Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1011 239 6e-57 seq3275 230 3e-54 seq2059 224 1e-52 seq2836 199 6e-45 seq3105 172 8e-37 seq2520 116 5e-20 >seq1011 Length=10758 Score = 239 bits (264), Expect = 6e-57 Identities = 379/535 (71%), Gaps = 10/535 (2%) Strand=Plus/Plus Query 1455743 CGCTTTGTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGA 1455802 || || || || ||||| |||| ||| | | ||||||||||| || ||| || Sbjct 4205 CGTTTCGTGCTCTTCCCGATCCAGTACGGCAAGCTGTGGGAAATGTAT-AAGAAGCACGT 4263 Query 1455803 GGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTGTC 1455862 ||||||||||||||| || |||| | ||||| || | ||| | | ||||| || Sbjct 4264 GGCCTCCTTTTGGACAACCTCGGAGATTGACCTTGGGCCGGACCTGCACGACTGGAA-TC 4322 Query 1455863 G-CTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGC 1455921 | || | | | | |||||| || ||||||| |||||| |||||||| || ||| || Sbjct 4323 GACTTACCAAGGGCGAGCGACACTTCATCACGCACGTGCTCGCCTTCTT-CGCGGCGTCG 4381 Query 1455922 GATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAG 1455981 || |||||||| | |||||| || |||| ||||| || || || |||| ||| Sbjct 4382 GACGGCATCGTTGTCGAGAATCTCGCCGAACGCTTCTGCGCCGACGTGCAGCTGCCCGAG 4441 Query 1455982 GCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCG 1456041 || || | || ||||| ||||||||||| || || ||||||||||| || || ||| Sbjct 4442 GCGCGCTGCTTCTACGGCTTCCAGATCGCGATGGAGAACATCCACTCGGAGACGTACAGC 4501 Query 1456042 CTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATC 1456101 || || |||||||| ||||| | ||| | |||| | | ||||| | || ||| Sbjct 4502 CTGCTCATCGACACGTACGTGAGCGACGATGCCGAGCGGCAGAGGCTCTTCCAGGCGATC 4561 Query 1456102 GACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAG 1456161 || |||||| ||||| | ||||| | ||||||| | || |||||| | || Sbjct 4562 AACGAGGTGCCCGCGGTGCAGGCCAAGGCGGCCTGGGCGCTCAAATGGATCCGC-TCGAA 4620 Query 1456162 GGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGC-CGCGTCGAGGGCATCTTTTTCT 1456220 || || |||||| |||| ||||| || ||||| |||||||||||||||| ||| Sbjct 4621 CGCGTC----CTTTGCGCAGCGCCTCGTGGGGTTTGCATGCGTCGAGGGCATCTTCTTCA 4676 Query 1456221 CGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 ||| |||||||| |||| |||||||||||||||||||||||||| || || Sbjct 4677 GTGGCTCGTTCTGCGCGCTCTTCTGGCTCAAGAAGCGCGGCCTCATGCCGGGGCT 4731 >seq3275 Length=32583 Score = 230 bits (254), Expect = 3e-54 Identities = 566/853 (66%), Gaps = 46/853 (5%) Strand=Plus/Plus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 |||||||||||||||||||||||||| || ||||| || || ||||| || ||| || Sbjct 6388 GGCGGCGGCAAGCGCAAGGGCGCCTTCGCTGTGTACCTCGAGCCATGGCATGCGGACGTC 6447 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 || ||| || || || |||||||||||||||| || || || |||||||| Sbjct 6448 TTCGACTTCCTCGAGCTGCGCAAGAACCACGGCAAGGAAGAGG------CGCGCGCGCGC 6501 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967 || ||||| |||| || ||| | |||||| || ||| ||| | | | || | || Sbjct 6502 