Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= NC_023584.1 Length=170438 Score E Sequences producing significant alignments: (Bits) Value seq3345 874 0.0 >seq3345 Length=67807 Score = 874 bits (968), Expect = 0.0 Identities = 811/1025 (79%), Gaps = 3/1025 (0%) Strand=Plus/Minus Query 157037 CTTCGTGGGAATCATTCTGCGAGTGGGTAACTTCCACCAACAACCGTTTGTATGTTGGTT 157096 |||| ||||| |||||||| ||| | ||||| || | ||| | | || |||||| Sbjct 46429 CTTC-TGGGAGCAATTCTGCGCATGGATCACTTCAACTGAGAACAGACTATACATTGGTT 46371 Query 157097 GGTTCGGTGTGCTTATGATTCCAACATTGCTTGCAGCAACTATCTGCTT-CATTGTTGCA 157155 |||||||| || ||| | || || | ||| |||| | | || |||| | || |||| Sbjct 46370 GGTTCGGTTGTCTAATGTTCCCTACTCTACTTACAGCTATT-TCAGCTTACGTTATTGCT 46312 Query 157156 TTCGTAGCAGCACCTCCCGTTGATATCGACGGTATTCGCGAACCAGTTGCTGGTTCTCTC 157215 || | ||||||||||| || |||||||| ||||| || || ||||||||||||||||| Sbjct 46311 TTTATCGCAGCACCTCCAGTAGATATCGATGGTATCCGTGAGCCAGTTGCTGGTTCTCTA 46252 Query 157216 ATGTATGGCAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCAAACGCAATCGGTCTT 157275 | || || |||||||||||||||||||| || ||||| ||||||||| |||||| || Sbjct 46251 CTTTACGGAAACAACATCATCTCTGGTGCTGTAGTTCCAAGTTCAAACGCTATCGGTGTT 46192 Query 157276 CACTTCTACCCCATCTGGGAAGCAGCATCACTTGATGAGTGGCTTTACAACGGTGGTCCT 157335 ||||||||||| ||||||||||| || ||| | ||||||||||| |||||||||||| || Sbjct 46191 CACTTCTACCCAATCTGGGAAGCTGCTTCAATCGATGAGTGGCTATACAACGGTGGTACT 46132 Query 157336 TTCCAACTGGTAGTCTTTCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGG 157395 | |||||| || || || |||||| | || || | | ||| || || || ||||||||| Sbjct 46131 TACCAACTAGTTGTTTTCCACTTCTTCATTGGTGTATGTGCTTACATCGGTCGTGAGTGG 46072 Query 157396 GAACTTTCTTACCGTTTAGGTATGCGCCCCTGGATCTGTGTTGCCTACTCGGCACCAGTC 157455 || |||||||||||| |||||||||| || |||||||||||||| | ||| || ||||| Sbjct 46071 GAGCTTTCTTACCGTCTAGGTATGCGTCCATGGATCTGTGTTGCTTTCTCAGCTCCAGTA 46012 Query 157456 GCTGCTGCGAGTGCAGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCT 157515 ||||| || |||||||||| | |||| || ||||||||||||||||||| |||| | Sbjct 46011 GCTGCAGCATCTGCAGTATTCGTAATCTACCCAATCGGTCAAGGTTCTTTCTCAGATGGT 45952 Query 157516 ATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGCTCGTCTTCCAGGCAGAGCACAAT 157575 |||||||| ||||||||||||||||| |||| ||||| || ||||| || |||||||| Sbjct 45951 ATGCCTCTAGGTATCTCTGGTACTTTCAACTTCATGCTTGTATTCCAAGCTGAGCACAAC 45892 Query 157576 ATTCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTTTGTTC 157635 || |||||||| || ||||||||||| || |||||||| ||||||||||| ||| | ||| Sbjct 45891 ATCCTTATGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCTCTATTC 45832 Query 157636 TCTGCTATGCACGGAAGTCTCGTTACTTCCTCGCTTGTTCGTGAAACAACTGAAACAGAG 157695 || ||||||||||| ||| || ||||| || || | |||||||| ||||| | || Sbjct 