Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq3345 755 0.0 >seq3345 Length=67807 Score = 755 bits (836), Expect = 0.0 Identities = 775/1010 (77%), Gaps = 2/1010 (0%) Strand=Plus/Plus Query 124025 GCAACCTGTGTAGACTCAGCAGATGCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCA 124084 ||||| || ||||||| ||| ||||| ||||| ||||||||||| || || | || Sbjct 45410 GCAACTGGTAGAGACTCACCAGCAGCTAGATCTAGAGGGAAGTTGTGAGCGTTACGCTCG 45469 Query 124085 TGCATAACTTCCATACCCAAGTTTGCTCTGTTTAGAACATCACCCCATGTTGGGACGATT 124144 ||||||||||||||||| | ||||| | ||| |||| ||| |||| || || | Sbjct 45470 TGCATAACTTCCATACCTAGGTTTGAACGGTTAAGAATGTCAGCCCAAGTGTTGATTACA 45529 Query 124145 TTTCCGTTAGCATCAACAACTGATTGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATT 124204 || | | ||| |||||||| ||||| ||||||||||| || | |||||||||||| Sbjct 45530 CGACCTTGTGAATCTACAACTGACTGGTTGAAGTTGAAACCGTTTAGGTTGAATGCCATA 45589 Query 124205 GTGCAGATACCCATAGAGGTTAACCATACACATACAACAGGGAAAACTGCTAGGAAGAAG 124264 || | ||||||||| |||||||| | || || || || || | |||||| |||| Sbjct 45590 GTAGCTACACCCATAGATGTTAACCAGATACCAACTACTGGCCAAGCACCTAGGACGAAG 45649 Query 124265 TGAAGACTTCTTGAGTTGTTGAATGAAGCATACTGGAAGATAAGACGACCAAAGTAACCG 124324 ||||| | |||||||||||||||||| || ||||||| |||||||| ||||||||| Sbjct 45650 TGAAGTGCACGTGAGTTGTTGAATGAAGCGTATTGGAAGAATAGACGACCTAAGTAACCG 45709 Query 124325 TGTGCTGCTACTATGTTGTATGTTTCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGT 124384 || ||||| || |||||||| || ||||||||||| |||||||| ||||| ||||| Sbjct 45710 TGAGCTGCAACGATGTTGTAAGTCTCTTCTTCTTGACCGAACTTGTAACCGTAGTTAGCA 45769 Query 124385 GACTCTTGCTCTGTTGTTTCTCTGATTAGAGAAGATGTAACAAGAGAACCATGCATTGCT 124444 || || | ||| || ||||| | ||||||||| || || || |||||||| ||||| ||| Sbjct 45770 GATTCGTTCTCAGTAGTTTCACGGATTAGAGATGAAGTTACTAGAGAACCGTGCATAGCT 45829 Query 124445 GAGAATAAAGATCCTCCGAACATTCCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGA 124504 ||||||| ||| || ||||| | || || || || ||||||||| || ||||| || Sbjct 45830 GAGAATAGAGAACCACCGAATACACCAGCAACACCAAGCATGTGGAATGGGTGCATAAGG 45889 Query 124505 ATGTTATGCTCTGCTTGGAAAACGAACATAAAGTTGAAAGTACCTGAGATACCAAGTGGC 124564 ||||| ||||| |||||||| || | ||| |||||||||||||| |||||||| || ||| Sbjct 45890 ATGTTGTGCTCAGCTTGGAATACAAGCATGAAGTTGAAAGTACCAGAGATACCTAGAGGC 45949 Query 124565 ATACCATCAGAGAATGAACCCTGACCAAATGGGTATACTAAGAATACAGCGAATGCAGCA 124624 |||||||| ||||| ||||| ||||| | |||||| | || |||||| || |||| ||| Sbjct 45950 ATACCATCTGAGAAAGAACCTTGACCGATTGGGTAGATTACGAATACTGCAGATGCTGCA 46009 Query 124625 GATACTGGTGCTGAATAAGCAACACAGATCCAAGGACGCATTCCTAATCTGTATGATAGT 124684 | |||||| ||||| |||||||||||||||| |||||||| |||| | ||| || || Sbjct 46010 GCTACTGGAGCTGAGAAAGCAACACAGATCCATGGACGCATACCTAGACGGTAAGAAAGC 46069 Query 124685 TCCCACTGTCTTCCCATGTATGCTGAAATACCAATAAGGAAGTGGAAAATTACCAACTGA 124744 ||||||| | || ||||| || | | |||||| | ||||||||||| || | || Sbjct 46070 TCCCACTCACGACCGATGTAAGCACATACACCAATGAAGAAGTGGAAAACAACTAGTTGG 46129 Query 124745 TAAGGACCACCATTATACAACCATTCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAG 124804 |||| |||||| || || | ||| ||||| | | || ||||||||||||||||||||| Sbjct 46130 TAAGTACCACCGTTGTATAGCCACTCATCGATTGAAGCAGCTTCCCAGATTGGGTAGAAG 46189 Query 124805 TGTAGTCCGATAGCGTTTGATGATGGAACAACTGCACCAGAGATGATGTTGTTACCATAT 124864 || | |||||||||||||| |||||| || |||||||||||||||||||| || || Sbjct 46190 TGAACACCGATAGCGTTTGAACTTGGAACTACAGCACCAGAGATGATGTTGTTTCCGTAA 46249 Query 124865 AAGAAAGAACCCGCTACTGGTTCTCTGATTCCGTCGATATCGACAGGAGGTGCTGCAATA 124924 | | |||||| || ||||| || | ||| || |||||||| || ||||||||||| ||| Sbjct 46250 AGTAGAGAACCAGCAACTGGCTCACGGATACCATCGATATCTACTGGAGGTGCTGCGATA 46309 Query 124925 AATGCAACGATGAAACATGCTGCTGCTGTGAGTA-AGCATGGAATCATTAGAACACCAAA 124983 || |||| | | || || ||||| |||| || | |||| ||||||| ||| || Sbjct 46310 AAAGCAATAACGTAAGCTGAAATAGCTGTAAGTAGAGTAGGGAA-CATTAGACAACCGAA 46368 Query 124984 CCAACCAACATAAATTCTGTTGTTTGTTGATGTTACCCACTCACAGAATT 125033 |||||||| || | |||||| | ||||| || | ||| | ||||||| Sbjct 46369 CCAACCAATGTATAGTCTGTTCTCAGTTGAAGTGATCCATGCGCAGAATT 46418 Score = 520 bits (576), Expect = 1e-142 Identities = 743/1043 (71%), Gaps = 31/1043 (3%) Strand=Plus/Minus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | ||||| || || || ||||| | || || ||||| ||||| Sbjct 60809 TTAAAGGGCGTTTCCACGTGGTAGTACCTCCTCAGGGAAGATGAAGTTTTCATGAGGTTG 60750 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || | | |||||| || | || |||||||| ||||| |||| ||||| ||||| Sbjct 60749 ATCTTGTGCAGCCATCCACGCACGGATACCTTCATTTAGAAGGTTGTTTTTCGTGTAGAA 60690 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 || ||||| || ||||||||||| ||||| | |||||| || || || |||||||| | Sbjct 60689 TGTTTCGAATTCAGGGTCTTCTGCGGCTCTAAGCTCTTGCGAAACGAAATCGTATGCACG 60630 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 ||||| ||||||| |||||| ||||| || | |||||||||||| || || || Sbjct 60629 CAGGTTTAGTGCTAAACCTACAATACCGATCGCACTTGTCCACATACCAGCTACTGGTAC 60570 Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165 ||| | ||| | ||||||||| | | |||||||| ||||| | |||||| ||||| || Sbjct 60569 GAAAAGCATGAAGAAGTGTAACCAACGCTTGTTAGAGAATGCAACACCAAAAATCTGAGA 60510 Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225 |||||| | ||| || |||| ||| ||||| |||||| ||||| ||| |||||| Sbjct 60509 CCAGAAACGGTTTGCAGTAACCATTGAGTAAGTCTCTTCTGATTGTGTTGGAGTGAATGC 60450 Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285 | |||||| || || | | ||| || |||| | | || Sbjct 60449 ACGGAAAGT-GT--------TCGCAGCATCACCAT------------CTTCGAAAAGAGT 60411 Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345 ||||| || || ||||||||||| ||||||||||| || ||||| || || || || || Sbjct 60410 GTTCTCTACAGTCGCACCATGAATAGCACATAGTAAGGCACCACCAAGGATACCAGCTAC 60351 Query 123346 ACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATA 123405 ||||||||||| ||||| || | || ||||||||||||||||| ||| | | | Sbjct 60350 GCCCATCATGTGGAATGGGTTAAGAGTCCAGTTGTGGAAACCTTGTAGGAAAAGAAGGAA 60291 Query 123406 ACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCT-GACCTAGTG 123464 ||| || ||||| || ||||| || |||||| ||||||||||| |||| |||||| | Sbjct 60290 ACGGAAAATTGCCGCTACACCAAAACTTGGTGCAAAGAACCAACT-TGCTTGACCTAAAG 60232 Query 123465 GATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGT 123524 | || | || || | || ||| || ||||| | ||||||| |||| |||||||| Sbjct 60231 GGTAAACTAGGAAAACTGTAACGAATACGGCGATTGGACCAGAGAAAGCGATTGCGTTGT 60172 Query 123525 AAGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTC 123584 |||| | ||| ||||| | | ||||||||||| ||||| || |||||| || | | Sbjct 60171 AAGGACGAATACCTACTAAACGAGCGATCTCAAACTGTCTAAGACAGAAACCAATTACAC 60112 Query 123585 CAAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGA 123644 |||| || |||| ||| | ||| ||| ||||| || | ||| ||||||||| || Sbjct 60111 CAAACGAACCGTGTAGTGCAATAAAAGCCCAAAGACCACCAATTTGGAACCAACGAGTGA 60052 Query 123645 ATGATCCTTGTGCTTCAGGTCCCCA---AAGGAACA-TGAGACTATGACCCATTGCGTCA 123700 |||||||||||||||||||| ||| | | |||| |||||||| || | Sbjct 60051 TGTCACCTTGTGCTTCAGGTCCCCAGATAAGTAGTAGTGAG----TGACCCATACTGTTA 59996 Query 123701 CCAGGTGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATA 123760 |||| || || || || || |||| |||||| ||| || || | ||| ||| | | Sbjct 59995 GCAGGAGTAGATACAGCAGCAGTTAGGAAGTTACATCCTTCTAGGAACGAACTTGCTAGA 59936 Query 123761 CCATGTGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGA 123820 || || || ||||| ||||| ||||| ||| | || | ||||||||| | | ||| Sbjct 59935 CCGTGAGTGTACCAAGATGTTACGAAAGTAATACCAGTTAGCCAACCACCTACAGCTAGG 59876 Query 123821 TACGCACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTT 123880 | ||||| || | || | ||| ||||||||||| | ||| || ||||| || | |||| Sbjct 59875 AATGCACATGGGAATAGAAGAAGTCCAGACCATCCAACGAAAACGAAACGGTCACGCTTT 59816 Query 123881 AACCAGTCGTCAAGAACATCAAA 123903 | |||||| |||| || ||| || Sbjct 59815 AGCCAGTCATCAATAAGATCGAA 59793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578973705718240