GACCTCTTCTACGCGCTCTGGGTGCCCGACCTCTTCATGAAGCGCGTCGAGGCCAACGGC 6561 Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027 || ||||||||||| ||||| |||| |||||||| ||| | | || || ||| Sbjct 6562 GAGTGGTCGCTCTTCTGCCCTGACGAGTGCCCCGGCCTCGTCGACACCCACGGTGCCGCC 6621 Query 262028 TTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCGGACCGTCGTGCCCGCA 262087 || || || || || ||| ||||| | ||||||||| Sbjct 6622 TTCGAGGCGCTGTACGAGCGCTACGAGCGCGAGGGCAAGGCGCGGCGCACCGTGCCCGCG 6681 Query 262088 CGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTC 262147 | ||| | |||| ||| ||| ||| || |||||||| ||||| ||||||||| || Sbjct 6682 CAGCAGCTGTGGTTCAAGATTCTCGAGGCGCAGATCGAGACGGGCACACCCTACATGCTC 6741 Query 262148 TACAAGGACGCCGTCAACCTGACCAG--CAACCAGCAGAACCTGGGCACCA-CGACAGAG 262204 ||||||||||| | |||| | | || |||||||||| |||| ||||| | | | | Sbjct 6742 TACAAGGACGCAGCCAAC--GCCAAGTCCAACCAGCAGCACCTAGGCACGATCCGCTG-C 6798 Query 262205 GCCAACCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGCAAC 262264 ||||||||||||| |||||| | ||| | ||||| ||||| ||||||||| Sbjct 6799 TCCAACCTGTGCACGGAGATCATTGAGTACACCGCGCCCGACGAGGTGGCCGTGTGCAAC 6858 Query 262265 CT---CTCGAGCGTGGCCCTGCCCAAGTTTGTCATCCCCGACCCGCGCGGCGAG------ 262315 || ||||| | || ||||| || || | |||| || |||||| | Sbjct 6859 CTCGCCTCGA---TCGCGCTGCCGCGCTTCGTGCGCGCCGAGGCGGGCGGCGCGCCGGGC 6915 Query 262316 GATCGCAGTG--GCCCATTGGATTCGCG-CTACGACGATG---CCGGCGTGGCCCTGG-- 262367 | |||| | || | ||| | || | | ||||||| ||| |||||| || Sbjct 6916 GGCGGCAGCGGCGCGCCGTGGCTCGACGCCGAGGACGATGGGCCCGAGGTGGCCGCGGCG 6975 Query 262368 ------GCATGGTCTTTGACCATGGCGCCCTCCATGAAGT-TGTCCAG--GCGATGGCGC 262418 || || || || | || |||| | || || | | || || ||| Sbjct 6976 GCCCTCGCGCGG--TTCGATTTCGAGGCACTCC--GGCGTGTGGCGCGCTTCG-TGACGC 7030 Query 262419 GCAACCTCAATCGTGTGATTGACATTAATCACTACCCGGTGCCCGAGGCCCGCCACTCGA 262478 || ||| |||| || || | | ||||||||| |||||||||| ||| |||| | Sbjct 7031 GCTCTCTCGATCGCGTCATCTCGGTGACGCACTACCCGCTGCCCGAGGCACGCAACTCCA 7090 Query 262479 ATCTGCGCCATCGACCGATGGGCGTCGGCGTGCAGGGCCTCGCCGACGTGTTTGCCCTGA 262538 | |||||||| || || || ||||| |||||||| || ||||||||||| || || | | Sbjct 7091 ACCTGCGCCACCGGCCCATTGGCGTGGGCGTGCAAGGTCTCGCCGACGTCTTCGCGCAGC 7150 Query 262539 TGGACCTGCCGTGGGAGAGCGCCGGCGCACGACGTCTCAACCGCGCCATCTTTGAGACGG 262598 || ||| || | ||| | |||||||| |||||||| |||||||| |||||| Sbjct 7151 TGCGCCTCCCCTTCGAGTCCAAAGGCGCACGCGCGCTCAACCGGGCCATCTTCGAGACGC 7210 Query 262599 TCTACCATGCGGC 262611 | ||| | || || Sbjct 7211 TGTACTACGCCGC 7223 Score = 176 bits (194), Expect = 6e-38 Identities = 368/532 (69%), Gaps = 25/532 (5%) Strand=Plus/Plus Query 262872 CGGC-CGCTGGGACTGGGACGCACTGCGGGCGTCGGTT-CGACAGCATGGCCTGCGCAAC 262929 |||| ||||||||||||| ||| || ||| | || |||| ||| || ||||||||| Sbjct 7334 CGGCGCGCTGGGACTGGGCCGCCCTCAAGGCCAAGATTGCGAC-GCACGGGCTGCGCAAC 7392 Query 262930 TCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAG 262989 ||| |||| | |||| ||||||||| || ||||| |||||||||||||||||| |||| Sbjct 7393 TCGCTGCTGCTCGCGCCCATGCCCACCGCGTCGACGGCGCAGATCCTGGGCAACAACGAG 7452 Query 262990 GCGTTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACC 263049 |||||| |||| |||| | ||| |||| ||| |||| ||||||| || Sbjct 7453 TGCTTCGAGCCGTACACGTCCAACCTGTACGCGCGGCGCACGCTCGCGGGCGAGTTCTTT 7512 Query 263050 GTGGTCAACCGCCACCTGGTCAAGCGCATGGT---GGCGCGCGGCCTGTGGACGCCCGAC 263106 ||| |||||| |||||| ||||| | | ||||| |||| |||||| | || Sbjct 7513 GTGCTCAACCCGCACCTG---CAGCGCGAGCTCTCGGCGCTCGGCTTGTGGAGCCGTGAG 7569 Query 263107 TTTCGCGACCGGCTCATTGCGGCACAG-GGCTCGGTGCAG-GGCTTTGACGACGAGGAGG 263164 |||||| |||| | || | | ||||||||| || ||| || | || Sbjct 7570 ACGCGCGACGCCATCATCG-GGAGCGGCGGCTCGGTGGAGCCGCT----CGTCCAG--CT 7622 Query 263165 TGCCGCCCGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACC- 263223 | |||| || || || ||||| |||| ||||||| || | | | | ||| Sbjct 7623 TCCCGCGCG-GCTGCGCGCCGTCTTCCGCACCGCGTGGGAGATG--AAGCAGCGCCACCT 7679 Query 263224 -ATTGATATGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTA 263282 || || ||||| |||||||||| ||| ||||||||||||||||||||||||| | Sbjct 7680 GATCGACATGGCCGCCGACCGCGGCGCCTTCATCGACCAGAGCCAGTCGCTCAACCTCTT 7739 Query 263283 CCTCGCCGACCCGA-CGGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCG 263341 | || || || | | | ||| || ||||||||||| | | | ||| || | Sbjct 7740 CATCAAGGAGCCTACCTTCACCCAGC-TCTCGTCGATGCACTTCCACTCATGGAAGCGTG 7798 Query 263342 GCCTCAAGACTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCAT 263393 |||||||||| || | ||||| |||||||| | |||||| || | ||||| Sbjct 7799 GCCTCAAGACGGGTCTCTACTACCTGCGCACGCAGCCCGCGACCGAGGCCAT 7850 Score = 147 bits (162), Expect = 3e-29 Identities = 195/268 (73%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 259919 GCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTG 259978 |||||||| |||||||| || || ||| | ||||||| |||| |||||||||||| || Sbjct 6124 GCGACGCCGACGCTCTTCAACGCGGGCTCACCGCGCCAGCAGCTTTCGTCGTGCTTCCTA 6183 Query 259979 TTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTC 260038 | || | ||||| |||||||||||||||| ||||||||| |||||||| | | Sbjct 6184 CTCTCCACGCGCGCCGACTCGATCGAGGGCATCTTCGACACGCTCGGCCAGTGCGCCCGC 6243 Query 260039 ATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCC 260098 ||||| | || ||||||||||| | | | ||| |||||||| ||| || | Sbjct 6244 ATCTCGCGCGATGCTGGCGGCATCGGCCTCTCTGTCTCCAACGTGCGCGCGGCGCGCTCG 6303 Query 260099 TACGT-GGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAA 260157 ||| | || | | | |||| || ||||| || |||||||| ||||| || | Sbjct 6304 TACATCCGCTCG-AGCGGCGGCGTCTCGTCGGGCCTCGTCCCCATGCTCCGCGTCTTCGA 6362 Query 260158 CGACACGGCGCGCTACGTCGACCAGTGC 260185 || ||| |||||||||||||||||| || Sbjct 6363 CGCCACCGCGCGCTACGTCGACCAGGGC 6390 >seq2059 Length=13280 Score = 224 bits (248), Expect = 1e-52 Identities = 382/545 (70%), Gaps = 13/545 (2%) Strand=Plus/Minus Query 262872 CGGC-CGCTGGGACTGGGACGCACTGCGGGCGTCGGTTCGACAGCATGGCCTGCGCAACT 262930 |||| ||||||||||||| ||| || ||| | || ||| || || ||||||| Sbjct 5634 CGGCGCGCTGGGACTGGGCCGCCCTCAAGGCCAAGATTGCGGTGCACGGGCTACGCAACT 5575 Query 262931 CGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGG 262990 || ||||||| |||| ||||||||| || |||| |||||||||||||||||| |||| Sbjct 5574 CGCTGCTCGTCGCGCCCATGCCCACCGCGTCGACAGCGCAGATCCTGGGCAACAACGAGT 5515 Query 262991 CGTTCGAGGTCAT-CACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACC 263049 |||||| ||| |||| |||| | ||| ||||||||||| | || ||||| || || Sbjct 5514 GCTTCGAGC-CATACACGTCCAACCTTTACTCGCGCCGCGTGTTGTCCGGCGAGTTCACG 5456 Query 263050 GTGGTCAACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGACGCCCGACTTT 263109 || || |||| |||||| ||||| || ||| || | | |||||||||| || || Sbjct 5455 GTCGTTAACCAGCACCTGCTCAAGGATCTGATGGATCGGGACTTGTGGACGCCGGAGATT 5396 Query 263110 CGCGACCGGCTCATTGCGGCAC-AGGGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCC 263168 ||| ||| | |||| || |||| | || ||||||||| | | ||| | || Sbjct 5395 CGCAACCAGATCATCGC-GCACAACGGTTCGGTGCAG------CAGATCCCCGAGATCCC 5343 Query 263169 GCCCGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCATTGA 263228 | ||||| ||||| |||| | || |||||| | | || | ||| || Sbjct 5342 GGCCGATGTCAAGATGCTCTACCGCACATCGTGGGAAATCAAGCAGCGCTCGCTCATCGA 5283 Query 263229 TATGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGC 263288 |||||| |||||||||| ||| |||||||||||||| ||||| | | | | Sbjct 5282 TATGGCCGCCGACCGCGGCGCCTTCATCGACCAGAGCCAGAGCTTCAACGTATTCGTGCA 5223 Query 263289 CGACCCG-ACGGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCCTCA 263347 |||||| || | | ||| || |||||||||| ||| | ||| ||||||| Sbjct 5222 GGACCCGAACTACGGCAAGC-TCTCGTCGATGCATTTCTACGGATGGAAGAAGGGCCTCA 5164 Query 263348 AGACTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCACCGTCG 263407 |||| ||||||||||| ||||| || | | || ||| ||||||| |||||||||||| Sbjct 5163 AGACGGGCATGTACTACCTGCGTTCCAAGGCAGCGGCCGACGCCATCAAATTCACCGTCG 5104 Query 263408 ATCAG 263412 | ||| Sbjct 5103 ACCAG 5099 Score = 156 bits (172), Expect = 6e-32 Identities = 320/481 (67%), Gaps = 8/481 (2%) Strand=Plus/Minus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 ||||| |||||||| ||||| | || ||| ||||| || |||||||||| ||| || Sbjct 6499 GGCGGTGGCAAGCGGCAGGGCTCGTTCGCCGTGTACCTCGAGCCGTGGCACGGAGACATC 6440 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 || || || || |||||||||||||||||||||| || || || ||||||| Sbjct 6439 TTCGCCTTCCTCGATCTCAAAAAGAACCACGGCAAGGAAGAGG------CGCGCGCGCGT 6386 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967 || ||||| |||| || ||| | |||||| || ||| || | | | || | | Sbjct 6385 GACCTCTTCTACGCGCTCTGGGTGCCCGACCTCTTCATGAAACGTGTCGAGGCCAACGCC 6326 Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027 || |||||||| | ||||| || || || || |||| ||| ||||| | | Sbjct 6325 