Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq3345 893 0.0 >seq3345 Length=67807 Score = 893 bits (990), Expect = 0.0 Identities = 807/1009 (80%), Gaps = 8/1009 (1%) Strand=Plus/Minus Query 150829 CTGGGACAACTTTTGTGACTGGGTTACCTCTACTAACAACCGTCTGTATGTCGGTTGGTT 150888 |||||| | || || | ||| | || || ||| | ||| | || || | |||||||| Sbjct 46426 CTGGGAGCAATTCTGCGCATGGATCACTTCAACTGAGAACAGACTATACATTGGTTGGTT 46367 Query 150889 CGGTGTGCTGATGATTCCAACTCTGTTGGCAGCAACCATTT--GCTT-CATCGTGGCATT 150945 |||| || ||| | || ||||| | |||| | ||| |||| | | | || || Sbjct 46366 CGGTTGTCTAATGTTCCCTACTCTACTTACAGCTA---TTTCAGCTTACGTTATTGCTTT 46310 Query 150946 CATCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAACCCGTTGCTGGTTCTCTGAT 151005 ||||| || || || || || |||||||| |||||||| || |||||||||||||| | Sbjct 46309 TATCGCAGCACCTCCAGTAGATATCGATGGTATCCGTGAGCCAGTTGCTGGTTCTCTACT 46250 Query 151006 GTACGGTAACAACATCATCTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATCGGTCTGCA 151065 ||||| ||||||||||||||||||||||| ||||| ||| |||||||||||| | || Sbjct 46249 TTACGGAAACAACATCATCTCTGGTGCTGTAGTTCCAAGTTCAAACGCTATCGGTGTTCA 46190 Query 151066 CTTCTATCCCATCTGGGAAGCAGCCTCTCTCGATGAATGGCTCTACAACGGTGGTCCTTT 151125 |||||| || ||||||||||| || || ||||||| ||||| |||||||||||| ||| Sbjct 46189 CTTCTACCCAATCTGGGAAGCTGCTTCAATCGATGAGTGGCTATACAACGGTGGTACTTA 46130 Query 151126 CCAACTCGTTGTCTTCCACTTCCTGATTGGTATCTATGCTTACATGGGTCGTGAGTGGGA 151185 |||||| ||||| ||||||||| | |||||| | | ||||||||| |||||||||||||| Sbjct 46129 CCAACTAGTTGTTTTCCACTTCTTCATTGGTGTATGTGCTTACATCGGTCGTGAGTGGGA 46070 Query 151186 ACTGTCTTACCGCTTGGGTATGCGTCCCTGGATCTGCGTTGCATACTCTGCTCCAGTTGC 151245 || |||||||| | ||||||||||| |||||||| ||||| | ||| |||||||| || Sbjct 46069 GCTTTCTTACCGTCTAGGTATGCGTCCATGGATCTGTGTTGCTTTCTCAGCTCCAGTAGC 46010 Query 151246 TGCTGCGAGTGCAGTGTTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAAT 151305 ||| || |||||| ||| | |||| || ||||||||||||||||||| |||| || Sbjct 46009 TGCAGCATCTGCAGTATTCGTAATCTACCCAATCGGTCAAGGTTCTTTCTCAGATGGTAT 45950 Query 151306 GCCCCTGGGTATTTCTGGCACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACAT 151365 ||| || ||||| ||||| || ||||||| ||||||||| |||||||| ||||||||||| Sbjct 45949 GCCTCTAGGTATCTCTGGTACTTTCAACTTCATGCTTGTATTCCAAGCTGAGCACAACAT 45890 Query 151366 TCTGATGCACCCCTTCCATATGCTTGGTGTGGCTGGTGTCTTCGGTGGATCGCTCTTCTC 151425 || |||||||| ||||| ||||||||||| |||||||| |||||||| || || ||||| Sbjct 45889 CCTTATGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCTCTATTCTC 45830 Query 151426 GGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAACGAGTC 151485 || |||||||||||||| || ||||| || || | ||||| || || || ||||| || Sbjct 45829 