Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2905 771 0.0 >seq2905 Length=20909 Score = 771 bits (854), Expect = 0.0 Identities = 1362/1970 (69%), Gaps = 49/1970 (2%) Strand=Plus/Minus Query 353661 GTATCCAGCCTTTTCTACCTCTTCATCTGTATATACTTC-TTGTCCTTGT-GTGCGTCGC 353718 ||| || ||||| || ||||| || || || | || || ||| | || | | || | || Sbjct 8812 GTAGCCGGCCTTCTCGACCTCCTCGTCGGTCCAGACCTCCTTGCCGTTCTTGCGCATGGC 8753 Query 353719 ATAGCAACCTGTTTCTTAATCTTCTTTAGTTCCGATTTTGGGATTTTGACAGCCACCTTC 353778 || || | ||||| |||||||| || || | || ||||| || || ||| ||||| Sbjct 8752 C--GCGACTTCCTTCTTGATCTTCTTGAGCTCGGCCTTGGGGATCTTCACCGCCGCCTTC 8695 Query 353779 TTAACTACAATTTGGTTTCCGAACGCGTCGAACTTCTCCTCATCATATAGATTCTTGTTT 353838 || | | || | ||| ||||| ||||||||||| ||||| | | ||| | || Sbjct 8694 TTCTCCTCGATCTTGTTGCCGAAGGCGTCGAACTTGTCCTCCT--TGCCGAT-CATGGCG 8638 Query 353839 TTCTTACA---CTCCTTCTCTTCACGTTTGCGTGCCTTTTCTGCTGCGTCCATCCATTCG 353895 |||| ||||||||| | ||||| ||||| || || || |||||||| ||| Sbjct 8637 GTCTTGGCGGCCTCCTTCTCGGCCTTCTTGCGCGCCTTCTCGGCAGCCTCCATCCAGTCG 8578 Query 353896 GCACCACTCACAGTGCAGCGACCATCCACAACCGACCATACTTCGGGGCAGAGTGCAGAA 353955 | || || |||||||| || || || || ||||| || || ||||| || || Sbjct 8577 CCGCCGGAGACGGTGCAGCGGCCGTCGACGACTGACCAGACCTCAGGGCACAGGGCGCTG 8518 Query 353956 TAGAATTCCCGCTGATGAGATATAATAATCACACCCCCAAGATAGCTCTTAATTGCTGTG 354015 || || || ||||| || || || || || || || | || | ||| || || ||| Sbjct 8517 TAAAACTCGCGCTGGTGGCTAATGATGATGACGCCGCCCTGGTACCGCTTGATGGCGGTG 8458 Query 354016 GCGAGAGCACCAAGCGAGTCACGGTCGAGGAAATTAGTAGGTTCGTCAAGGATAAGAACG 354075 ||||| || || |||||||| ||||||||||| || || || || || ||||| || Sbjct 8457 GCGAGCGCGCCGAGCGAGTCGCGGTCGAGGAAGTTGGTGGGCTCATCGAGGATGGTCACA 8398 Query 354076 TGCGGCTCCATCCACATTGCTGCAGCCAGAACTACCTTAACCTTCTGTCCGCCTGATAGT 354135 ||||||||||||||||| ||| || || || ||||| |||||||| ||||| || || Sbjct 8397 TGCGGCTCCATCCACATGCATGCGGCGAGCACGACCTTGACCTTCTGGCCGCCCGAGAGC 8338 Query 354136 GCGTGAATCTTGGAATATGTACCGAACTGCGATTCAAGGTTGAAATGGTCGAGATGTTTC 354195 || |||||||| || || |||||||||| || |||||||| | |||||| || ||| Sbjct 8337 GCCGAGATCTTGGAGTACGTGCCGAACTGCGTCTCGAGGTTGAAGTTGTCGAGGTGCTTC 8278 Query 354196 TGTACGTTAAGTGTTGAAAGTTTCTTATTGGCAATACCTGACGATTCAAATGCAATACGT 354255 || | ||| || | || ||||| ||||||| || |||| || || || || || Sbjct 8277 TGGATGTTGAGCTGCGTGAGCTTCTTGGTGGCAATGCCCGACGCCTCGAAGGCGATGCGC 8218 Query 354256 TCATCGACCTGCATAATAAGTTTCTCCAT-----TGCCGAACCCAGATTATATTCGGTCT 354310 || ||||||||||| || || ||| || ||||| || | | | |||| | Sbjct 8217 TCGTCGACCTGCATCATGAGCTTCATCAGGGCGGTGCCGCACTCGTA----AATCGGCCG 8162 Query 354311 TCTTCTTATCTGCCTGGTCGATCCAGGTCATCTTCATAAGCGTATCTTTATACATCCAGG 354370 ||||||||| ||| |||| ||| || || |||| || || ||| | Sbjct 8161 -CTTCTTATCGTAAGTGTCCGTCCACTGCATGCGCAGCAGGTTATCCTTGGCCACCCACG 8103 Query 354371 TTGTTTCGGTGA-GCGCATCCGCTGCATCCTGACCGAAGTACACAACCTCATACTCGTTT 354429 | || || | | || | ||| || ||||||| |||||| ||||||| Sbjct 8102 AGTTCTCCTCGATGGGGTTCTG--GCAGCC-----GAAGTACTGAACCTCGTACTCGTAG 8050 Query 354430 CCCTTCTTACCCTTACGGCGTCCGCGTAGGGCTTGA-ACCTGACCCACCTTTTTGTCTAT 354488 |||||||| ||||| || || || | | | | || |||||||| ||||| | Sbjct 8049 CCCTTCTTGCCCTTGCGACGGCC-CATGAGTTTCGAGACCTGACCGGGGAACTTGTCGGT 7991 Query 354489 TAGAAGGTCCTCTTCTTCTGTGAGTTCAAGATAGTTCTTTGCAGCGCCCTCGCGGTCCAT 354548 || ||||| || || |||| || || ||||||| || ||| ||||||||||| Sbjct 7990 GAGCTTCTCCTCGTCCTCGTTGAGCTCGAGGAAGTTCTTCGCCTGGCCTTCGCGGTCCAT 7931 Query 354549 GCCTCCTTGGAAACGCCACGCAATGTATTCTGTTGGTGTCAGTTCAACATGGTTCTCAAT 354608 ||| || |||||||||| | | ||| | || | || || | ||||||||||| Sbjct 7930 GCCGCCCGAGAAACGCCACTCGAGGTAGTTGACGGGCGAGAGGTCCAGGTGGTTCTCAAT 7871 Query 354609 ATGATGAAATGCGTGCTGTGCGACATAAGCGAGACGCATATTAGGATGTTTCACGA---- 354664 || || || |||||||| || || || ||||| ||||| || || || || |||| Sbjct 7870 GTGGTGGAACGCGTGCTGCGCCACGTAGGCGAGGCGCATGTTCGGGTGCTTGACGATCAG 7811 Query 354665 -CCTTTGCGGCTCCCTCTTCGTTGGGTTCAATTTCACCAACCATCAACTTAATCATTGTA 354723 |||| || ||| | | |||||| || || || || | | || ||||||||| || Sbjct 7810 GCCTTGGCC-CTCGCCCAG-GTTGGGCTCGATCTCGCCGATGAGCAGCTTAATCATCGTC 7753 Query 354724 GACTTTCCAGCACCATTAACACCTATTACTGCGATACGGGACGCCATAGAGACCTGAACC 354783 ||||| || || || || || || || || || | || || ||||| |||||||| | | Sbjct 7752 GACTTGCCGGCGCCGTTGACGCCGATGACGGCCACGCGCGAGGCCATCGAGACCTGGATC 7693 Query 354784 GAAATGTTATTGAGTGTATTCGTCTCGCGAGATGGATATTTGAATGATACATCGGACATC 354843 || ||||| ||| || ||| ||||| | || || ||||| || | |||| |||| Sbjct 7692 GAGATGTTGAAGAGCGTGTTCACATCGCGCGTCGGGTACTTGAAGGAAGCGTCGGTCATC 7633 Query 354844 TTGATGAGCGCCTTTGTGCGTGATGTAACACCCTCTAGCATTCCTGGTTCAGGGAATGAG 354903 || ||||| ||||| ||||| || || || ||||| ||||| || || |||||||| ||| Sbjct 7632 TTCATGAGGGCCTTGGTGCGCGAGGTGACGCCCTCGAGCATGCCAGGGTCAGGGAAGGAG 7573 Query 354904 AATGCAATACTATCACTCTCTAGTTTGTAGTATGCGGCTGCCTCAGGCACAAGTTTCACA 354963 || || | | ||| ||| || | |||||| || ||||| ||||| || || || Sbjct 7572 AAGGCGACGTTCTCAGACTCGAGCTCGTAGTAGGCCTTGGCCTCGGGCACGAGCTTGACG 