Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= NC_020838.1 Length=45728 Score E Sequences producing significant alignments: (Bits) Value seq3345 610 2e-170 >seq3345 Length=67807 Score = 610 bits (676), Expect = 2e-170 Identities = 736/997 (74%), Gaps = 8/997 (1%) Strand=Plus/Plus Query 21471 GCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTG 21530 || || || || ||||||||||| ||||| ||||| ||||| || || | || ||||| Sbjct 45434 GCTAGATCTAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATACCTAGGTTT 45493 Query 21531 GCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGAT 21590 | ||||||||||||||||||||| |||||||| || | || | | | ||| | || Sbjct 45494 GAACGGTTAAGAATGTCAGCCCAAGTGTTGATTACACGACCTTGTGAATCTACAACTGAC 45553 Query 21591 TGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAAC 21650 ||||| ||||||||||| || | |||||| ||||| |||| || || | | | ||| Sbjct 45554 TGGTTGAAGTTGAAACCGTTTAGGTTGAATGCCATAGTAGCTACACCCATAGATGTTAAC 45613 Query 21651 CAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAG 21710 || ||||| || || ||||| ||| | || | ||| ||||| ||| || || || || Sbjct 45614 CAGATACCAACTACTGGCCAAGCACCTAGGACGAAGTGAAGTGCACGTGAGTTGTTGAAT 45673 Query 21711 CTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAGTC 21770 ||| |||||||||| || ||||| || || |||||||| ||||| || ||||||||| Sbjct 45674 GAAGCGTATTGGAAGAATAGACGACCTAAGTAACCGTGAGCTGCAACGATGTTGTAAGTC 45733 Query 21771 TCTTCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAGTCGTCTCACGA 21830 ||||| |||||||| ||||||||||| ||||| || | | ||||| || ||||| Sbjct 45734 TCTTCTTCTTGACCGAACTTGTAACCGTAGTTAGCAGATTCGTTCTCAGTAGTTTCACGG 45793 Query 21831 ATGAGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCCCACCAAATACG 21890 || || || || || || || |||||||||||| ||||| | | ||||| ||||| Sbjct 45794 ATTAGAGATGAAGTTACTAGAGAACCGTGCATAGCTGAGAATAGAGAACCACCGAATACA 45853 Query 21891 CCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAGCCTGGAACACC 21950 || || ||||| |||||||| || || |||||||| || ||||||||||| ||||| || Sbjct 45854 CCAGCAACACCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCTTGGAATACA 45913 Query 21951 AGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAAAAGAGCCCTGT 22010 |||||| ||||||| || || || || || | |||||| |||| || ||||| || || Sbjct 45914 AGCATGAAGTTGAAAGTACCAGAGATACCTAGAGGCATACCATCTGAGAAAGAACCTTGA 45973 Query 22011 CCAAACGGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAGAGTACGCAACA 22070 || | || || | | ||| || |||| || || || || ||||| ||| | |||||| Sbjct 45974 CCGATTGGGTAGATTACGAATACTGCAGATGCTGCAGCTACTGGAGCTGAGAAAGCAACA 46033 Query 22071 AAGATCCAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTCCCATGTAAGCA 22130 ||||||| || | ||| ||||| || || ||| |||||||| || || ||||||||| Sbjct 46034 CAGATCCATGGACGCATACCTAGACGGTAAGAAAGCTCCCACTCACGACCGATGTAAGCA 46093 Query 22131 AAGACGCCAATGAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGTTGTACAGCCAT 22190 | || ||||||| ||||||||| || |||||| | | ||| |||||||| ||||| Sbjct 46094 CATACACCAATGAAGAAGTGGAAAACAACTAGTTGGTAAGTACCACCGTTGTATAGCCAC 46153 Query 22191 TCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGGCATTACTGCTC 22250 ||||| | || |||||||||||| |||||||||||||| | ||||| || || || Sbjct 46154 TCATCGATTGAAGCAGCTTCCCAGATTGGGTAGAAGTGAACACCGATAGCGTTTGAACTT 46213 Query 22251 GGAACGACGGCTCCTGATATGATGTTGTTACCATACAACAGGGAGCCAGCGACGGGTTCT 22310 ||||| || || || || ||||||||||| || || | || || ||||| || || || Sbjct 46214 GGAACTACAGCACCAGAGATGATGTTGTTTCCGTAAAGTAGAGAACCAGCAACTGGCTCA 46273 Query 22311 CGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAAAGGCGATAATAAAACAAGTTG-- 22368 ||||| |||||||| || || || ||||| | | ||| || ||||| ||| || Sbjct 46274 CGGATACCATCGATATCTACTGGAGGTGCTGCGATAAAAGC---AATAACGTAAGCTGAA 46330 Query 22369 -TAGCGGCAAGGAG-GCACGGAATCATAAGGACTCCGAACCATCCTACATAAAGACGGTT 22426 |||| | ||| || | | |||| ||| || |||||||| || | || || | ||| Sbjct 46331 ATAGCTGTAAGTAGAGTAGGGAA-CATTAGACAACCGAACCAACCAATGTATAGTCTGTT 46389 Query 22427 ATTAGTAGAGGTGACCCAGGAACAAAACTGCTCCCAG 22463 | ||| || |||| ||| | || || ||||||||| Sbjct 46390 CTCAGTTGAAGTGATCCATGCGCAGAATTGCTCCCAG 46426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146202076017360