AGCTATGCACGGTTCTCTAGTAACTTCATCTCTAATCCGTGAAACTACTGAGAACGAATC 45770 Query 151486 CCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCACA 151545 ||||| ||||||||||||||||||||||||||||| |||||||||||||| || || Sbjct 45769 TGCTAACTACGGTTACAAGTTCGGTCAAGAAGAAGAGACTTACAACATCGTTGCAGCTCA 45710 Query 151546 CGGTTACTTTGGTCGTCTCATCTTCCAATACGCTTCCTTCAACAATTCCCGTTCGCTGCA 151605 ||||||||| |||||||| |||||||||||||||| |||||||| || ||| | || || Sbjct 45709 CGGTTACTTAGGTCGTCTATTCTTCCAATACGCTTCATTCAACAACTCACGTGCACTTCA 45650 Query 151606 CTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCACTTGGTGTCAGC-A 151664 |||| |||| | || ||||| || || ||||||||||| || | | ||||| ||| | Sbjct 45649 CTTCGTCCTAGGTGCTTGGCCAGTAGTTGGTATCTGGTTAACATCTATGGGTGT-AGCTA 45591 Query 151665 CCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCATGGATGGTCAGGGCA 151724 | |||||||||||||| ||||||||||||||||||||||| | | ||| || || Sbjct 45590 CTATGGCATTCAACCTAAACGGTTTCAACTTCAACCAGTCAGTTGTAGATTCACAAGGTC 45531 Query 151725 AAGTCCTGAACACCTGGGCAGACGTTCTGAACCGTGCAGGTCTGGGTATGGAAGTTATGC 151784 || | ||||| ||||| ||| |||| |||||| || || |||||||||||||||| Sbjct 45530 GTGTAATCAACACTTGGGCTGACATTCTTAACCGTTCAAACCTAGGTATGGAAGTTATGC 45471 Query 151785 ACGAGCGTAATGCTCACAACTTCCCTCTCGACCTTGCTGCTGCTGAGTC 151833 |||||||||| ||||||||||||||||| || || ||||||| |||||| Sbjct 45470 ACGAGCGTAACGCTCACAACTTCCCTCTAGATCTAGCTGCTGGTGAGTC 45422 Score = 619 bits (686), Expect = 1e-172 Identities = 740/1002 (74%), Gaps = 2/1002 (0%) Strand=Plus/Plus Query 152371 GATGACTGGCTTAAGAGAGACCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 152430 ||||||||||| ||| | |||||||||||||| ||||| ||||||||||||||||| || Sbjct 59805 GATGACTGGCTAAAGCGTGACCGTTTCGTTTTCGTTGGATGGTCTGGACTTCTTCTATTC 59864 Query 152431 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTCGCGACGAGTTGG 152490 || ||| | || ||| | || |||||||| ||||| | |||||||| || |||| Sbjct 59865 CCATGTGCATTCCTAGCTGTAGGTGGTTGGCTAACTGGTATTACTTTCGTAACATCTTGG 59924 Query 152491 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAACTTTCTTACTGCGGCAGTT 152550 || |||||||| | |||||||| | || || || ||||| || ||||| || || Sbjct 59925 TACACTCACGGTCTAGCAAGTTCGTTCCTAGAAGGATGTAACTTCCTAACTGCTGCTGTA 59984 Query 152551 TCTACTCCAGCAGATGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCTCAA 152610 |||||||| || | ||||||||| || || || ||| ||||||| ||||| || ||| Sbjct 59985 TCTACTCCTGCTAACAGTATGGGTCACTCACTACTACTTATCTGGGGACCTGAAGCACAA 60044 Query 152611 GGGGATTTCGTCAGATGGATTCAGCTCGGAGGACTCTGGGCTTTTGTGGCGCTCCACGGG 152670 || || || | ||| | || | || || || ||||||||| | || || ||||| Sbjct 60045 GGTGACATCACTCGTTGGTTCCAAATTGGTGGTCTTTGGGCTTTTATTGCACTACACGGT 60104 Query 152671 GCTTTCGCTCTAATCGGTTTCATGCTTCGCCAGTTTGAACTGGCACGTCTCATCGGTATC 