GAGTGGTCGCTGCTCTGCCCCAATGAATGCCCGGGGCTCTACGACAGCTGGGGCGCCGAC 6266 Query 262028 TTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCGGACCGTCGTGCCCGCA 262087 || || || || || ||| ||||| | ||| ||| Sbjct 6265 TTCGAGGCGCTGTACGAGGGGTACGAGAAGGAGGGCAAGGCGCGGCGCACCGTCAAAGCA 6206 Query 262088 CGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTC 262147 | | | |||| |||||| ||| | || |||||||| |||||||| ||||| | Sbjct 6205 CAGGACCTGTGGTTCGCCATTCTCGACTCGCAGATCGAGACGGGCACGCCGTACATCCTG 6146 Query 262148 TACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA-CGACAGAGGC 262206 ||||||||||||| ||| | | ||||||||||||||||||||| | | | | | Sbjct 6145 TACAAGGACGCCGCCAATCGCAAGTCCAACCAGCAGAACCTGGGCACGATCCGCTG-CTC 6087 Query 262207 CAACCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGCAACCT 262266 |||||||||||| |||||| || ||| | |||||| |||| ||||||||||| Sbjct 6086 CAACCTGTGCACGGAGATCATCGAGTACACCTCGCCCGATGAGGTGGCAGTGTGCAACCT 6027 Query 262267 C 262267 | Sbjct 6026 C 6026 Score = 147 bits (162), Expect = 3e-29 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 262416 CGCGCAACCTCAATCGTGTGATTGACATTAATCACTACCCGGTGCCCGAGGCCCGCCACT 262475 ||||||||||||| ||||| || || | || ||||||||||||||||||| ||| ||| Sbjct 5940 CGCGCAACCTCAACCGTGTCATCGATAACAACTACTACCCGGTGCCCGAGGCGCGCAACT 5881 Query 262476 CGAATCTGCGCCATCGACCGATGGGCGTCGGCGTGCAGGGCCTCGCCGACGTGTTTGCCC 262535 | || ||||||| || ||| | ||| ||||||||||||| ||||||||||||||| || Sbjct 5880 CTAACATGCGCCACCGGCCGGTTGGCCTCGGCGTGCAGGGTCTCGCCGACGTGTTTATCC 5821 Query 262536 TGATGGACCTGCCGTGGGAGAGCGCCGGCGCACGACGTCTCAACCGCGCCATCTTTGAGA 262595 || | | ||||||| || ||| | ||||| |||||| || || || |||| Sbjct 5820 TGCTCAAGCTGCCGTTCGACTGCGAGGCTGCACGGGCGCTCAACACCGAGATTTTCGAGA 5761 Query 262596 CGGTCTACCATGCGGCGGCGACGGCGTCG 262624 | ||||| | ||||| | |||||||| Sbjct 5760 CCATCTACTACGCGGCCGTCTCGGCGTCG 5732 Score = 143 bits (158), Expect = 4e-28 Identities = 201/282 (71%), Gaps = 0/282 (0%) Strand=Plus/Minus Query 259894 CATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCG 259953 |||||| || || |||||| || |||| || | || || || |||||||| Sbjct 6788 CATGTCAGAGAGGTGGTTCACGCACGCCTCGCCGACCATGTTCAACGCGGGCACGCCCAA 6729 Query 259954 CCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTA 260013 ||||||| ||||||||||| || | |||| || ||| || |||||||||||||| Sbjct 6728 GCCGCAGATGTCGTCGTGCTTCCTCCTCTCCATGGTGGACGACTCCATCGAGGGCATCTA 6669 Query 260014 TGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGC 260073 | |||||| |||| ||||||||||||||| |||||||| || ||| | || | ||| Sbjct 6668 CGCCACGCTGAAGCGGTGCGCGCTCATCTCGAAGGCGGCGGGTGGCGTTGGAATCAGCGC 6609 Query 260074 ACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCT 260133 ||| | || || |||| |||| | || ||||||||| ||||| || || Sbjct 6608 GAGCAATATTCGTGCGTCGGGAAGCTACATTCGCGGTACCAACGGCACCTCCAATGGGCT 6549 Query 260134 TGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGT 260175 | || ||||| ||||| || ||| |||||||||||| ||| Sbjct 6548 CATCCCGATGCTGCGCGTCTTCAACAACACGGCGCGCTTCGT 6507 >seq2836 Length=15749 Score = 199 bits (220), Expect = 6e-45 Identities = 388/552 (70%), Gaps = 27/552 (5%) Strand=Plus/Minus Query 262872 CGGC-CGCTGGGACTGGGACGCACTGCGGGCGTCGGTT-CGACAGCATGGCCTGCGCAAC 262929 |||| ||||||||||||| ||| || ||| | || ||| ||| || || |||||| Sbjct 8249 CGGCGCGCTGGGACTGGGCCGCCCTCAAGGCCAAGATTGCGAT-GCACGGGCTACGCAAC 8191 Query 262930 TCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAG 262989 ||| |||| | |||| ||||||||| || ||||| |||||||||||||||||| |||| Sbjct 8190 TCGCTGCTGCTCGCGCCCATGCCCACCGCGTCGACGGCGCAGATCCTGGGCAACAACGAG 8131 Query 262990 GCGTTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACC 263049 |||||| |||| |||| | ||| | |||||||| ||| | ||||| || | Sbjct 8130 TGCTTCGAGCCGTACACGTCCAACCTGTACTCTCGCCGCGTACTCGCTGGCGAGTTCGCG 8071 Query 263050 GTGGTCAACCGCCACCTGGTCAAGCG-CATGGTGGCGCGCGGCCTGTGGAC--GCCCGAC 263106 |||||||||| ||||| || ||| | || ||| ||||||||| ||||| ||| Sbjct 8070 GTGGTCAACCAGCACCT-GTTGCGCGACCTGATGGAGCGCGGCCTCTGGACAGAGTCGA- 8013 Query 263107 TTTCGCGACCGGCTCATTGCGGCAC-AGGGCTCGGTGCAGGGCTTTGACGACGAGGAGGT 263165 | ||| ||| | |||| || |||| | |||||||||||| | || | ||| | Sbjct 8012 -TCCGCAACCAGATCATCGC-GCACAACGGCTCGGTGCAGCG----GA--TCCCCGAGAT 7961 Query 263166 GCCGCCCGATCTCAAGGCTCTCTTCAAGACCGTG-TGGGAGGTGCCCAACCGGGTGAC-C 263223 || ||| ||||| |||| | | |||| |||||| | | | | | || | Sbjct 7960 CCCCGACGACCTCAAACTGCTCTAC-CGTACGTGCTGGGAGCT-CAAGATGCGCTCACTC 7903 Query 263224 ATTGATATGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTAC 263283 || || ||||| |||||||||| | | ||||||| ||||||||| ||||| ||| | Sbjct 7902 ATCGACATGGCCGCCGACCGCGGCGCGTTCATCGACCAAAGCCAGTCGTTCAACGTGTTC 7843 Query 263284 CTCGCCGA-CCCGAC--GGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGC 263340 | |||| ||| || ||| || || ||||||||||| ||| | ||| Sbjct 7842 ATGACCGAGCCCAACTATGCCAAG---CTCTCGTCGATGCACTTCTACGGCTGGAAGAAG 7786 Query 263341 GGCCTCAAGACTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTC 263400 ||||||||||| ||||||||||| |||||||| || |||| || | || || | ||| Sbjct 7785 GGCCTCAAGACGGGCATGTACTACCTGCGCACGCGCGCCGCCGCGGATGCGATCAAGTTC 7726 Query 263401 ACCGTCGATCAG 263412 |||||||| ||| Sbjct 7725 ACCGTCGACCAG 7714 Score = 199 bits (220), Expect = 6e-45 Identities = 333/483 (69%), Gaps = 12/483 (2%) Strand=Plus/Minus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 |||||||||||||||||||||||||| ||| ||||| || || ||||| || ||| | Sbjct 9120 GGCGGCGGCAAGCGCAAGGGCGCCTTCGCCGTGTACCTCGAGCCATGGCATGCGGACGTG 9061 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 | ||| || ||||| || ||||| |||||||| ||||| || || |||||||| Sbjct 9060 TGCGACTTTCTTGACCTGAAGAAGAATCACGGCAA-GGAGGAGG-----CGCGCGCGCGC 9007 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGC--GACCTGTTTATGCGCCGCATGGTGACCGGCC 261965 || ||||| |||| || ||| |||| ||||| || ||| ||| | | | || | Sbjct 9006 GACCTCTTCTACGCTCTCTGG--GTGCCTGACCTCTTCATGAAGCGCGTCGAGGCCAACG 8949 Query 261966 GCGACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGG 262025 |||||||||||||| | |||||| |||| || || || ||| ||| |||| || Sbjct 8948 GCGACTGGTCGCTCATGTGCCCGCACGAGTGCCCTGGTCTCGTCGACAGCTGGGGCGAGG 8889 Query 262026 CCTTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCGGACCGTCGTGCCCG 262085 ||||||| || || || |||| | |||||||| Sbjct 8888 CCTTTGAGGCTCTGTACACCCAGTACGAGAAAGAGGGCAAGGCGCGAAAGAGCGTGCCCG 8829 Query 262086 CACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGG 262145 | | ||| | |||| |||| ||| | || |||||||| |||||||| ||||| Sbjct 8828 CGCAGCAGCTGTGGTTCACCATCCTCGACTCGCAGATCGAGACGGGCACGCCGTACATCC 8769 Query 262146 TCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA-CGACAGAG 262204 | ||||||||||||| ||||| | ||||||||||||||| ||||| | | | | Sbjct 8768 TGTACAAGGACGCCGCCAACCGCAAGTCCAACCAGCAGAACCTTGGCACGATCCGCTG-C 8710 Query 262205 GCCAACCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGCAAC 262264 |||||||||||||||||||| || ||| | ||||| ||||| ||||||||| Sbjct 8709 TCCAACCTGTGCACCGAGATCATCGAGTACACCTCGCCGGACGAGGTCGCCGTGTGCAAC 8650 Query 262265 CTC 262267 ||| Sbjct 8649 CTC 8647 Score = 179 bits (198), Expect = 5e-39 Identities = 331/476 (70%), Gaps = 21/476 (4%) Strand=Plus/Minus Query 259713 ACGGCCGAGACTTTGGCTACTCGTACTTTGGTCTGGCGAC-CTTGCGCCGGTCCTACCTG 259771 ||| ||| ||||||| |||| |||||||| | ||| || | | | || |||||| Sbjct 9575 ACGACCGCGACTTTGACTACGACTACTTTGGCTTCAAGACTCTCGAGAAG-TCGTACCTG 9517 Query 259772 ACCAAAGTGCGCGATATTGTCGTCGAGCGGCCCCAGTATATGCTCATGCGTGTCGCCCTT 259831 ||| ||| | | | || ||||||||||| ||| | ||||||||||| || | | || Sbjct 9516 CTCAAGATGCACAACAAGGTGGTCGAGCGGCCGCAGCAGATGCTCATGCGCGT-GTCGTT 9458 Query 259832 GGCCATTATGGGTTTGC-CGACGTCGACAATGCGCTGGAGCACGTGCTCGCCACCT-ACG 259889 || ||| || |||| | || ||| | ||| |||| | ||||| | | Sbjct 9457 GGGCATCCACCA---GCACGACCTGGATGCGGCGATTGAG-ACGTAC----CACCTGATG 9406 Query 259890 AGGCCATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGC 259949 || || ||| | |||||| |||||||||||| | || || || ||||||| Sbjct 9405 AG-------CG-AGCGCTGGTTCACGCACGCGACGCCCACGATGTTCAACGCGGGCACGC 9354 Query 259950 CGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCA 260009 ||| ||||||| || |||||||| ||| | ||||||| || ||||||||||||| Sbjct 9353 CGCAGCCGCAGATGTCCTCGTGCTTCCTGCTCTCGATGAAGGAGGACTCGATCGAGGGCA 9294 Query 260010 TCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTG 260069 ||| || |||||||| | |||||||| || |||||| || || |||||||| | | Sbjct 9293 TCTTCGAGACGCTCAAACTGTGCGCGCAGATATCCAAGAGCGCGGGTGGCATCGGCGTGG 9234 Query 260070 CCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACG 260129 | | ||| | |||||| |||| | ||| | |||||| |||| | ||||| Sbjct 9233 CGGTGACCAACATCCGCGCCAAGGGCTCGTACATCAAGGGCACGGGCGGCACGAGCAACG 9174 Query 260130 GCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAGTGC 260185 |||| || |||||||| ||||| | || |||| |||||||||||||||||| || Sbjct 9173 GCCTCGTTCCCATGCTGCGCGTGTACGACAACACTGCGCGCTACGTCGACCAGGGC 9118 >seq3105 Length=38015 Score = 172 bits (190), Expect = 8e-37 Identities = 187/247 (76%), Gaps = 6/247 (2%) Strand=Plus/Plus Query 724896 TCGTACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCA 724955 |||||||| || | ||||||||||||||||||||||||||||| |||| || Sbjct 14614 TCGTACTCCTCGTACATCTACAAGGTGCTCAAGCAGGTGCACCCGGACACCGG-----CA 14668 Query 724956 TCCTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATC 725015 || || |||| |||||||||||||||||||||| |||||||| |||| |||||| Sbjct 14669 TC-TCGTCCAAGGCCATGTCGATCATGAACTCGTTCATCAACGACGCCTTCGAGCGCATC 14727 Query 725016 GGCACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAG 725075 | | ||||| || || | ||||| ||||||| ||| | | |||||||| Sbjct 14728 GCCGTTGAGGCGGGCAAGCTCGTGCGCTACAACAAGAAGGGCACCCTGTCCTCGCGCGAG 14787 Query 725076 ATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAG 725135 ||||||||||| |||||||| ||| | | || || || |||| |||||||||||| ||| Sbjct 14788 ATCCAGACCGCTGTGCGCCTCATCCTCCCTGGTGAGCTCGCCAAGCACGCCGTCTCGGAG 14847 Query 725136 GGCACCA 725142 ||||||| Sbjct 14848 GGCACCA 14854 >seq2520 Length=28673 Score = 116 bits (128), Expect = 5e-20 Identities = 255/374 (68%), Gaps = 10/374 (3%) Strand=Plus/Plus Query 332965 TTCCATGGTCGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAG 333024 |||||| || ||| | ||||| || ||| || ||| | |||| |||||||| || Sbjct 21404 TTCCATCGTGCGCCGCATCGCCTGCTGCGCCCCCTCCGTCATCGAGTCCGCCTCGTCCAG 21463 Query 333025 GATGATGATCTTGTGGC-GCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGA 333083 ||||||||||||||| ||||| | ||||| ||| | ||| || |||| Sbjct 21464 GATGATGATCTTGTGCTTGCCCGGG-GGCAGCGTCACCTTCTTCTGCGCAAACGCCTTGA 21522 Query 333084 TGATCTTGCGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCT 333143 || |||||| || || | ||| || ||||| || || || || || |||||||| | Sbjct 21523 TGCGACCGCGCACCACCTCGATGCCACGATCGTCGGAGGCATTCAGCTCAAGCACGGCTT 21582 Query 333144 CGTCGGCGGCCGCACCCAAGAGGA-CG--CGCGCCAGGCACGCG-ATGCTCGTGGTCTTG 333199 | | | ||| | || ||| | || ||||| || | || | | ||| ||||| ||| Sbjct 21583 CCTTGAAGGCATCTCC---GAGCATCGTTCGCGCGAG-CGCGAGCACGCTAGTGGTTTTG 21638 Query 333200 CCCGTGCCGGGCGGACCCGCCAGCAAGAGGTTGGGCATGTTGCCGTCGGCGGCCAGCGCC 333259 || || || || || |||| || | || |||||||||||||| | |||||| || Sbjct 21639 CCAGTACCCGGTGGCCCCGAGAGGATCAGATTGGGCATGTTGCCCTGCTGTGCCAGCACC 21698 Query 333260 TTGAGGTAGGCAACGGCGTGCTCGTTGCCGACAATGTCGTCGAGCACCATTGGGCGGTAC 333319 | || | || | | ||||||||| || | ||| || | |||| | || |||||| Sbjct 21699 TGCAGCCGCCCGACCGTATCCTCGTTGCCCACGACGTCCTCCATCACCCTCGGCCGGTAC 21758 Query 333320 TTTTCGATCCATGG 333333 ||||||| |||||| Sbjct 21759 TTTTCGAGCCATGG 21772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177482106328744