Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= NC_026928.1 Length=189418 Score E Sequences producing significant alignments: (Bits) Value seq3345 841 0.0 >seq3345 Length=67807 Score = 841 bits (932), Expect = 0.0 Identities = 813/1040 (78%), Gaps = 3/1040 (0%) Strand=Plus/Minus Query 177835 CTTCGTGGGAATCATTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTT 177894 |||| ||||| |||||||| ||| | ||||| || | ||| | || || | |||| Sbjct 46429 CTTC-TGGGAGCAATTCTGCGCATGGATCACTTCAACTGAGAACAGACTATACATTGGTT 46371 Query 177895 GGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACTATCTGTTT-CATCGTCGCC 177953 ||||||| || ||| | || ||||| | |||| | | || | || | | | || Sbjct 46370 GGTTCGGTTGTCTAATGTTCCCTACTCTACTTACAGCTATT-TCAGCTTACGTTATTGCT 46312 Query 177954 TTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTC 178013 || |||| || || || || || ||||| || |||||||| || || |||||||| || Sbjct 46311 TTTATCGCAGCACCTCCAGTAGATATCGATGGTATCCGTGAGCCAGTTGCTGGTTCTCTA 46252 Query 178014 ATGTATGGCAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTT 178073 | || || |||||||||||||||||||| || |||||| ||| ||||| || ||| || Sbjct 46251 CTTTACGGAAACAACATCATCTCTGGTGCTGTAGTTCCAAGTTCAAACGCTATCGGTGTT 46192 Query 178074 CACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCT 178133 |||||||| || ||||||||||| || ||| | ||||||||||| || ||||||||| || Sbjct 46191 CACTTCTACCCAATCTGGGAAGCTGCTTCAATCGATGAGTGGCTATACAACGGTGGTACT 46132 Query 178134 TTCCAACTCGTAGTATTTCACTTCCTCATTGGTATCTATGCATACATGGGACGTGAGTGG 178193 | |||||| || || || |||||| |||||||| | | ||| ||||| || ||||||||| Sbjct 46131 TACCAACTAGTTGTTTTCCACTTCTTCATTGGTGTATGTGCTTACATCGGTCGTGAGTGG 46072 Query 178194 GAACTTTCATACCGTTTAGGTATGCGCCCCTGGATCTGTGTAGCATACTCTGCTCCAGTA 178253 || ||||| |||||| |||||||||| || ||||||||||| || | ||| ||||||||| Sbjct 46071 GAGCTTTCTTACCGTCTAGGTATGCGTCCATGGATCTGTGTTGCTTTCTCAGCTCCAGTA 46012 Query 178254 GCAGCAGCATCGGCAGTATTCCTGGTCTATCCTTTCGGTCAAGGTTCATTTTCTGACGCA 178313 || |||||||| ||||||||| | |||| || ||||||||||||| || || || | Sbjct 46011 GCTGCAGCATCTGCAGTATTCGTAATCTACCCAATCGGTCAAGGTTCTTTCTCAGATGGT 45952 Query 178314 ATGCCACTTGGCATCTCTGGTACATTCAACTACATGCTTGTTTTCCAAGCAGAACACAAC 178373 ||||| || || ||||||||||| ||||||| ||||||||| |||||||| || |||||| Sbjct 45951 ATGCCTCTAGGTATCTCTGGTACTTTCAACTTCATGCTTGTATTCCAAGCTGAGCACAAC 45892 Query 178374 ATTCTGATGCACCCCTTCCACATGTTGGGTGTCGCAGGTGTATTCGGTGGTTCACTGTTC 178433 || || |||||||| ||||||||| | ||||| || ||||||||||||||||| || ||| Sbjct 45891 ATCCTTATGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCTCTATTC 45832 Query 178434 AGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTTCGTGAAACGACTGAAACAGAA 178493 || |||||||||||| | || || || || || | |||||||| ||||| | ||| Sbjct 45831 TCAGCTATGCACGGTTCTCTAGTAACTTCATCTCTAATCCGTGAAACTACTGAGAACGAA 