Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq2411 82.4 6e-11 >seq2411 Length=24813 Score = 82.4 bits (90), Expect = 6e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 ||||| || | || ||||| || || || || ||||| || |||| || |||||| Sbjct 4415 CGCAGAACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCG 4356 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || || ||||| ||| | || | | ||||||||||| || || ||||| ||| Sbjct 4355 TCCTCCAGCTGCTTGCCCGCAAAGATGAGGCGCTGCTGATCCGGGGGGATGCCCTCCTTG 4296 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | || |||||| | || | | ||| ||| | || || ||||| || || Sbjct 4295 TCCTGGATCTTGGCCTTGACATTGTCGATGGAGTCCGAAGGCTCCACCTCAAGGGTGATC 4236 Query 29752 GTTTTGCC 29759 || ||||| Sbjct 4235 GTCTTGCC 4228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385203181141092