45831 TCAGCTATGCACGGTTCTCTAGTAACTTCATCTCTAATCCGTGAAACTACTGAGAACGAA 45772 Query 157696 TCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACGTACAACATCGTTGCTGCA 157755 || ||||| ||||||||||||||||||||||||||||| |||||||||||||| || Sbjct 45771 TCTGCTAACTACGGTTACAAGTTCGGTCAAGAAGAAGAGACTTACAACATCGTTGCAGCT 45712 Query 157756 CACGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCATTCAACAACAGCAGAAGTCTT 157815 ||||||||||| ||||| || |||||||||||||||||||||||||| | ||| Sbjct 45711 CACGGTTACTTAGGTCGTCTATTCTTCCAATACGCTTCATTCAACAACTCACGTGCACTT 45652 Query 157816 CACTTCTTCCTCGCCGCATGGCCTGTTGTCGGCATCTGGTTCACTGCACTGGGCGTAAGC 157875 |||||| |||| | || ||||| || || || |||||||| || | |||| ||| Sbjct 45651 CACTTCGTCCTAGGTGCTTGGCCAGTAGTTGGTATCTGGTTAACATCTATGGGTGTAGCT 45592 Query 157876 ACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGT 157935 || |||||||||||||| ||||||||||||||||||||||| | | ||| || ||| Sbjct 45591 ACTATGGCATTCAACCTAAACGGTTTCAACTTCAACCAGTCAGTTGTAGATTCACAAGGT 45532 Query 157936 CGTGTGTTGAACACCTGGGCAGATGTCCTGAACCGCGCTGGTCTTGGTATGGAAGTTATG 157995 ||||| | ||||| ||||| || | || ||||| | || ||||||||||||||| Sbjct 45531 CGTGTAATCAACACTTGGGCTGACATTCTTAACCGTTCAAACCTAGGTATGGAAGTTATG 45472 Query 157996 CATGAGCGTAACGCACACAACTTCCCACTGGATCTTGCTGCTGCAGAATCAACACCTGTT 158055 || ||||||||||| ||||||||||| || ||||| ||||||| || || ||| ||| Sbjct 45471 CACGAGCGTAACGCTCACAACTTCCCTCTAGATCTAGCTGCTGGTGAGTCTCTACCAGTT 45412 Query 158056 GCACT 158060 || || Sbjct 45411 GCTCT 45407 Score = 594 bits (658), Expect = 6e-165 Identities = 733/1001 (73%), Gaps = 6/1001 (1%) Strand=Plus/Plus Query 158787 GACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTCTA 158846 || |||||||| || || || ||||||||||| ||||| ||||||||||||||||| | Sbjct 59805 GATGACTGGCTAAAGCGTGACCGTTTCGTTTTCGTTGGATGGTCTGGACTTCTTCTATTC 59864 Query 158847 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACGACTTTCGCTACGAGCTGG 158906 || ||| | || ||| | || |||||||| ||||| | ||||||| || ||| Sbjct 59865 CCATGTGCATTCCTAGCTGTAGGTGGTTGGCTAACTGGTATTACTTTCGTAACATCTTGG 59924 Query 158907 TATACACATGGACTCGCTACTTCCTATCTTGAGGGTGCAAACTTTCTTACAGCAGCAGTT 158966 || || || || || || | ||| | || || || ||||| || || || || || Sbjct 59925 TACACTCACGGTCTAGCAAGTTCGTTCCTAGAAGGATGTAACTTCCTAACTGCTGCTGTA 59984 Query 158967 TCGACTCCAGCTGATGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCTCAA 159026 || ||||| ||| | ||||||||| || || || ||| ||||||| ||||| || ||| Sbjct 59985 TCTACTCCTGCTAACAGTATGGGTCACTCACTACTACTTATCTGGGGACCTGAAGCACAA 60044 Query 159027 GGGGATTTCGTCAGGTGGGTCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACGGT 159086 || || || | ||| ||||| |||| || || ||| |||| | || || |||||| Sbjct 60045 GGTGACATCACTCGTTGGTTCCAAATTGGTGGTCTTTGGGCTTTTATTGCACTACACGGT 