Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= NC_020874.1 Length=46198 Score E Sequences producing significant alignments: (Bits) Value seq3345 535 1e-147 >seq3345 Length=67807 Score = 535 bits (592), Expect = 1e-147 Identities = 717/992 (72%), Gaps = 4/992 (0%) Strand=Plus/Plus Query 25849 TAGTGCAACTTGTGTTGACTCAGATGATGCTAAGTCAAGTGGAAAGTTATGAGCATTACG 25908 ||| |||||| || |||||| | |||| || || || ||||| ||||| ||||| Sbjct 45406 TAGAGCAACTGGTAGAGACTCACCAGCAGCTAGATCTAGAGGGAAGTTGTGAGCGTTACG 45465 Query 25909 CTCGTGCATAACTTCAAAGCCGAGGTTAGCTCGGTTTAATACATCAGCCCATGTAGGTAT 25968 ||||||||||||||| | || ||||| | ||||| | | |||||||| || || Sbjct 45466 CTCGTGCATAACTTCCATACCTAGGTTTGAACGGTTAAGAATGTCAGCCCAAGTGTTGAT 45525 Query 25969 TATCTTTCCATTAACATCTACTACTGACTGGTTAAAGTTAAAACCATTTAGGTTAAATGC 26028 || || | |||||| ||||||||||| ||||| ||||| |||||||| ||||| Sbjct 45526 TACACGACCTTGTGAATCTACAACTGACTGGTTGAAGTTGAAACCGTTTAGGTTGAATGC 45585 Query 26029 CATTGTGCAGATACCCATAGATGTCAGCCATATGCCAACAACCGGCCAAGTAGCAAGAAA 26088 ||| || | |||||||||||| | ||| || ||||| || ||||||| | | || | Sbjct 45586 CATAGTAGCTACACCCATAGATGTTAACCAGATACCAACTACTGGCCAAGCACCTAGGAC 45645 Query 26089 GAAATGAAGAGAACGGCTGTTATTAAAACTCGCATACTGAAAAATTAATCTCCCAAAGTA 26148 ||| ||||| | ||| ||| || || || || || || | || | || ||||| Sbjct 45646 GAAGTGAAGTGCACGTGAGTTGTTGAATGAAGCGTATTGGAAGAATAGACGACCTAAGTA 45705 Query 26149 CCCGTGTGCAGCGACAATATTATATGTCTCTTCATCTTGCCCAAACTTATAGCCATAATT 26208 ||||| || || || || || || |||||||| ||||| || ||||| || || || || Sbjct 45706 ACCGTGAGCTGCAACGATGTTGTAAGTCTCTTCTTCTTGACCGAACTTGTAACCGTAGTT 45765 Query 26209 CTGTGAGACTTCCTCTGTCGTTTCTGCAATAAGTGAGGAAGTAACCAAACTTCCGTGCAT 26268 || | | ||| || ||||| || || || ||||| || | | |||||||| Sbjct 45766 AGCAGATTCGTTCTCAGTAGTTTCACGGATTAGAGATGAAGTTACTAGAGAACCGTGCAT 45825 Query 26269 AGCAGCGAAAAGAGCTCCACCGAAAACCCCAGCAACACCAGCCATATGGAATGGGTGCAT 26328 ||| | ||| |||| |||||||| || |||||||||||| ||| |||||||||||||| Sbjct 45826 AGCTGAGAATAGAGAACCACCGAATACACCAGCAACACCAAGCATGTGGAATGGGTGCAT 45885 Query 26329 GAGTATATTATGTTCTGCTTGGAATACGAACATAAAGTTAAAAGTACCAGAGATACCAAG 26388 || || || || || ||||||||||| | ||| ||||| ||||||||||||||||| || Sbjct 45886 AAGGATGTTGTGCTCAGCTTGGAATACAAGCATGAAGTTGAAAGTACCAGAGATACCTAG 45945 Query 26389 AGGCATTCCATCACTAAAACTCCCTTGTCCGAAAGGATAAACTAAGAACACTGCGAGA-G 26447 |||||| ||||| ||| ||||| |||| || || | || ||| ||||| ||| | Sbjct 45946 AGGCATACCATCTGAGAAAGAACCTTGACCGATTGGGTAGATTACGAATACTGC-AGATG 46004 Query 26448 CTGCGGATAGTGGTGCTGTATATGCAACAAATATCCATGGTCTCATTCCTAGTCTGTAAG 26507 |||| | || ||| |||| | |||||| | |||||||| | ||| ||||| | ||||| Sbjct 46005 CTGCAGCTACTGGAGCTGAGAAAGCAACACAGATCCATGGACGCATACCTAGACGGTAAG 46064 Query 26508 ATAGTTCCCACTGTCTCCCTGCATATGCTGCTACTCCTATTAAGAAGTGGAAGATAATGA 26567 | || ||||||| | || || || ||| || || ||||||||||| | || | Sbjct 46065 AAAGCTCCCACTCACGACCGATGTAAGCACATACACCAATGAAGAAGTGGAAAACAACTA 46124 Query 26568 GTTGATATGGTCCGCCATTGTATAGCCACTCGTCCAGTGTGCCAGCTTCCCAGATCGGGT 26627 |||| || | || || |||||||||||||| || | || ||||||||||||| |||| Sbjct 46125 GTTGGTAAGTACCACCGTTGTATAGCCACTCATCGATTGAAGCAGCTTCCCAGATTGGGT 46184 Query 26628 AAAAATGTAGTCCGATTGCGTTAGAGGAGGGGACGACTGCTCCTGATATTATATTGTTTC 26687 | || || | ||||| ||||| || || || || || || || || || ||||||| Sbjct 46185 AGAAGTGAACACCGATAGCGTTTGAACTTGGAACTACAGCACCAGAGATGATGTTGTTTC 46244 Query 26688 CGTACATTAACGAGCCGGAAACTGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTG 26747 |||| | || || || | |||||||||||| || ||||| |||||||| || ||||||| Sbjct 46245 CGTAAAGTAGAGAACCAGCAACTGGCTCACGGATACCATCGATATCTACTGGAGGTGCTG 46304 Query 26748 CGATGAAGGCAAGTATAAAACATGTAGTGGCTGCGAGTA-AGCAGGGTATCATAAGCACC 26806 |||| || |||| | || || | | |||| |||| || |||| | ||| || Sbjct 46305 CGATAAAAGCAATAACGTAAGCTGAAATAGCTGTAAGTAGAGTAGGG-AACATTAGACAA 46363 Query 26807 CCGAACCATCCCACATAGAGACGGTTCTCAGT 26838 |||||||| || | || || | ||||||||| Sbjct 46364 CCGAACCAACCAATGTATAGTCTGTTCTCAGT 46395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147706015079040