Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= NC_025456.1 Length=46547 Score E Sequences producing significant alignments: (Bits) Value seq3345 668 0.0 >seq3345 Length=67807 Score = 668 bits (740), Expect = 0.0 Identities = 737/976 (76%), Gaps = 4/976 (0%) Strand=Plus/Minus Query 19514 TGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCG 19573 ||| ||||||| || | ||| | || || |||| ||||| || || ||| | || Sbjct 46407 TGGATCACTTCAACTGAGAACAGACTATACATTGGTTGGTTCGGTTGTCTAATGTTCCCT 46348 Query 19574 TGTCTCCTTGCAGCCACCATCTGCTT-CATTATTGCATTCATTGCGGCTCCACCAGTTGA 19632 ||| ||| |||| | || |||| | ||||||| || || || || || ||||| || Sbjct 46347 ACTCTACTTACAGCTATT-TCAGCTTACGTTATTGCTTTTATCGCAGCACCTCCAGTAGA 46289 Query 19633 CATTGATGGCATCCGCGAACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCATATC 19692 || ||||| ||||| || || || | ||| || ||||| |||||||||||||| || Sbjct 46288 TATCGATGGTATCCGTGAGCCAGTTGCTGGTTCTCTACTTTACGGAAACAACATCATCTC 46229 Query 19693 GGGAGCCGTCGTTCCGAGCAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGC 19752 || || || ||||| || || || ||||| | |||||||||||||| |||||||| Sbjct 46228 TGGTGCTGTAGTTCCAAGTTCAAACGCTATCGGTGTTCACTTCTACCCAATCTGGGAAGC 46169 Query 19753 TAGTTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTT 19812 | |||| | ||||| ||||| |||||||| || | | |||||| || || |||||||| Sbjct 46168 TGCTTCAATCGATGAGTGGCTATACAACGGTGGTACTTACCAACTAGTTGTTTTCCACTT 46109 Query 19813 CCTCATTGGCATCTATGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGAAT 19872 | ||||||| | | ||||||||| || || |||||||| ||| || || ||||| || Sbjct 46108 CTTCATTGGTGTATGTGCTTACATCGGTCGTGAGTGGGAGCTTTCTTACCGTCTAGGTAT 46049 Query 19873 GAGGCCTTGGATTTGTGTTGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTCT 19932 | | || ||||| |||||||| | ||| ||||| || || || || ||||| || || | Sbjct 46048 GCGTCCATGGATCTGTGTTGCTTTCTCAGCTCCAGTAGCTGCAGCATCTGCAGTATTCGT 45989 Query 19933 CGTCTACCCGTTTGGTCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTAC 19992 ||||||| | ||||| ||| ||||| |||| ||||||| | |||||||| ||||| Sbjct 45988 AATCTACCCAATCGGTCAAGGTTCTTTCTCAGATGGTATGCCTCTAGGTATCTCTGGTAC 45929 Query 19993 GTTCAACTACATGTTGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACAT 20052 ||||||| |||| | ||||||||||| || || ||||| || |||||||| |||||||| Sbjct 45928 TTTCAACTTCATGCTTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTCCACAT 45869 Query 20053 GCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGT 20112 ||||||||| ||||||||||||||||| || |||||| || ||||||||||| || || Sbjct 45868 GCTTGGTGTTGCTGGTGTATTCGGTGGTTCTCTATTCTCAGCTATGCACGGTTCTCTAGT 45809 Query 20113 TACGTCCTCGCTTGTGCGTGAGACTACTGAACAGGAAAGTCAGAACTATGGTTACAAGTT 20172 || || || || | ||||| |||||||| | ||| | ||||| ||||||||||| Sbjct 45808 AACTTCATCTCTAATCCGTGAAACTACTGAGAACGAATCTGCTAACTACGGTTACAAGTT 45749 Query 20173 TGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGAT 20232 || |||||||||||||| || |||||||| || ||||| |||||||| || ||| | | Sbjct 45748 CGGTCAAGAAGAAGAGACTTACAACATCGTTGCAGCTCACGGTTACTTAGGTCGTCTATT 45689 Query 20233 CTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCC 20292 ||||||||||||||| |||||||| ||| | || |||||| |||| | ||| ||||| Sbjct 45688 CTTCCAATACGCTTCATTCAACAACTCACGTGCACTTCACTTCGTCCTAGGTGCTTGGCC 45629 Query 20293 GGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGG 20352 || || || || ||||| | | |||| || |||| ||||| || || || ||||| Sbjct 45628 AGTAGTTGGTATCTGGTTAACATCTATGGGTGTAGCTACTATGGCATTCAACCTAAACGG 45569 Query 20353 TTTCAACTTTAACCAGTCCCTTCTCGACA-ACAATGGTCGTGTCATTGATACTTGGGCTG 20411 ||||||||| |||||||| || | || |||| |||||||| || | |||||||||| Sbjct 45568 TTTCAACTTCAACCAGTCAGTTGTAGATTCACAA-GGTCGTGTAATCAACACTTGGGCTG 45510 Query 20412 ACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAACT 20471 ||||||| || ||| | || || || | || || ||||| || || || ||||| |||| Sbjct 45509 ACATTCTTAACCGTTCAAACCTAGGTATGGAAGTTATGCACGAGCGTAACGCTCACAACT 45450 Query 20472 TCCCACTTGACCTTGC 20487 |||| || || || || Sbjct 45449 TCCCTCTAGATCTAGC 45434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148822769829096