60104 Query 159087 GCCTTTGCCCTAATTGGTTTCATGCTTCGCCAGTTTGAACTGGCACGTCTCATCGGTATC 159146 | |||| ||||||||||| ||| | |||||||| | || ||| | | ||||| Sbjct 60105 TCGTTTGGTGTAATTGGTTTCTGTCTTAGACAGTTTGAGATCGCTCGTTTAGTAGGTATT 60164 Query 159147 CGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTT 159206 ||||| ||||| || || || ||||||||||| || || || || || | || ||||| Sbjct 60165 CGTCCTTACAACGCAATCGCTTTCTCTGGTCCAATCGCCGTATTCGTTACAGTTTTCCTA 60224 Query 159207 ATCTACCCACTTGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCCGCAATA 159266 | ||||| | ||||| | |||||||| || || || ||||| || || ||||| Sbjct 60225 GTTTACCCTTTAGGTCAAGCAAGTTGGTTCTTTGCACCAAGTTTTGGTGTAGCGGCAATT 60284 Query 159267 TTCAGGTTCCTACTCTTCCTACAAGGGTTCCACAATTGGACACTAAACCCCTTCCATATG 159326 ||| | ||||| || ||||||||||| |||||||| ||||| || ||||| ||||| ||| Sbjct 60285 TTCCGTTTCCTTCTTTTCCTACAAGGTTTCCACAACTGGACTCTTAACCCATTCCACATG 60344 Query 159327 ATGGGAGTTGCTGGTATCCTAGGTGGAGCACTTCTATCTGCTATTCATGGGGTCACAGTT 159386 ||||| || ||||||||||| ||||| || | |||| |||||||||||| | || || Sbjct 60345 ATGGGCGTAGCTGGTATCCTTGGTGGTGCCTTACTATGTGCTATTCATGGTGCGACTGTA 60404 Query 159387 GAAAATACATTATACGAGGATGGAGAACAAGCAAACACCTTTAAGGCGTTTGATTCAACT 159446 || || || | | ||| ||||| || || ||||| || || || | |||| Sbjct 60405 GAGAACACTCTTTTCGAAGATGGTGATGCTGCGAACACTTTCCGTGCATTCACTCCAACA 60464 Query 159447 CAAGAGGAGGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGC 159506 ||| || |||||||| || ||||| ||||||||||| |||||||| ||||| || || Sbjct 60465 CAATCAGAAGAGACTTACTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATTTTTGGT 60524 Query 159507 ATTGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTTATGTTGTTTGTGCCTGTTATGGGT 159566 |||| || ||||||||||| ||| | || ||||| ||| | || || || || ||| Sbjct 60525 GTTGCATTCTCTAACAAGCGTTGGTTACACTTCTTCATGCTTTTCGTACCAGTAGCTGGT 60584 Query 159567 CTATGGACATCCAGT---ATTGGCATTATTGGTCTTGCTCTCAATCTTCGTGCTTACGAT 159623 | |||||| ||| || || ||| | ||| | || || || || ||||| |||||| Sbjct 60585 ATGTGGACA---AGTGCGATCGGTATTGTAGGTTTAGCACTAAACCTGCGTGCATACGAT 60641 Query 159624 TTCGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAAACGTTCTACACCAAG 159683 ||||| |||||| | ||||| |||||||| || ||||| ||||| |||||||| || Sbjct 60642 TTCGTTTCGCAAGAGCTTAGAGCCGCAGAAGACCCTGAATTCGAAACATTCTACACGAAA 60701 Query 159684 AACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCCCATGAA 159743 |||| ||||| |||||||| | ||||| ||| |||| | |||||||| |||||| Sbjct 60702 AACAACCTTCTAAATGAAGGTATCCGTGCGTGGATGGCTGCACAAGATCAACCTCATGAA 60761 Query 159744 AACTTCATCTTCCCAGAAGAAGTTCTACCAAGAGGTAACGC 159784 |||||||||||||| || || || |||||| | || ||||| Sbjct 60762 AACTTCATCTTCCCTGAGGAGGTACTACCACGTGGAAACGC 60802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545250344080960