45772 Query 178494 TCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAGACATACAACATCGTTGCAGCA 178553 || ||||| ||||| |||||||| |||||||||||||| ||||||||||||||||| Sbjct 45771 TCTGCTAACTACGGTTACAAGTTCGGTCAAGAAGAAGAGACTTACAACATCGTTGCAGCT 45712 Query 178554 CATGGCTACTTCGGTCGTTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTG 178613 || || ||||| |||||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 45711 CACGGTTACTTAGGTCGTCTATTCTTCCAATACGCTTCATTCAACAACTCACGTGCACTT 45652 Query 178614 CACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTAAGC 178673 |||||| |||| | || ||||| |||||||| |||||||| || | |||| ||| Sbjct 45651 CACTTCGTCCTAGGTGCTTGGCCAGTAGTTGGTATCTGGTTAACATCTATGGGTGTAGCT 45592 Query 178674 ACCATGGCATTTAACCTCAATGGATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGA 178733 || |||||||| ||||| || || ||||||||||||||||| | | || |||||| Sbjct 45591 ACTATGGCATTCAACCTAAACGGTTTCAACTTCAACCAGTCAGTTGTAGATTCACAAGGT 45532 Query 178734 CGTGTCCTCAACACATGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATG 178793 ||||| ||||||| ||||| ||| | || |||||| | || || |||||||| ||| Sbjct 45531 CGTGTAATCAACACTTGGGCTGACATTCTTAACCGTTCAAACCTAGGTATGGAAGTTATG 45472 Query 178794 CACGAGCGCAACGCGCACAACTTCCCGCTTGATCTTGCAGCAGCTGAGTCCACACCTGTG 178853 |||||||| ||||| ||||||||||| || ||||| || || | |||||| ||| || Sbjct 45471 CACGAGCGTAACGCTCACAACTTCCCTCTAGATCTAGCTGCTGGTGAGTCTCTACCAGTT 45412 Query 178854 GCCTTAATTGCTCCTTCTGT 178873 || || ||||||| |||| Sbjct 45411 GCTCTAGTTGCTCCAGCTGT 45392 Score = 531 bits (588), Expect = 6e-146 Identities = 726/1011 (72%), Gaps = 2/1011 (0%) Strand=Plus/Plus Query 179223 TTCGATGTCCTGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGA 179282 |||||| | | || |||||| | || || || || || || || || || ||||||||| Sbjct 59793 TTCGATCTTATTGATGACTGGCTAAAGCGTGACCGTTTCGTTTTCGTTGGATGGTCTGGA 59852 Query 179283 CTCCTACTTCTTCCCA-CTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTT 179341 || || | | |||||| ||| | || || | || |||||||| ||||| | |||| Sbjct 59853 CTTCTTC-TATTCCCATGTGCATTCCTAGCTGTAGGTGGTTGGCTAACTGGTATTACTTT 59911 Query 179342 TGTTACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTATCTTGAGGGTGCTAACTTTCT 179401 || || ||||||||| |||||||| || ||||| | || || || |||||| || Sbjct 59912 CGTAACATCTTGGTACACTCACGGTCTAGCAAGTTCGTTCCTAGAAGGATGTAACTTCCT 59971 Query 179402 TACGGCAGCTGTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGG 179461 || || ||||| || || |||||| | ||||||||| || || || || | ||||| Sbjct 59972 AACTGCTGCTGTATCTACTCCTGCTAACAGTATGGGTCACTCACTACTACTTATCTGGGG 60031 Query 179462 TCCTGAGTCTCAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGT 179521 ||||| | || || | || || |||| |||| |||| || || ||| ||| | Sbjct 60032 ACCTGAAGCACAAGGTGACATCACTCGTTGGTTCCAAATTGGTGGTCTTTGGGCTTTTAT 