152730 | || | | |||| |||||| ||| | |||||||| | || ||| | | ||||| Sbjct 60105 TCGTTTGGTGTAATTGGTTTCTGTCTTAGACAGTTTGAGATCGCTCGTTTAGTAGGTATT 60164 Query 152731 CGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTC 152790 ||||| ||||| || || || ||||||||||| ||||| || || |||| || || || Sbjct 60165 CGTCCTTACAACGCAATCGCTTTCTCTGGTCCAATCGCCGTATTCGTTACAGTTTTCCTA 60224 Query 152791 ATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCGCAGCAATC 152850 | |||||| | |||||| | |||||||| || || ||| ||| || || || ||||| Sbjct 60225 GTTTACCCTTTAGGTCAAGCAAGTTGGTTCTTTGCACCAAGTTTTGGTGTAGCGGCAATT 60284 Query 152851 TTCCGATTCCTTCTCTTCCTTCAAGGATTCCACAACTGGACATTGAATCCGTTTCATATG 152910 ||||| |||||||| ||||| ||||| |||||||||||||| | || || || || ||| Sbjct 60285 TTCCGTTTCCTTCTTTTCCTACAAGGTTTCCACAACTGGACTCTTAACCCATTCCACATG 60344 Query 152911 ATGGGTGTTGCAGGTATTTTGGGAGGGGCCTTGCTTTCTGCCATTCATGGTGTTACAGTA 152970 ||||| || || ||||| | || || ||||| || | ||| |||||||||| || ||| Sbjct 60345 ATGGGCGTAGCTGGTATCCTTGGTGGTGCCTTACTATGTGCTATTCATGGTGCGACTGTA 60404 Query 152971 GAGAATACTTTGTATCAAGATGGTGAACAAGCAAACACTTTCAAAGCTTTCGACAGC-AC 153029 ||||| ||| | | |||||||||| || ||||||||| || ||| || | || Sbjct 60405 GAGAACACTCTTTTCGAAGATGGTGATGCTGCGAACACTTTCCGTGCATTC-ACTCCAAC 60463 Query 153030 TCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCCCAGATATTTGG 153089 ||| ||||||||| || || ||||||||||| |||||||||||||| ||||| ||||| Sbjct 60464 ACAATCAGAAGAGACTTACTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATTTTTGG 60523 Query 153090 AATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTACCTGTTATGGG 153149 |||| || || || || ||| | || ||||| ||||| || ||||| || || Sbjct 60524 TGTTGCATTCTCTAACAAGCGTTGGTTACACTTCTTCATGCTTTTCGTACCAGTAGCTGG 60583 Query 153150 TCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCGTGCTTACGATTT 153209 | | ||||| | | || || || | ||| | || || || || ||||| |||||||| Sbjct 60584 TATGTGGACAAGTGCGATCGGTATTGTAGGTTTAGCACTAAACCTGCGTGCATACGATTT 60643 Query 153210 TGTATCTCAAGAAATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTTCTATACGAAGAA 153269 || || ||||| | || || ||||||| |||||||| || || ||||| ||||| || Sbjct 60644 CGTTTCGCAAGAGCTTAGAGCCGCAGAAGACCCTGAATTCGAAACATTCTACACGAAAAA 60703 Query 153270 TATCCTTTTGAACGAAGGTCTTCGTGCTTGGTTGGCACCTGTTGACCAACCTCATGAGAA 153329 | |||| | || |||||| | ||||| ||| |||| | || ||||||||||| || Sbjct 60704 CAACCTTCTAAATGAAGGTATCCGTGCGTGGATGGCTGCACAAGATCAACCTCATGAAAA 60763 Query 153330 CTTCGTGTTCCCTGAAGAGGTATTGCCACGAGGCAACGCTCT 153371 |||| | |||||||| |||||| | ||||| || ||||| || Sbjct 60764 CTTCATCTTCCCTGAGGAGGTACTACCACGTGGAAACGCCCT 60805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549598958604640