Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq3345 850 0.0 >seq3345 Length=67807 Score = 850 bits (942), Expect = 0.0 Identities = 802/1020 (79%), Gaps = 2/1020 (0%) Strand=Plus/Minus Query 154960 TGGGACGAACTCTGCCAGTGGGTAACTTCTGCTGACAACCGCATCTATGTCGGTTGGTTC 155019 ||||| || ||||| ||| | ||||| |||| ||| | | || | ||||||||| Sbjct 46425 TGGGAGCAATTCTGCGCATGGATCACTTCAACTGAGAACAGACTATACATTGGTTGGTTC 46366 Query 155020 GGTGTTCTTATGATCCCTTGCCTCCTCGCTGCTGCTACATGCTT-CATTGTCGCCTTCAT 155078 ||| ||| ||| ||||| || || | ||| | || |||| | || | || || || Sbjct 46365 GGTTGTCTAATGTTCCCTACTCTACTTACAGCTATTTCA-GCTTACGTTATTGCTTTTAT 46307 Query 155079 TGCTGCACCTCCTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCTTTAATGTA 155138 || |||||||| ||||| || |||||||| ||||| || || ||||||||| || | || Sbjct 46306 CGCAGCACCTCCAGTAGATATCGATGGTATCCGTGAGCCAGTTGCTGGTTCTCTACTTTA 46247 Query 155139 TGGTAACAACATCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGTCTCCACTT 155198 || ||||||||||||||||||||||| || || ||||||||||| || ||| | ||||| Sbjct 46246 CGGAAACAACATCATCTCTGGTGCTGTAGTTCCAAGTTCAAACGCTATCGGTGTTCACTT 46187 Query 155199 CTATCCTATTTGGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGTCCTTTCCA 155258 ||| || || |||||||| || | | ||||||||| | ||||| |||||| ||| ||| Sbjct 46186 CTACCCAATCTGGGAAGCTGCTTCAATCGATGAGTGGCTATACAACGGTGGTACTTACCA 46127 Query 155259 ACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGTGGTCGTCAGTGGGAACT 155318 ||| || || ||||||||| | || || | || ||| |||||| ||||||| || Sbjct 46126 ACTAGTTGTTTTCCACTTCTTCATTGGTGTATGTGCTTACATCGGTCGTGAGTGGGAGCT 46067 Query 155319 TTCTTACCGTCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGC 155378 |||||||||||| || |||||||| |||||||||||||| | ||| || |||||| |||| Sbjct 46066 TTCTTACCGTCTAGGTATGCGTCCATGGATCTGTGTTGCTTTCTCAGCTCCAGTAGCTGC 46007 Query 155379 TGCGTTCGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCGATGCC 155438 || | || |||||| | | || || ||||||||||||||||||| |||| ||||| Sbjct 46006 AGCATCTGCAGTATTCGTAATCTACCCAATCGGTCAAGGTTCTTTCTCAGATGGTATGCC 45947 Query 155439 TCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTGTTCCAAGCAGAACACAATATCCT 155498 ||| ||||||||||||||||| |||| ||| | || |||||||| || ||||| ||||| Sbjct 45946 TCTAGGTATCTCTGGTACTTTCAACTTCATGCTTGTATTCCAAGCTGAGCACAACATCCT 45887 Query 155499 TATGCACCCCTTCCACATGCTTGGAGTAGCAGGTGTGTTCGGTGGATCTCTTTTCTCTGC 155558 ||||||||| |||||||||||||| || || ||||| |||||||| ||||| ||||| || Sbjct 45886 TATGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCTCTATTCTCAGC 45827 Query 155559 TATGCACGGTTCATTGGTGACATCTTCACTAATCCGTGAAACTACTGAGCAAGAGTCTCA 155618 |||||||||||| | || || || || ||||||||||||||||||||| | || ||| Sbjct 45826 TATGCACGGTTCTCTAGTAACTTCATCTCTAATCCGTGAAACTACTGAGAACGAATCTGC 45767 Query 155619 GAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACTTATAACATTGTTGCTGCTCATGG 155678 ||||| |||||||||||||| ||||||||||| ||||| ||||| ||||| ||||| || Sbjct 45766 TAACTACGGTTACAAGTTCGGTCAAGAAGAAGAGACTTACAACATCGTTGCAGCTCACGG 45707 Query 155679 ATACTTCGGTCGTCTTATCTTCCAGTATGCATCCTTCAACAACTCAAGAAGTCTTCACTT 155738 ||||| |||||||| ||||||| || || || |||||||||||| | |||||||| Sbjct 45706 TTACTTAGGTCGTCTATTCTTCCAATACGCTTCATTCAACAACTCACGTGCACTTCACTT 45647 Query 155739 CTTCCTTGCTGCATGGCCTGTGGTCTGCATCTGGGCAACTGCTATGGGTGTGTCAACGAT 155798 | |||| | ||| ||||| || || | |||||| ||| |||||||||| | || || Sbjct 45646 CGTCCTAGGTGCTTGGCCAGTAGTTGGTATCTGGTTAACATCTATGGGTGTAGCTACTAT 45587 Query 155799 GGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTAGTAGACGCTAGTGGTAAAGT 155858 |||||||||||| ||||||||||||||||||||||| || ||||| | ||| || Sbjct 45586 GGCATTCAACCTAAACGGTTTCAACTTCAACCAGTCAGTTGTAGATTCACAAGGTCGTGT 45527 Query 155859 CATCCCTACATGGGCAGACATTCTTAACCGCGCTGGTCTTGGTATGGAAGTAATGCACGA 155918 ||| || ||||| |||||||||||||| | || ||||||||||| |||||||| Sbjct 45526 AATCAACACTTGGGCTGACATTCTTAACCGTTCAAACCTAGGTATGGAAGTTATGCACGA 45467 Query 155919 GCGTAACGCTCACAACTTCCCTCTTGACCTTGCTGCTGCTGAGTCAGTGCCTGTTGCACT 155978 |||||||||||||||||||||||| || || ||||||| |||||| | || ||||| || Sbjct 45466 GCGTAACGCTCACAACTTCCCTCTAGATCTAGCTGCTGGTGAGTCTCTACCAGTTGCTCT 45407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584810256778720