Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= NC_021559.1 Length=179063 Score E Sequences producing significant alignments: (Bits) Value seq3345 765 0.0 >seq3345 Length=67807 Score = 765 bits (848), Expect = 0.0 Identities = 785/1020 (77%), Gaps = 8/1020 (1%) Strand=Plus/Minus Query 72226 TGGGACGAGTTTTGTGAGTGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTT 72285 ||||| | || || | ||| | || || ||||| || | | ||| |||||||||| Sbjct 46425 TGGGAGCAATTCTGCGCATGGATCACTTCAACTGAGAACAGACTATACATTGGTTGGTTC 46366 Query 72286 GGT-GTCTTAATGATCCCATGTCTTCTAACTGCTGCTGCTTGTTTCATTGTAGCATTCAT 72344 ||| |||| |||| |||| ||| || || ||| | | || | || | || || || Sbjct 46365 GGTTGTCT-AATGTTCCCTACTCTACTTACAGCTATTTCAGCTTACGTTATTGCTTTTAT 46307 Query 72345 CGCTGCTCCTCCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATA 72404 ||| || |||||||| |||||||| || ||| | || |||||||| |||||| | | || Sbjct 46306 CGCAGCACCTCCAGTAGATATCGATGGTATCCGTGAGCCAGTTGCTGGTTCTCTACTTTA 46247 Query 72405 TGGTAACAACATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTT 72464 || |||||||||||||||||||||||||||||| ||||||||| || || | ||||| Sbjct 46246 CGGAAACAACATCATCTCTGGTGCTGTAGTTCCAAGTTCAAACGCTATCGGTGTTCACTT 46187 Query 72465 CTATCCCATCTGGGAAGCAGCCACTATGGACGAGTGGTTGTATAACGGAGGTCCTTACCA 72524 ||| || ||||||||||| || | || || |||||| | || ||||| ||| ||||||| Sbjct 46186 CTACCCAATCTGGGAAGCTGCTTCAATCGATGAGTGGCTATACAACGGTGGTACTTACCA 46127 Query 72525 GTTAGTTATTTTCCACTTCCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGAACT 72584 ||||| ||||||||||| | ||||| | | ||| ||||| ||| | ||||||| || Sbjct 46126 ACTAGTTGTTTTCCACTTCTTCATTGGTGTATGTGCTTACATCGGTCGTGAGTGGGAGCT 46067 Query 72585 ATCATACAGACTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCTGC 72644 || ||| | ||||| ||| | || ||||| ||||| || | |||||| || ||| |||| Sbjct 46066 TTCTTACCGTCTAGGTATGCGTCCATGGATCTGTGTTGCTTTCTCAGCTCCAGTAGCTGC 46007 Query 72645 AGCATTTGCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCC 72704 ||||| |||||||||| | | || ||| ||||||| ||||| ||||| ||||||||||| Sbjct 46006 AGCATCTGCAGTATTCGTAATCTACCCAATCGGTCAAGGTTCTTTCTCAGATGGTATGCC 45947 Query 72705 ACTAGGTATCTCAGGTACGTTCAACTTCATGTTCGTGTTCCAAGCAGAACACAACATACT 72764 ||||||||||| ||||| |||||||||||| | || |||||||| || |||||||| || Sbjct 45946 TCTAGGTATCTCTGGTACTTTCAACTTCATGCTTGTATTCCAAGCTGAGCACAACATCCT 45887 Query 72765 AATGCACCCCTTCCATATGGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGC 72824 |||||||| ||||| ||| ||||| || ||| | ||||||||| ||| ||| || Sbjct 45886 TATGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCTCTATTCTCAGC 45827 Query 72825 AATGCACGGTTCACTTGTTACTTCATCTCTAATCAGAGAGACAACAGAGAACGAGAGTCA 72884 ||||||||||| || || ||||||||||||||| | || || || |||||||| | Sbjct 45826 