 TATCTACCCACTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAAT 165097 | ||||| | ||||| | |||||||| || || || ||||| || || ||||| Sbjct 60224 AGTTTACCCTTTAGGTCAAGCAAGTTGGTTCTTTGCACCAAGTTTTGGTGTAGCGGCAAT 60283 Query 165098 CTTTAGATTCCTGTTGTTCCTTCAAGGATTCCACAACTGGACCCTCAACCCCTTCCATAT 165157 || | ||||| | ||||| ||||| |||||||||||||| || ||||| ||||| || Sbjct 60284 TTTCCGTTTCCTTCTTTTCCTACAAGGTTTCCACAACTGGACTCTTAACCCATTCCACAT 60343 Query 165158 GATGGGTGTTGCAGGTATCTTGGGAGGAGCATTGCTATCTGCTATTCATGGAGTCACAGT 165217 |||||| || || |||||| | || || || || |||| |||||||||||| | || || Sbjct 60344 GATGGGCGTAGCTGGTATCCTTGGTGGTGCCTTACTATGTGCTATTCATGGTGCGACTGT 60403 Query 165218 TGAAAATACATTATACGAGGATGGAGAGCAGGCAAATACCTTTAAGGCGTTTGATTCGAC 165277 || || || | | ||| ||||| || || || || || || || | | || Sbjct 60404 AGAGAACACTCTTTTCGAAGATGGTGATGCTGCGAACACTTTCCGTGCATTCACTCCAAC 60463 Query 165278 ACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGG 165337 ||| |||||||||||| || ||||| ||||||||||| |||||||| ||||| || || Sbjct 60464 ACAATCAGAAGAGACTTACTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATTTTTGG 60523 Query 165338 CATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGG 165397 |||| || ||||||||||| ||| | || || |||||| | || || || || || Sbjct 60524 TGTTGCATTCTCTAACAAGCGTTGGTTACACTTCTTCATGCTTTTCGTACCAGTAGCTGG 60583 Query 165398 TCTTTGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTT 165457 | | |||||| | || || ||| | ||| | || || ||||| ||||| |||||||| Sbjct 60584 TATGTGGACAAGTGCGATCGGTATTGTAGGTTTAGCACTAAACCTGCGTGCATACGATTT 60643 Query 165458 CGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTACACCAAAAA 165517 ||| || ||| | ||||| |||||||| || ||||| || || |||||||| ||||| Sbjct 60644 CGTTTCGCAAGAGCTTAGAGCCGCAGAAGACCCTGAATTCGAAACATTCTACACGAAAAA 60703 Query 165518 CATCCTATTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCCCATGAAAA 165577 || ||| | |||||||| | ||||| ||| |||| | |||||||| |||||||| Sbjct 60704 CAACCTTCTAAATGAAGGTATCCGTGCGTGGATGGCTGCACAAGATCAACCTCATGAAAA 60763 Query 165578 CTTTATCTTCCCAGAAGAAGTATTGCCTAGAGGCAACGCCCTTTAA 165623 ||| |||||||| || || ||| | || | || |||||||||||| Sbjct 60764 CTTCATCTTCCCTGAGGAGGTACTACCACGTGGAAACGCCCTTTAA 60809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563185579110560