7513 Query 354964 AATTCGGATAGGTTTCCCTTATATACTTTGAGTTTGCGGTTCTTCTCATAATGAACGATG 355023 || ||||| ||||| ||||| || || ||||| || ||||||||||| || || ||| Sbjct 7512 AACTCGGAAAGGTTGCCCTTGTACACCTTGAGCTTTCGGTTCTTCTCGTAGTGGCACATG 7453 Query 355024 TCCTGTGCTACATTATCAAGGAAAACAGAGTCGTGCGATACGATCATAGACGATATCTCT 355083 ||||| || || || || ||||| || | ||||||||| |||||||| |||| |||| Sbjct 7452 TCCTGCGCCACGTTGTCGAGGAAGACGGTGTCGTGCGACACGATCATCGACGTGATCTTC 7393 Query 355084 TTGTTACTAAGTTCTTGTACGTATTTCGTTAGCCACGCAACGCCATGAACGTCCACGTGA 355143 |||| || | || | ||| || || |||||||| ||||| || ||||| ||||| Sbjct 7392 TTGTCCGACAGGCCCTGGATGTACTTGGTGAGCCACGCGACGCCGTGCACGTCGACGTGG 7333 Query 355144 TTAGTCGGTTCGTCTAGTAATAGCAGTTCAGGGTCTTTAAGCATAGCACGTGAAAGTGCT 355203 || ||||| || || || | ||||| || || || || ||||| || || || || || Sbjct 7332 TTGGTCGGCTCATCGAGGAGAAGCAGCTCGGGCTCCTTGAGCATGGCGCGCGAGAGGGCG 7273 Query 355204 AATCGCATACGCCAGCCACCCGAAAGTGAACCAACTGGACCAAATATAAGCTCATCGCTG 355263 | ||||| |||||||| || || || || || || || || || || |||| || | Sbjct 7272 AGGCGCATGCGCCAGCCGCCGGAGAGCGAGCCGACCGGGCCGAAGATCAGCTTGTCCTCG 7213 Query 355264 AATGTGCACGACCTCATCATATCAATTACTTGCTCCTTTGTCTTCCC--------CATTT 355315 || |||||||| | |||||| ||||| || | ||||| ||||| || | || Sbjct 7212 AACGTGCACGAGCGCATCATCTCAATGACCTCGTCCTTGGTCTTGCCCGCGCCGTCGTTC 7153 Query 355316 CCCG----GATAAGTGGATCCGAATAAATGAATTCCCAACAGATATATTCGGCATCGGTT 355371 || ||| | || ||| | ||||| ||||| ||||| | || || ||||| Sbjct 7152 ATCGATTTGATCATCGGGTCCTCGTGGATGAACTCCCAGCAGATGCAGTCCGCGTCGGTG 7093 Query 355372 GGTGAAACATCACATTCAACATATACCGACCTGATTTCTTTTGGGAAACCCTCTACTACG 355431 | || || || || || || || ||||| | ||| || || ||||| ||||| || | Sbjct 7092 GCCGACACGTCGCACTCGACGTACACCGATCGGATCTCCTTGGGGAAGCCCTCGACGAGA 7033 Query 355432 CCCGCCGCAATCGACCGCATAAGTGTAGATTTTCCAGCACCATTAGGACCAATTAGACCA 355491 |||| || | ||| ||||| || || || || || ||||| || || ||||| || || Sbjct 7032 TCCGCGGCGACCGAGCGCATGAGCGTCGACTTGCCCGCACCGTTGGGGCCAATGAGGCCG 6973 Query 355492 TAGCACTTGCCTCTCTTCAGTTTTAGTTTTGTATTATGCAGTAGCACACGATTACCATAC 355551 ||||||||||| | ||| || || || || || || ||||| |||||||| || || || Sbjct 6972 TAGCACTTGCCGCGCTTGAGCTTGAGCTTGGTGTTGTGCAGCAGCACACGGTTGCCGTAG 6913 Query 355552 GCAAGCGAAAAAGTGCAATCACATAGAACAGCGAGGTCGTCGTGGTCATC 355601 || ||||| || | ||| || || || || ||||||| |||||||| || Sbjct 6912 GCGAGCGAGAAGGAGCAGTCGCACAGCACCTCGAGGTCATCGTGGTCCTC 6863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471753257653844