Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= NC_025464.1 Length=44147 Score E Sequences producing significant alignments: (Bits) Value seq3345 677 0.0 >seq3345 Length=67807 Score = 677 bits (750), Expect = 0.0 Identities = 730/964 (76%), Gaps = 2/964 (0%) Strand=Plus/Minus Query 18745 ACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCA 18804 || || ||| | || || || || ||||| || || ||| | || ||| ||| || Sbjct 46395 ACTGAGAACAGACTATACATTGGTTGGTTCGGTTGTCTAATGTTCCCTACTCTACTTACA 46336 Query 18805 GCTACTATTTGTTTCATTATTGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGCATC 18864 |||| | || | ||||||| || || || |||||||| ||||| || ||||| ||| Sbjct 46335 GCTATTTCAGCTTACGTTATTGCTTTTATCGCAGCACCTCCAGTAGATATCGATGGTATC 46276 Query 18865 CGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTT 18924 || ||||| ||||| || ||| ||||| |||||||||||||| || || || || ||| Sbjct 46275 CGTGAGCCAGTTGCTGGTTCTCTACTTTACGGAAACAACATCATCTCTGGTGCTGTAGTT 46216 Query 18925 CCGAGCAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGAT 18984 || || || || ||||| | |||||||||||||| ||||||||| |||| | ||| Sbjct 46215 CCAAGTTCAAACGCTATCGGTGTTCACTTCTACCCAATCTGGGAAGCTGCTTCAATCGAT 46156 Query 18985 GAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTC 19044 || ||||| |||||||| || | | |||||| || || ||||||||| ||||||| || Sbjct 46155 GAGTGGCTATACAACGGTGGTACTTACCAACTAGTTGTTTTCCACTTCTTCATTGGTGTA 46096 Query 19045 TATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGGATGCGCCCTTGGATT 19104 | ||||||||| || || |||||||| ||| || || ||||| ||||| || ||||| Sbjct 46095 TGTGCTTACATCGGTCGTGAGTGGGAGCTTTCTTACCGTCTAGGTATGCGTCCATGGATC 46036 Query 19105 TGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTCTTCCTTGTCTATCCATTT 19164 |||||||| | ||||||||| || || ||||| ||||| || ||| | |||| ||| | Sbjct 46035 TGTGTTGCTTTCTCAGCTCCAGTAGCTGCAGCATCTGCAGTATTCGTAATCTACCCAATC 45976 Query 19165 GGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGGTATTAGTGGTACGTTCAACTACATG 19224 ||||||||||| || || | ||||||| | ||||| |||||| ||||||| |||| Sbjct 45975 GGTCAAGGTTCTTTCTCAGATGGTATGCCTCTAGGTATCTCTGGTACTTTCAACTTCATG 45916 Query 19225 CTTGTATTCCAGGCTGAACATAACATCCTCATGCACCCGTTCCACATGCTCGGTGTCGCT 19284 ||||||||||| ||||| || |||||||| |||||||| ||||||||||| ||||| ||| Sbjct 45915 CTTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTCCACATGCTTGGTGTTGCT 45856 Query 19285 GGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTT 19344 ||||| ||||| || || ||||| || ||||||||||| || || || || || || Sbjct 45855 GGTGTATTCGGTGGTTCTCTATTCTCAGCTATGCACGGTTCTCTAGTAACTTCATCTCTA 45796 Query 19345 GTGCGTGAAACTACTGAAGAGGTATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAGAA 19404 | |||||||||||||| | | |||| ||||| || |||||||| || ||||||||| Sbjct 45795 ATCCGTGAAACTACTGAGAACGAATCTGCTAACTACGGTTACAAGTTCGGTCAAGAAGAA 45736 Query 19405 GAGACTTATAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACGCA 19464 |||||||| ||||| ||||| ||||| || || || ||||| || | ||||| ||||| Sbjct 45735 GAGACTTACAACATCGTTGCAGCTCACGGTTACTTAGGTCGTCTATTCTTCCAATACGCT 45676 Query 19465 TCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTGGCCTGTGGTTGGCATT 19524 || |||||||| ||| | || || ||| | | | ||||||||| || ||||| || Sbjct 45675 TCATTCAACAACTCACGTGCACTTCACTTCGTCCTAGGTGCTTGGCCAGTAGTTGGTATC 45616 Query 19525 TGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCAACTTGAATGGCTTTAACTTTAAC 19584 ||||| | | | || ||| || |||||||||||| | || || || ||||| ||| Sbjct 45615 TGGTTAACATCTATGGGTGTAGCTACTATGGCATTCAACCTAAACGGTTTCAACTTCAAC 45556 Query 19585 CAGTCCCTTCTTGACA-ACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCG 19643 ||||| || | || |||| |||||||| || | ||||||||||||||||| || || Sbjct 45555 CAGTCAGTTGTAGATTCACAA-GGTCGTGTAATCAACACTTGGGCTGACATTCTTAACCG 45497 Query 19644 TGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAATGCTCATAACTTCCCACTTGATTT 19703 | | ||||| || | || || |||||||| ||||| ||||| |||||||| || ||| | Sbjct 45496 TTCAAACCTAGGTATGGAAGTTATGCACGAGCGTAACGCTCACAACTTCCCTCTAGATCT 45437 Query 19704 GGCT 19707 ||| Sbjct 45436 AGCT 45433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141143081003496