Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= NC_020855.1 Length=192497 Score E Sequences producing significant alignments: (Bits) Value seq3345 645 4e-180 >seq3345 Length=67807 Score = 645 bits (714), Expect = 4e-180 Identities = 744/999 (74%), Gaps = 6/999 (1%) Strand=Plus/Plus Query 7851 AGGTGCAGTAAGTAAAGCAACTTCGGAAGTCTCAGCAGATGCTAAGTCTAATGGGAAGTT 7910 || || || || || ||||||| || |||| ||| |||| |||| |||||||| Sbjct 45394 AGCTGGAGCAACTAGAGCAACTGGTAGAGACTCACCAGCAGCTAGATCTAGAGGGAAGTT 45453 Query 7911 GTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTTGCTCTGTTTAATACGTCACC 7970 ||| || || | || ||||||||||||||||||| ||||| | ||| | | |||| | Sbjct 45454 GTGAGCGTTACGCTCGTGCATAACTTCCATACCTAGGTTTGAACGGTTAAGAATGTCAGC 45513 Query 7971 CCATGTAGGAATGATTTTACCATTAACATCAACAACTGATTGGTTAAAGTTAAATCCGTT 8030 ||| || || | ||| | ||| |||||||| ||||| ||||| || ||||| Sbjct 45514 CCAAGTGTTGATTACACGACCTTGTGAATCTACAACTGACTGGTTGAAGTTGAAACCGTT 45573 Query 8031 AAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTAACCAAACACATACAACTGGGAA 8090 ||||| |||||||| || | ||||||||| |||||||| | || || ||||| | Sbjct 45574 TAGGTTGAATGCCATAGTAGCTACACCCATAGATGTTAACCAGATACCAACTACTGGCCA 45633 Query 8091 TGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGTTAAACGATGCATACTGGAAGATTAA 8150 | | | |||| ||||||||| | |||||| || || || || ||||||| || Sbjct 45634 AGCACCTAGGACGAAGTGAAGTGCACGTGAGTTGTTGAATGAAGCGTATTGGAAGAATAG 45693 Query 8151 TCTACCAAAGTATCCATGAGCAGCAACAATATTATAGGTCTCTTCTTCTTGACCAAACTT 8210 | ||| ||||| || ||||| ||||| || || || ||||||||||||||||| ||||| Sbjct 45694 ACGACCTAAGTAACCGTGAGCTGCAACGATGTTGTAAGTCTCTTCTTCTTGACCGAACTT 45753 Query 8211 ATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTCTGATTAGAGAAGATGTAACTAA 8270 ||||| ||||| ||| || | ||||| || || | ||||||||| || || |||| Sbjct 45754 GTAACCGTAGTTAGCAGATTCGTTCTCAGTAGTTTCACGGATTAGAGATGAAGTTACTAG 45813 Query 8271 AGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACATACCTGCTACCCCTGCCATATG 8330 ||||||||||||||| ||| || || |||||||| | ||| || || || ||| || Sbjct 45814 AGAACCGTGCATAGCTGAGAATAGAGAACCACCGAATACACCAGCAACACCAAGCATGTG 45873 Query 8331 GAAAGGATGCATAAGAATGTTATGCTCTGCTTGGAATACGAACATGAAGTTAAACGTACC 8390 ||| || |||||||| ||||| ||||| ||||||||||| | ||||||||| || ||||| Sbjct 45874 GAATGGGTGCATAAGGATGTTGTGCTCAGCTTGGAATACAAGCATGAAGTTGAAAGTACC 45933 Query 8391 AGAAATACCTAGAGGCATTCCATCAGAGAATGAACCCTGACCAAATGGATATACTAAGAA 8450 ||| |||||||||||||| ||||| ||||| ||||| ||||| | ||| || | || ||| Sbjct 45934 AGAGATACCTAGAGGCATACCATCTGAGAAAGAACCTTGACCGATTGGGTAGATTACGAA 45993 Query 8451 CACTGCGAAAGCAGCAGATACTGGAGCACTATATGCTACACAGATCCATGGTCTCATACC 8510 ||||| | || |||| ||||||||| | || |||||||||||||| | |||||| Sbjct 45994 TACTGCAGATGCTGCAGCTACTGGAGCTGAGAAAGCAACACAGATCCATGGACGCATACC 46053 Query 8511 TAAGCGGTATGATAACTCCCACTGTCTACCCATGTAAGCAGAAATTCCAATAAGGAAGTG 8570 || ||||| || | |||||||| | ||| ||||||||| | | ||||| | |||||| Sbjct 46054 TAGACGGTAAGAAAGCTCCCACTCACGACCGATGTAAGCACATACACCAATGAAGAAGTG 46113 Query 8571 GAAGATAACCAACTGATATGGACCTCCGTTATACAACCACTCATCTAATGTGGCAGCTTC 8630 ||| | ||| | || || | ||| ||||| || | ||||||||| | || |||||||| Sbjct 46114 GAAAACAACTAGTTGGTAAGTACCACCGTTGTATAGCCACTCATCGATTGAAGCAGCTTC 46173 Query 8631 CCAAATGGGATAGAAGTGTAATCCAATAGCGTTGGAAGATGGAACGACAGCACCAGAGAT 8690 ||| || || |||||||| | || |||||||| ||| |||||| |||||||||||||| Sbjct 46174 CCAGATTGGGTAGAAGTGAACACCGATAGCGTTTGAACTTGGAACTACAGCACCAGAGAT 46233 Query 8691 GATGTTGTTTCCATACATGAATGAACCTGCAACAGGTTCACGAATACCGTCGATATCGAC 8750 |||||||||||| || | | ||||| ||||| || ||||| ||||| |||||||| || Sbjct 46234 GATGTTGTTTCCGTAAAGTAGAGAACCAGCAACTGGCTCACGGATACCATCGATATCTAC 46293 Query 8751 AGGTGGAGCAGCAATAAATGCCACGATAAAGCAAGTAGCAGCAGC--TAACAAG-CAAGG 8807 || || || || ||||| | | |||| | ||| | | ||| ||| || ||| Sbjct 46294 TGGAGGTGCTGCGATAAAAG---CAATAACGTAAGCTGAAATAGCTGTAAGTAGAGTAGG 46350 Query 8808 AATCATTAGAACTCCAAACCAACCGACATAAAGTCTGTT 8846 | ||||||| || |||||||| | || |||||||| Sbjct 46351 GAACATTAGACAACCGAACCAACCAATGTATAGTCTGTT 46389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615836133468640