TATGCACGGTTCTCTAGTAACTTCATCTCTAATCCGTGAAACTACTGAGAACGAATCTGC 45767 Query 72885 AAACTACGGCTATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGG 72944 |||||||| || |||||||| ||||||||||| || || ||||| ||||| ||||| || Sbjct 45766 TAACTACGGTTACAAGTTCGGTCAAGAAGAAGAGACTTACAACATCGTTGCAGCTCACGG 45707 Query 72945 ATACTTCGGTAGATTAATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTT 73004 ||||| ||| | || ||||||| || || |||||||||||||| ||| || | ||||| Sbjct 45706 TTACTTAGGTCGTCTATTCTTCCAATACGCTTCATTCAACAACTCACGTGCACTTCACTT 45647 Query 73005 CTTCCTCGCTGTATTCCCTGTAGTCTGTGTATGGTTAACCTCAATGGGTATCTGTACAAT 73064 | |||| | || | || ||||| || | |||||||| || |||||| | ||| || Sbjct 45646 CGTCCTAGGTGCTTGGCCAGTAGTTGGTATCTGGTTAACATCTATGGGTGTAGCTACTAT 45587 Query 73065 GGCATTCAACCTTAACGGATTCAACTTCAACCAATCAGTTGTAGATGCAAACGGAAAGAT 73124 |||||||||||| ||||| |||||||||||||| |||||||||||| || | || Sbjct 45586 GGCATTCAACCTAAACGGTTTCAACTTCAACCAGTCAGTTGTAGATTCACAAGG---TCG 45530 Query 73125 TGT-ACCAACA--TGGGGAGATGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCA 73181 ||| | ||||| |||| || |||||||| | ||||||| || |||||||||||||| Sbjct 45529 TGTAATCAACACTTGGGCTGACATTCTTAACCGTTCAAACCTAGGTATGGAAGTTATGCA 45470 Query 73182 TGAAAGAAATGCACACAACTTCCCACTAGACCTAGCATCTGCTGAGTCTACAACAGTTGC 73241 || | || || ||||||||||| ||||| ||||| ||| ||||||| | ||||||| Sbjct 45469 CGAGCGTAACGCTCACAACTTCCCTCTAGATCTAGCTGCTGGTGAGTCTCTACCAGTTGC 45410 Score = 547 bits (606), Expect = 8e-151 Identities = 741/1032 (72%), Gaps = 23/1032 (2%) Strand=Plus/Plus Query 73371 TTCTTGATGATTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGTCTTTTAC 73430 || ||||||| ||| ||||| | || |||||||| ||| | ||||||||||| ||| | | Sbjct 59800 TTATTGATGACTGGCTAAAGCGTGACCGTTTCGTTTTCGTTGGATGGTCTGGACTTCTTC 59859 Query 73431 TTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAGGAACTACTTTCGTGACCT 73490 | || || ||||| | |||||| | || |||||| | || | ||||||||| || | Sbjct 59860 TATTCCCATGTGCATTCCTAGCTGTAGGTGGTTGGCTAACTGGTATTACTTTCGTAACAT 59919 Query 73491 CATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAGCAAATTTTTTAACTGCAG 73550 | |||||||| || ||| | ||| || | || || ||| || || ||||||| | Sbjct 59920 CTTGGTACACTCACGGTCTAGCAAGTTCGTTCCTAGAAGGATGTAACTTCCTAACTGCTG 59979 Query 73551 CAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTCCTTTGGGGACCAGAGG 73610 | ||||| || |||| | | ||||||||| ||| | | | |||||||| || | Sbjct 59980 CTGTATCTACTCCTGCTAACAGTATGGGTCACTCACTACTACTTATCTGGGGACCTGAAG 60039 Query 73611 CACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGGAACTTTGTAGCATTAC 73670 ||||||| || | || ||||| ||| | ||||| || ||| ||| | ||| ||| Sbjct 60040 CACAAGGTGACATCACTCGTTGGTTCCAAATTGGTGGTCTTTGGGCTTTTATTGCACTAC 60099 Query 73671 ATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTGAGATTGCAGGACTTGTTG 73730 | || ||||| | || |||||| ||||||||||||||||| || | | || | Sbjct 60100 ACGGTTCGTTTGGTGTAATTGGTTTCTGTCTTAGACAGTTTGAGATCGCTCGTTTAGTAG 60159 Query 73731 GGATACGTCCTTACAACGCATTAGCTTTTTCAGCAGTTATCGCAGTATTCACGAGCATCT 73790 | || ||||||||||||||| | ||||| || | ||||| |||||| | | | Sbjct 60160 GTATTCGTCCTTACAACGCAATCGCTTTCTCTGGTCCAATCGCCGTATTCGTTACAGTTT 60219 Query 73791 TTCTAATATATCCTTTAGGAC-AGCATAGTTGGTTCTTCGCACCTTCATTCGGTGTCGCA 73849 | ||| | || |||||||| | |||| ||||||||||| ||||| || ||||| || Sbjct 60220 TCCTAGTTTACCCTTTAGGTCAAGCA-AGTTGGTTCTTTGCACCAAGTTTTGGTGTAGCG 60278 Query 73850 GCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCACAATATAACTCTTAATCCATTT 73909 ||||| || |||| || | ||| |||| ||||||||||| |||||||| ||||| Sbjct 60279 GCAATTTTCCGTTTCCTTCTTTTCCTACAAGGTTTCCACAACTGGACTCTTAACCCATTC 60338 Query 73910 CATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCCATACATGGTGCA 73969 || |||||||| ||||| ||||| |||||||| || ||||||||||| || |||||||| Sbjct 60339 CACATGATGGGCGTAGCTGGTATCCTTGGTGGTGCCTTACTATGTGCTATTCATGGTGCG 60398 Query 73970 ACAGTACAGAACACATTGTATGAAGACACATCACAATACACTGAAGGTAAGATTCAATCT 74029 || ||| ||||||| | | ||| || ||| ||| | | Sbjct 60399 ACTGTAGAGAACACTCTTTTCGAA------------------GATGGT--GATGC-TGCG 60437 Query 74030 ACAACTTTCAGAGCATTCGATCCTACACAGGAAGAAGAGACTTATAGTATGATTACTGCT 74089 | |||||| | |||||| ||| ||||| |||||||||||| ||| ||||||| Sbjct 60438 AACACTTTCCGTGCATTCACTCCAACACAATCAGAAGAGACTTACTCAATGGTTACTGCA 60497 Query 74090 AACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACAAAAGATTCTTACACTTC 74149 ||| | |||||||| ||||| |||||| | ||||| || ||||| | | ||||||||| Sbjct 60498 AACCGTTTCTGGTCTCAGATTTTTGGTGTTGCATTCTCTAACAAGCGTTGGTTACACTTC 60557 Query 74150 CTTATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTATAGGTATCGTAGGTCTA 74209 | ||| | |||||||| || |||||||||||| | || ||||| |||||| || Sbjct 60558 TTCATGCTTTTCGTACCAGTAGCTGGTATGTGGACAAGTGCGATCGGTATTGTAGGTTTA 60617 Query 74210 GCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAAGACCCA 74269 ||||| ||||| | |||||||| || || || |||||| | ||||| ||||||||||| Sbjct 60618 GCACTAAACCTGCGTGCATACGATTTCGTTTCGCAAGAGCTTAGAGCCGCAGAAGACCCT 60677 Query 74270 GAGTTTGAAACCTTCTACACTAAGAACATTCTTCTTAATGAAGGTATGAGAGCATGGATG 74329 || || ||||| |||||||| || |||| ||||| ||||||||||| | || |||||| Sbjct 60678 GAATTCGAAACATTCTACACGAAAAACAACCTTCTAAATGAAGGTATCCGTGCGTGGATG 60737 Query 74330 TCATCTGTCGATCAACCCCATGAGAACTTTGTGTTCCCAGAAGAAGTCTTGCCACGAGGC 74389 | | |||||||| ||||| ||||| | ||||| || || || | ||||| || Sbjct 60738 GCTGCACAAGATCAACCTCATGAAAACTTCATCTTCCCTGAGGAGGTACTACCACGTGGA 60797 Query 74390 AACGCACTATAA 74401 ||||| || ||| Sbjct 60798 AACGCCCTTTAA 60809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572849166940960