60091 Query 179522 GGCTCTCCACGGTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAACTTGCTCG 179581 || || |||||| | || | | | ||||||||| ||||| || ||||| | ||||| Sbjct 60092 TGCACTACACGGTTCGTTTGGTGTAATTGGTTTCTGTCTTAGACAGTTTGAGATCGCTCG 60151 Query 179582 CCTGATTGGTATCAGACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGT 179641 | | ||||| | |||||||| || || ||||| |||||||| || || |||||||| Sbjct 60152 TTTAGTAGGTATTCGTCCTTACAACGCAATCGCTTTCTCTGGTCCAATCGCCGTATTCGT 60211 Query 179642 CAGTGTTTTCCTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGG 179701 | |||||||| | || ||||| || || | |||||| || || || ||||| Sbjct 60212 TACAGTTTTCCTAGTTTACCCTTTAGGTCAAGCAAGTTGGTTCTTTGCACCAAGTTTTGG 60271 Query 179702 TGTCGCGGCGATCTTCAGGTTCTTGCTGTTCCTTCAGGGTTTCCACAACTGGACGCTCAA 179761 ||| ||||| || ||| | ||| | || ||||| || ||||||||||||||||| || || Sbjct 60272 TGTAGCGGCAATTTTCCGTTTCCTTCTTTTCCTACAAGGTTTCCACAACTGGACTCTTAA 60331 Query 179762 CCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTGCTCAGTGCTATCCA 179821 ||| ||||| |||||||| || |||||||| || || || || | || ||||||| || Sbjct 60332 CCCATTCCACATGATGGGCGTAGCTGGTATCCTTGGTGGTGCCTTACTATGTGCTATTCA 60391 Query 179822 TGGAGTTACTGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAATACCTTTAAGGC 179881 ||| | ||||||||||| || | | |||||||| || || || || || || Sbjct 60392 TGGTGCGACTGTAGAGAACACTCTTTTCGAAGATGGTGATGCTGCGAACACTTTCCGTGC 60451 Query 179882 GTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTC 179941 || | | ||||| |||||||||||| || ||||| ||||||||||| |||||||| Sbjct 60452 ATTCACTCCAACACAATCAGAAGAGACTTACTCAATGGTTACTGCAAACCGTTTCTGGTC 60511 Query 179942 GCAGATCTTCGGTATTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGT 180001 ||||| || ||| ||||||| ||||||||||| ||| | || || |||||| | || || Sbjct 60512 TCAGATTTTTGGTGTTGCATTCTCTAACAAGCGTTGGTTACACTTCTTCATGCTTTTCGT 60571 Query 180002 GCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCG 180061 || || ||| | |||||| | || || ||| | ||| | || || ||||| || Sbjct 60572 ACCAGTAGCTGGTATGTGGACAAGTGCGATCGGTATTGTAGGTTTAGCACTAAACCTGCG 60631 Query 180062 TGCTTACGATTTCGTAAGTCAGGAGATCAGAGCAGCAGAAGATCCCGAGTTTGAGACCTT 180121 ||| ||||||||||| || ||| | ||||| |||||||| || || || || || || Sbjct 60632 TGCATACGATTTCGTTTCGCAAGAGCTTAGAGCCGCAGAAGACCCTGAATTCGAAACATT 60691 Query 180122 CTACACCAAGAACATTCTTCTCAATGAAGGACTACGTGCATGGTTGGCACCAGTTGATCA 180181 |||||| || |||| ||||| |||||||| | ||||| ||| |||| || ||||| Sbjct 60692 CTACACGAAAAACAACCTTCTAAATGAAGGTATCCGTGCGTGGATGGCTGCACAAGATCA 60751 Query 180182 ACCACATGAGTCATTCGTATTCCCAGAAGAAGTTCTGCCAAGAGGTAATGC 180232 ||| ||||| ||| | ||||| || || || || ||| | || || || Sbjct 60752 ACCTCATGAAAACTTCATCTTCCCTGAGGAGGTACTACCACGTGGAAACGC 60802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605983753690560